Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Human data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Human_35d_slice2, section s83.

Sample reads: 391,641. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 10087.09 25756.16 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. HIST1H4C ENSG00000197061 8207.23 20956.16 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
3. EEF1A1 ENSG00000156508 5398.34 13784.00 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
4. SFRP1 ENSG00000104332 5185.34 13240.14 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
5. RPS27 ENSG00000177954 3528.75 9010.23 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
6. RPS12 ENSG00000112306 3193.84 8155.08 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
7. COL3A1 ENSG00000168542 2993.66 7643.95 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
8. RPL37 ENSG00000145592 2649.77 6765.87 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
9. RPL31 ENSG00000071082 2548.40 6507.03 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
10. RPS23 ENSG00000186468 2436.76 6221.97 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
11. RPL10A ENSG00000198755 2157.03 5507.71 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
12. RPL23 ENSG00000125691 2083.89 5320.96 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
13. ACTB ENSG00000075624 2010.75 5134.21 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
14. MALAT1 ENSG00000251562 2005.61 5121.08 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
15. RPL15 ENSG00000174748 1985.08 5068.66 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
16. PTMA ENSG00000187514 1961.98 5009.68 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
17. RPS15A ENSG00000134419 1856.76 4741.01 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
18. RPL5 ENSG00000122406 1820.83 4649.27 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
19. RPL34 ENSG00000109475 1818.27 4642.73 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
20. RPS29 ENSG00000213741 1783.62 4554.26 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
21. MTRNR2L1 ENSG00000256618 1748.98 4465.81 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
22. TUBA1B ENSG00000123416 1657.87 4233.17 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
23. TPT1 ENSG00000133112 1636.06 4177.48 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
24. GNAS ENSG00000087460 1620.66 4138.16 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
25. RPS3A ENSG00000145425 1607.83 4105.40 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
26. ACTG1 ENSG00000184009 1601.41 4089.01 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
27. RPS20 ENSG00000008988 1548.80 3954.67 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
28. HMGB1 ENSG00000189403 1426.90 3643.42 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
29. SPINK1 ENSG00000164266 1406.37 3590.99 serine peptidase inhibitor, Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]
30. RPL9 ENSG00000163682 1374.29 3509.08 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
31. PPIA ENSG00000196262 1305.00 3332.16 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
32. RPL30 ENSG00000156482 1284.46 3279.71 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
33. MTRNR2L8 ENSG00000255823 1278.05 3263.35 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
34. RPS27A ENSG00000143947 1270.35 3243.68 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
35. RPS6 ENSG00000137154 1265.22 3230.59 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
36. RPS7 ENSG00000171863 1230.57 3142.11 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
37. RPL11 ENSG00000142676 1210.04 3089.69 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
38. RPL7A ENSG00000148303, ENSG00000280858 1071.46 2735.84 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
39. HMGA2 ENSG00000149948 1068.89 2729.28 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
40. HNRNPC ENSG00000092199 1043.23 2663.76 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
41. RPL32 ENSG00000144713 1030.39 2630.98 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
42. TMSB4X ENSG00000205542 1020.13 2604.78 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
43. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 982.92 2509.77 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
44. RPS16 ENSG00000105193 954.69 2437.68 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
45. MDK ENSG00000110492 945.70 2414.73 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
46. ID2 ENSG00000115738 907.21 2316.45 inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]
47. RPL18A ENSG00000105640 896.94 2290.23 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
48. RPS13 ENSG00000110700 861.01 2198.48 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
49. EIF4G2 ENSG00000110321 859.73 2195.22 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
50. RPS8 ENSG00000142937 850.75 2172.29 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
51. NUCKS1 ENSG00000069275 846.90 2162.46 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
52. HNRNPK ENSG00000165119 812.25 2073.98 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
53. RPL22 ENSG00000116251 805.84 2057.61 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
54. RPL35 ENSG00000136942 803.27 2051.05 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
55. NPM1 ENSG00000181163 794.29 2028.12 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
56. RPLP0 ENSG00000089157 794.29 2028.12 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
57. RPL26 ENSG00000161970 771.19 1969.14 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
58. RPS11 ENSG00000142534 760.93 1942.94 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
59. COX7A2 ENSG00000112695 745.53 1903.62 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
60. RPL10 ENSG00000147403 739.11 1887.23 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
61. RPS2 ENSG00000140988 737.83 1883.96 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
62. H2AFZ ENSG00000164032 721.15 1841.37 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
63. RPS5 ENSG00000083845 718.58 1834.81 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
64. UBB ENSG00000170315 712.17 1818.44 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
65. MORF4L1 ENSG00000185787 685.22 1749.63 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
66. MTRNR2L2 ENSG00000271043 682.65 1743.06 MT-RNR2 like 2 [Source:HGNC Symbol;Acc:HGNC:37156]
67. RPL35A ENSG00000182899 656.99 1677.54 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
68. DLK1 ENSG00000185559 631.33 1612.02 delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
69. RPL13 ENSG00000167526 630.04 1608.73 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
70. RPL13AP20 ENSG00000234498 622.34 1589.07 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
71. HSP90AB1 ENSG00000096384 613.36 1566.14 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
72. HNRNPD ENSG00000138668 610.79 1559.58 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
73. HSP90AA1 ENSG00000080824 610.79 1559.58 heat shock protein 90 alpha family class A member 1 [Source:HGNC Symbol;Acc:HGNC:5253]
74. RPL39 ENSG00000198918 596.68 1523.55 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
75. HMGN1 ENSG00000205581 590.26 1507.16 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
76. SOX4 ENSG00000124766 581.28 1484.23 SRY-box 4 [Source:HGNC Symbol;Acc:HGNC:11200]
77. NGFRAP1 NGFRAP1 580.00 1480.96
78. CBX3 ENSG00000122565 578.71 1477.67 chromobox 3 [Source:HGNC Symbol;Acc:HGNC:1553]
79. ZFP36L1 ENSG00000185650 568.45 1451.47 ZFP36 ring finger protein like 1 [Source:HGNC Symbol;Acc:HGNC:1107]
80. SRP14 ENSG00000140319 559.47 1428.54 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
81. RPS25 ENSG00000118181, ENSG00000280831 558.18 1425.24 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
82. RPL27A ENSG00000166441 556.90 1421.98 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
83. MYL6 ENSG00000092841 546.64 1395.78 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
84. H3F3B ENSG00000132475 541.50 1382.65 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
85. RPS28 ENSG00000233927 536.37 1369.56 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
86. PCBP1 ENSG00000169564 529.95 1353.16 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
87. PCBP2 ENSG00000197111 518.41 1323.70 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
88. ITM2B ENSG00000136156 506.86 1294.21 integral membrane protein 2B [Source:HGNC Symbol;Acc:HGNC:6174]
89. FAU ENSG00000149806 501.72 1281.08 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
90. RPS24 ENSG00000138326 500.44 1277.81 ribosomal protein S24 [Source:HGNC Symbol;Acc:HGNC:10411]
91. RPS14 ENSG00000164587 492.74 1258.15 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
92. VIM ENSG00000026025 479.91 1225.39 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
93. RPL7 ENSG00000147604 478.63 1222.12 ribosomal protein L7 [Source:HGNC Symbol;Acc:HGNC:10363]
94. TOMM6 ENSG00000214736 467.08 1192.63 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
95. ITGB1 ENSG00000150093 456.81 1166.41 integrin subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:6153]
96. SUMO2 ENSG00000188612 455.53 1163.14 small ubiquitin-like modifier 2 [Source:HGNC Symbol;Acc:HGNC:11125]
97. TPM1 ENSG00000140416 454.25 1159.87 tropomyosin 1 [Source:HGNC Symbol;Acc:HGNC:12010]
98. RPS21 ENSG00000171858 450.40 1150.04 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
99. PFN1 ENSG00000108518 440.13 1123.82 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
100. EIF1AX ENSG00000173674 437.56 1117.26 eukaryotic translation initiation factor 1A X-linked [Source:HGNC Symbol;Acc:HGNC:3250]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA