Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s91.

Sample reads: 391,651. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 10144.71 25902.56 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. HIST1H4C ENSG00000197061 8811.81 22499.26 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
3. EEF1A1 ENSG00000156508 4575.36 11682.30 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
4. RPS27 ENSG00000177954 4499.49 11488.58 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
5. PTMA ENSG00000187514 2931.37 7484.69 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
6. RPS12 ENSG00000112306 2832.73 7232.83 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
7. TUBA1B ENSG00000123416 2506.46 6399.76 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
8. RPL31 ENSG00000071082 2271.24 5799.17 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
9. SFRP1 ENSG00000104332 2233.30 5702.30 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
10. RPL37 ENSG00000145592 2228.24 5689.38 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
11. RPL10A ENSG00000198755 2149.84 5489.20 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
12. RPL5 ENSG00000122406 2096.72 5353.57 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
13. PPIA ENSG00000196262 2036.02 5198.58 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
14. RPS23 ENSG00000186468 1993.03 5088.82 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
15. ACTB ENSG00000075624 1950.03 4979.03 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
16. ACTG1 ENSG00000184009 1793.22 4578.64 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
17. RPL34 ENSG00000109475 1775.51 4533.42 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
18. RPL15 ENSG00000174748 1613.64 4120.12 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
19. MALAT1 ENSG00000251562 1578.23 4029.71 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
20. HMGA2 ENSG00000149948 1563.06 3990.97 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
21. MTRNR2L1 ENSG00000256618 1552.94 3965.13 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
22. MTRNR2L8 ENSG00000255823 1525.12 3894.10 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
23. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1502.36 3835.99 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
24. RPS15A ENSG00000134419 1456.83 3719.73 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
25. GNAS ENSG00000087460 1436.60 3668.08 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
26. HMGB1 ENSG00000189403 1434.07 3661.62 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
27. RPL23 ENSG00000125691 1421.42 3629.32 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
28. RPS20 ENSG00000008988 1348.08 3442.06 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
29. COL3A1 ENSG00000168542 1307.61 3338.73 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
30. RPS6 ENSG00000137154 1300.02 3319.35 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
31. TPT1 ENSG00000133112 1289.90 3293.51 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
32. RPL11 ENSG00000142676 1274.73 3254.78 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
33. HNRNPC ENSG00000092199 1259.55 3216.02 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
34. RPS3A ENSG00000145425 1251.96 3196.64 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
35. RPS27A ENSG00000143947 1176.09 3002.92 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
36. RPL30 ENSG00000156482 1165.97 2977.08 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
37. NPM1 ENSG00000181163 1077.45 2751.06 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
38. HSP90AB1 ENSG00000096384 1054.69 2692.95 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
39. H2AFZ ENSG00000164032 1047.10 2673.57 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
40. MDK ENSG00000110492 1026.86 2621.89 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
41. RPS29 ENSG00000213741 1024.33 2615.43 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
42. EIF4G2 ENSG00000110321 933.28 2382.95 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
43. HNRNPD ENSG00000138668 915.58 2337.76 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
44. RPL7A ENSG00000148303, ENSG00000280858 905.46 2311.92 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
45. RPL10 ENSG00000147403 842.23 2150.47 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
46. RPS13 ENSG00000110700 842.23 2150.47 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
47. ZFP36L1 ENSG00000185650 827.06 2111.74 ZFP36 ring finger protein like 1 [Source:HGNC Symbol;Acc:HGNC:1107]
48. RPL22 ENSG00000116251 824.53 2105.28 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
49. HMGN1 ENSG00000205581 811.88 2072.98 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
50. RPL35 ENSG00000136942 801.76 2047.14 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
51. NUCKS1 ENSG00000069275 789.12 2014.87 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
52. RPLP0 ENSG00000089157 779.00 1989.03 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
53. COX7A2 ENSG00000112695 773.94 1976.11 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
54. RPL9 ENSG00000163682 768.88 1963.19 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
55. STMN1 ENSG00000117632 761.30 1943.83 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
56. RPS7 ENSG00000171863 743.59 1898.61 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
57. RPS2 ENSG00000140988 708.18 1808.20 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
58. MORF4L1 ENSG00000185787 698.07 1782.39 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
59. RPS11 ENSG00000142534 695.54 1775.93 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
60. SPINK1 ENSG00000164266 690.48 1763.01 serine peptidase inhibitor, Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]
61. RPL13 ENSG00000167526 652.54 1666.14 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
62. RPL26 ENSG00000161970 650.01 1659.68 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
63. RPS16 ENSG00000105193 650.01 1659.68 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
64. RPL32 ENSG00000144713 642.42 1640.30 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
65. TMSB4X ENSG00000205542 632.31 1614.48 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
66. RPS8 ENSG00000142937 624.72 1595.10 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
67. SUMO2 ENSG00000188612 622.19 1588.64 small ubiquitin-like modifier 2 [Source:HGNC Symbol;Acc:HGNC:11125]
68. RPL18A ENSG00000105640 619.66 1582.18 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
69. PCBP1 ENSG00000169564 604.48 1543.42 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
70. RPS5 ENSG00000083845 599.43 1530.53 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
71. TUBA1A ENSG00000167552 599.43 1530.53 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
72. TMEM258 ENSG00000134825 596.90 1524.07 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
73. TOMM6 ENSG00000214736 584.25 1491.77 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
74. RPL13AP20 ENSG00000234498 576.66 1472.39 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
75. UBB ENSG00000170315 561.49 1433.66 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
76. HNRNPK ENSG00000165119 551.37 1407.82 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
77. TCEA1 ENSG00000187735 546.31 1394.90 transcription elongation factor A1 [Source:HGNC Symbol;Acc:HGNC:11612]
78. SRP14 ENSG00000140319 538.72 1375.52 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
79. CFL1 ENSG00000172757 531.14 1356.16 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
80. RPL39 ENSG00000198918 513.43 1310.94 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
81. HNRNPA3 ENSG00000170144 510.90 1304.48 heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:HGNC:24941]
82. HSP90AA1 ENSG00000080824 500.79 1278.67 heat shock protein 90 alpha family class A member 1 [Source:HGNC Symbol;Acc:HGNC:5253]
83. MYL6 ENSG00000092841 498.26 1272.21 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
84. PFN1 ENSG00000108518 493.20 1259.29 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
85. RPL35A ENSG00000182899 493.20 1259.29 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
86. RPL6 ENSG00000089009 490.67 1252.83 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
87. TMA7 ENSG00000232112 483.08 1233.45 translation machinery associated 7 homolog [Source:HGNC Symbol;Acc:HGNC:26932]
88. PGAM1 ENSG00000171314 480.55 1226.99 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
89. SERF2 ENSG00000140264 478.02 1220.53 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
90. RPS25 ENSG00000118181, ENSG00000280831 475.49 1214.07 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
91. CBX3 ENSG00000122565 472.96 1207.61 chromobox 3 [Source:HGNC Symbol;Acc:HGNC:1553]
92. RPS21 ENSG00000171858 470.44 1201.18 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
93. PFN2 ENSG00000070087 465.38 1188.26 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
94. PNISR ENSG00000132424 465.38 1188.26 PNN interacting serine and arginine rich protein [Source:HGNC Symbol;Acc:HGNC:21222]
95. RPS14 ENSG00000164587 455.26 1162.42 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
96. ENAH ENSG00000154380 440.08 1123.66 ENAH, actin regulator [Source:HGNC Symbol;Acc:HGNC:18271]
97. RPL3 ENSG00000100316 437.56 1117.23 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
98. YBX1 ENSG00000065978 437.56 1117.23 Y-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8014]
99. HSPA8 ENSG00000109971 435.03 1110.77 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
100. SRSF2 ENSG00000161547 424.91 1084.93 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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