Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s86.

Sample reads: 391,644. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 14430.07 36845.24 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. EEF1A1 ENSG00000156508 6540.26 16699.67 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. SPINK1 ENSG00000164266 5255.19 13418.42 serine peptidase inhibitor, Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]
4. RPS27 ENSG00000177954 5156.84 13167.30 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
5. HIST1H4C ENSG00000197061 4691.57 11979.29 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
6. RPS12 ENSG00000112306 4357.70 11126.80 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
7. DLK1 ENSG00000185559 3415.58 8721.22 delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
8. RPL10A ENSG00000198755 2823.04 7208.25 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
9. RPL15 ENSG00000174748 2605.69 6653.28 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
10. MTRNR2L8 ENSG00000255823 2522.23 6440.17 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
11. RPS6 ENSG00000137154 2419.75 6178.51 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
12. RPL37 ENSG00000145592 2397.44 6121.54 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
13. PPIA ENSG00000196262 2387.52 6096.21 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
14. RPL5 ENSG00000122406 2315.62 5912.62 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
15. RPL34 ENSG00000109475 2168.52 5537.02 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
16. RPS15A ENSG00000134419 2130.50 5439.94 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
17. RPS3A ENSG00000145425 2099.93 5361.89 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
18. MTRNR2L2 ENSG00000271043 1981.75 5060.13 MT-RNR2 like 2 [Source:HGNC Symbol;Acc:HGNC:37156]
19. RPL31 ENSG00000071082 1929.68 4927.18 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
20. TPT1 ENSG00000133112 1923.07 4910.30 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
21. RPS29 ENSG00000213741 1862.74 4756.26 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
22. RPS20 ENSG00000008988 1832.99 4680.29 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
23. RPL23 ENSG00000125691 1771.84 4524.15 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
24. RPL7A ENSG00000148303, ENSG00000280858 1756.14 4484.07 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
25. RPS2 ENSG00000140988 1726.39 4408.10 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
26. PTMA ENSG00000187514 1694.98 4327.90 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
27. RPL18A ENSG00000105640 1647.88 4207.64 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
28. RPS23 ENSG00000186468 1601.60 4089.47 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
29. RPL9 ENSG00000163682 1581.76 4038.81 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
30. RPL13AP20 ENSG00000234498 1548.71 3954.42 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
31. TUBA1B ENSG00000123416 1548.71 3954.42 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
32. RPLP0 ENSG00000089157 1497.47 3823.59 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
33. SFRP1 ENSG00000104332 1494.16 3815.14 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
34. RPS16 ENSG00000105193 1480.11 3779.26 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
35. GNAS ENSG00000087460 1449.54 3701.20 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
36. RPS13 ENSG00000110700 1424.74 3637.88 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
37. RPL11 ENSG00000142676 1420.61 3627.34 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
38. RPS27A ENSG00000143947 1418.96 3623.12 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
39. MDK ENSG00000110492 1409.87 3599.91 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
40. RPL30 ENSG00000156482 1407.39 3593.58 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
41. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1368.55 3494.41 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
42. ACTG1 ENSG00000184009 1337.97 3416.33 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
43. HNRNPC ENSG00000092199 1333.01 3403.66 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
44. ACTB ENSG00000075624 1310.70 3346.70 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
45. MTRNR2L1 ENSG00000256618 1301.61 3323.49 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
46. RPS7 ENSG00000171863 1290.04 3293.94 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
47. RPL10 ENSG00000147403 1252.02 3196.86 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
48. RPS5 ENSG00000083845 1219.79 3114.57 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
49. RPL35 ENSG00000136942 1162.77 2968.98 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
50. HBE1 ENSG00000213931 1147.07 2928.89 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
51. COL3A1 ENSG00000168542 1130.54 2886.68 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
52. RPS11 ENSG00000142534 1115.66 2848.69 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
53. UBB ENSG00000170315 1112.36 2840.26 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
54. RPL13 ENSG00000167526 1097.48 2802.27 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
55. H2AFZ ENSG00000164032 1047.90 2675.67 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
56. RPS8 ENSG00000142937 1036.33 2646.13 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
57. RPL26 ENSG00000161970 1019.80 2603.92 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
58. NPM1 ENSG00000181163 1009.88 2578.59 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
59. HSP90AB1 ENSG00000096384 995.83 2542.72 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
60. HMGB1 ENSG00000189403 854.52 2181.90 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
61. RPS25 ENSG00000118181, ENSG00000280831 846.25 2160.79 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
62. HMGN1 ENSG00000205581 827.24 2112.25 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
63. SRP14 ENSG00000140319 813.19 2076.37 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
64. RPS28 ENSG00000233927 784.27 2002.53 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
65. RPL32 ENSG00000144713 780.14 1991.98 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
66. MALAT1 ENSG00000251562 756.17 1930.78 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
67. RPL35A ENSG00000182899 749.56 1913.90 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
68. RPL27A ENSG00000166441 744.60 1901.24 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
69. COX7A2 ENSG00000112695 736.34 1880.14 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
70. SPINT2 ENSG00000167642 730.55 1865.36 serine peptidase inhibitor, Kunitz type 2 [Source:HGNC Symbol;Acc:HGNC:11247]
71. EIF4G2 ENSG00000110321 709.89 1812.61 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
72. AFP ENSG00000081051 702.45 1793.61 alpha fetoprotein [Source:HGNC Symbol;Acc:HGNC:317]
73. MORF4L1 ENSG00000185787 683.45 1745.10 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
74. RPL39 ENSG00000198918 661.96 1690.23 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
75. TMEM258 ENSG00000134825 660.31 1686.01 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
76. SERF2 ENSG00000140264 658.65 1681.77 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
77. TOMM6 ENSG00000214736 652.87 1667.02 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
78. RPS21 ENSG00000171858 650.39 1660.68 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
79. TMSB4X ENSG00000205542 642.13 1639.59 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
80. NGFRAP1 NGFRAP1 623.94 1593.15
81. RPS14 ENSG00000164587 604.94 1544.63 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
82. HMGA2 ENSG00000149948 599.98 1531.97 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
83. STMN1 ENSG00000117632 598.33 1527.75 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
84. RPL22 ENSG00000116251 589.24 1504.54 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
85. RPL3 ENSG00000100316 585.93 1496.09 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
86. PFN1 ENSG00000108518 580.97 1483.43 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
87. RPLP1 ENSG00000137818 573.53 1464.43 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
88. APOA2 ENSG00000158874 569.40 1453.89 apolipoprotein A2 [Source:HGNC Symbol;Acc:HGNC:601]
89. ID2 ENSG00000115738 567.75 1449.67 inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]
90. GAPDH ENSG00000111640 561.14 1432.80 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
91. RPL4 ENSG00000174444 523.12 1335.72 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
92. FTH1 ENSG00000167996 521.47 1331.50 ferritin heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:3976]
93. RPS19 ENSG00000105372 519.82 1327.29 ribosomal protein S19 [Source:HGNC Symbol;Acc:HGNC:10402]
94. FAU ENSG00000149806 516.51 1318.84 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
95. RPL37A ENSG00000197756 515.68 1316.72 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
96. HNRNPK ENSG00000165119 514.86 1314.63 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
97. EEF1B2 ENSG00000114942, ENSG00000283391 500.81 1278.75 eukaryotic translation elongation factor 1 beta 2 [Source:HGNC Symbol;Acc:HGNC:3208]
98. CKS1B ENSG00000173207 498.33 1272.42 CDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]
99. PCBP1 ENSG00000169564 496.68 1268.21 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
100. SUMO2 ENSG00000188612 485.11 1238.66 small ubiquitin-like modifier 2 [Source:HGNC Symbol;Acc:HGNC:11125]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA