Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s90.

Sample reads: 391,650. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 13863.97 35401.26 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. EEF1A1 ENSG00000156508 6262.22 15990.40 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPS27 ENSG00000177954 4841.63 12362.97 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
4. HIST1H4C ENSG00000197061 3155.01 8056.23 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
5. SPINK1 ENSG00000164266 2898.33 7400.80 serine peptidase inhibitor, Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]
6. RPS12 ENSG00000112306 2894.17 7390.18 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
7. MTRNR2L8 ENSG00000255823 2881.70 7358.34 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
8. RPL37 ENSG00000145592 2380.81 6079.33 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
9. RPL31 ENSG00000071082 2337.16 5967.87 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
10. RPS23 ENSG00000186468 2331.97 5954.62 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
11. RPL10A ENSG00000198755 2269.61 5795.38 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
12. RPL5 ENSG00000122406 2250.91 5747.64 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
13. RPL34 ENSG00000109475 2206.22 5633.52 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
14. PPIA ENSG00000196262 1892.38 4832.14 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
15. ACTB ENSG00000075624 1870.56 4776.42 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
16. MALAT1 ENSG00000251562 1830.03 4672.93 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
17. MTRNR2L1 ENSG00000256618 1800.93 4598.62 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
18. RPL15 ENSG00000174748 1779.11 4542.91 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
19. RPL23 ENSG00000125691 1764.56 4505.75 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
20. SFRP1 ENSG00000104332 1758.33 4489.85 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
21. TPT1 ENSG00000133112 1631.54 4166.09 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
22. HMGA2 ENSG00000149948 1602.45 4091.81 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
23. RPS29 ENSG00000213741 1577.51 4028.13 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
24. RPS15A ENSG00000134419 1566.07 3998.92 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
25. TUBA1B ENSG00000123416 1469.43 3752.15 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
26. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1445.53 3691.12 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
27. RPS20 ENSG00000008988 1435.14 3664.59 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
28. RPS3A ENSG00000145425 1413.31 3608.85 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
29. PTMA ENSG00000187514 1402.92 3582.32 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
30. RPL11 ENSG00000142676 1379.02 3521.29 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
31. RPS27A ENSG00000143947 1348.88 3444.33 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
32. RPL30 ENSG00000156482 1337.45 3415.14 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
33. GNAS ENSG00000087460 1224.18 3125.91 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
34. HMGB1 ENSG00000189403 1161.83 2966.70 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
35. COL3A1 ENSG00000168542 1123.38 2868.52 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
36. NPM1 ENSG00000181163 1102.59 2815.43 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
37. RPL9 ENSG00000163682 1035.04 2642.95 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
38. ACTG1 ENSG00000184009 1024.65 2616.41 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
39. EIF4G2 ENSG00000110321 1011.14 2581.92 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
40. RPS6 ENSG00000137154 1011.14 2581.92 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
41. RPS13 ENSG00000110700 1004.91 2566.01 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
42. HNRNPC ENSG00000092199 994.51 2539.45 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
43. H2AFZ ENSG00000164032 982.04 2507.61 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
44. RPL10 ENSG00000147403 930.08 2374.93 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
45. RPL32 ENSG00000144713 920.73 2351.06 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
46. RPS7 ENSG00000171863 885.40 2260.84 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
47. TMSB4X ENSG00000205542 859.42 2194.50 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
48. HMGN1 ENSG00000205581 837.60 2138.79 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
49. HNRNPD ENSG00000138668 815.77 2083.05 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
50. CD24 ENSG00000272398 810.58 2069.79 CD24 molecule [Source:HGNC Symbol;Acc:HGNC:1645]
51. RPL22 ENSG00000116251 770.05 1966.30 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
52. MTRNR2L2 ENSG00000271043 725.36 1852.19 MT-RNR2 like 2 [Source:HGNC Symbol;Acc:HGNC:37156]
53. MORF4L1 ENSG00000185787 721.20 1841.56 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
54. RPL26 ENSG00000161970 713.93 1823.00 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
55. HSP90AA1 ENSG00000080824 702.50 1793.81 heat shock protein 90 alpha family class A member 1 [Source:HGNC Symbol;Acc:HGNC:5253]
56. ZFP36L1 ENSG00000185650 687.95 1756.66 ZFP36 ring finger protein like 1 [Source:HGNC Symbol;Acc:HGNC:1107]
57. NUCKS1 ENSG00000069275 685.87 1751.35 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
58. RPL7A ENSG00000148303, ENSG00000280858 644.30 1645.20 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
59. SRP14 ENSG00000140319 638.07 1629.29 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
60. RPL13AP20 ENSG00000234498 632.87 1616.02 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
61. RPLP0 ENSG00000089157 630.79 1610.70 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
62. MYL6 ENSG00000092841 629.76 1608.07 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
63. RPL35A ENSG00000182899 601.70 1536.42 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
64. HNRNPK ENSG00000165119 600.66 1533.77 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
65. COX7A2 ENSG00000112695 593.38 1515.18 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
66. PCBP2 ENSG00000197111 589.23 1504.58 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
67. TMEM258 ENSG00000134825 579.87 1480.68 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
68. RPS16 ENSG00000105193 575.72 1470.08 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
69. RPS11 ENSG00000142534 571.56 1459.46 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
70. RPS25 ENSG00000118181, ENSG00000280831 568.44 1451.50 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
71. RPL35 ENSG00000136942 567.40 1448.84 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
72. UBB ENSG00000170315 567.40 1448.84 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
73. STMN1 ENSG00000117632 562.21 1435.59 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
74. RPS8 ENSG00000142937 561.17 1432.93 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
75. SOX4 ENSG00000124766 555.97 1419.65 SRY-box 4 [Source:HGNC Symbol;Acc:HGNC:11200]
76. PNISR ENSG00000132424 542.46 1385.16 PNN interacting serine and arginine rich protein [Source:HGNC Symbol;Acc:HGNC:21222]
77. NGFRAP1 NGFRAP1 525.84 1342.72
78. PRRC2C ENSG00000117523 524.80 1340.06 proline rich coiled-coil 2C [Source:HGNC Symbol;Acc:HGNC:24903]
79. ID2 ENSG00000115738 516.48 1318.82 inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]
80. TOMM6 ENSG00000214736 511.29 1305.56 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
81. RPL39 ENSG00000198918 508.17 1297.60 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
82. RPL6 ENSG00000089009 501.93 1281.66 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
83. PCBP1 ENSG00000169564 489.46 1249.82 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
84. RPS28 ENSG00000233927 487.38 1244.51 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
85. RPL3 ENSG00000100316 483.23 1233.91 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
86. SUMO2 ENSG00000188612 483.23 1233.91 small ubiquitin-like modifier 2 [Source:HGNC Symbol;Acc:HGNC:11125]
87. CBX3 ENSG00000122565 481.15 1228.60 chromobox 3 [Source:HGNC Symbol;Acc:HGNC:1553]
88. RPS24 ENSG00000138326 480.11 1225.95 ribosomal protein S24 [Source:HGNC Symbol;Acc:HGNC:10411]
89. SET ENSG00000119335 474.91 1212.67 SET nuclear proto-oncogene [Source:HGNC Symbol;Acc:HGNC:10760]
90. HSP90B1 ENSG00000166598 473.88 1210.04 heat shock protein 90 beta family member 1 [Source:HGNC Symbol;Acc:HGNC:12028]
91. H3F3B ENSG00000132475 472.84 1207.38 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
92. HSPA8 ENSG00000109971 466.60 1191.45 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
93. RPL7 ENSG00000147604 465.56 1188.79 ribosomal protein L7 [Source:HGNC Symbol;Acc:HGNC:10363]
94. DLK1 ENSG00000185559 457.25 1167.57 delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
95. RPS21 ENSG00000171858 456.21 1164.92 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
96. GAPDH ENSG00000111640 452.05 1154.30 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
97. RPS14 ENSG00000164587 452.05 1154.30 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
98. RPS5 ENSG00000083845 449.97 1148.99 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
99. PBX1 ENSG00000185630 440.62 1125.11 PBX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8632]
100. ENAH ENSG00000154380 436.46 1114.49 ENAH, actin regulator [Source:HGNC Symbol;Acc:HGNC:18271]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA