Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s81.

Sample reads: 391,652. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. HIST1H4C ENSG00000197061 11092.89 28323.33 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
2. RPL41 ENSG00000229117 10816.07 27616.53 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
3. EEF1A1 ENSG00000156508 5985.58 15282.90 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
4. SFRP1 ENSG00000104332 5392.82 13769.42 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
5. RPS27 ENSG00000177954 5133.39 13107.02 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
6. RPS12 ENSG00000112306 3349.32 8551.77 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
7. RPL37 ENSG00000145592 3010.18 7685.85 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
8. RPL31 ENSG00000071082 2910.18 7430.52 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
9. RPS29 ENSG00000213741 2760.90 7049.37 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
10. RPL10A ENSG00000198755 2759.45 7045.67 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
11. RPL34 ENSG00000109475 2733.37 6979.08 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
12. COL3A1 ENSG00000168542 2668.15 6812.55 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
13. RPS15A ENSG00000134419 2533.36 6468.39 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
14. RPL5 ENSG00000122406 2326.11 5939.23 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
15. SPINK1 ENSG00000164266 2311.62 5902.23 serine peptidase inhibitor, Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]
16. RPS23 ENSG00000186468 2262.35 5776.43 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
17. RPS3A ENSG00000145425 2240.61 5720.92 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
18. TPT1 ENSG00000133112 2236.26 5709.81 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
19. PTMA ENSG00000187514 2094.23 5347.17 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
20. RPL23 ENSG00000125691 2037.71 5202.86 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
21. RPL15 ENSG00000174748 2008.72 5128.84 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
22. ACTG1 ENSG00000184009 2001.47 5110.33 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
23. MTRNR2L1 ENSG00000256618 1998.57 5102.92 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
24. MALAT1 ENSG00000251562 1976.84 5047.44 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
25. ACTB ENSG00000075624 1959.44 5003.01 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
26. RPS6 ENSG00000137154 1814.51 4632.96 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
27. RPS20 ENSG00000008988 1652.19 4218.51 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
28. TUBA1B ENSG00000123416 1588.42 4055.69 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
29. RPL9 ENSG00000163682 1556.54 3974.29 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
30. PPIA ENSG00000196262 1547.84 3952.08 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
31. RPL30 ENSG00000156482 1476.83 3770.77 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
32. MTRNR2L8 ENSG00000255823 1347.84 3441.42 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
33. RPS16 ENSG00000105193 1334.80 3408.13 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
34. TMSB4X ENSG00000205542 1255.09 3204.60 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
35. RPL7A ENSG00000148303, ENSG00000280858 1200.01 3063.97 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
36. HMGB1 ENSG00000189403 1175.38 3001.08 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
37. RPS27A ENSG00000143947 1172.48 2993.68 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
38. GNAS ENSG00000087460 1150.74 2938.17 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
39. MDK ENSG00000110492 1149.29 2934.47 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
40. RPS7 ENSG00000171863 1149.29 2934.47 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
41. RPL11 ENSG00000142676 1143.49 2919.66 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
42. RPL35 ENSG00000136942 1114.51 2845.66 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
43. MTRNR2L2 ENSG00000271043 1108.71 2830.85 MT-RNR2 like 2 [Source:HGNC Symbol;Acc:HGNC:37156]
44. RPS5 ENSG00000083845 989.87 2527.42 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
45. RPS2 ENSG00000140988 971.03 2479.32 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
46. NPM1 ENSG00000181163 956.53 2442.30 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
47. HNRNPC ENSG00000092199 953.63 2434.89 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
48. EIF4G2 ENSG00000110321 934.79 2386.79 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
49. HMGA2 ENSG00000149948 923.20 2357.19 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
50. RPL32 ENSG00000144713 910.16 2323.90 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
51. RPS13 ENSG00000110700 895.66 2286.88 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
52. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 888.42 2268.39 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
53. RPL18A ENSG00000105640 881.17 2249.88 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
54. RPLP0 ENSG00000089157 881.17 2249.88 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
55. RPL10 ENSG00000147403 871.02 2223.96 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
56. RPS8 ENSG00000142937 859.43 2194.37 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
57. ID2 ENSG00000115738 852.18 2175.86 inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]
58. MORF4L1 ENSG00000185787 836.24 2135.16 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
59. NGFRAP1 NGFRAP1 831.89 2124.05
60. RPL22 ENSG00000116251 824.65 2105.57 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
61. RPL13AP20 ENSG00000234498 818.85 2090.76 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
62. MYL6 ENSG00000092841 814.50 2079.65 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
63. FAU ENSG00000149806 813.05 2075.95 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
64. RPS11 ENSG00000142534 801.46 2046.36 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
65. RPL26 ENSG00000161970 778.27 1987.15 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
66. RPL13 ENSG00000167526 776.82 1983.44 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
67. DLK1 ENSG00000185559 755.08 1927.94 delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
68. NUCKS1 ENSG00000069275 734.79 1876.13 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
69. UBB ENSG00000170315 720.30 1839.13 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
70. H2AFZ ENSG00000164032 714.50 1824.32 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
71. RPS28 ENSG00000233927 711.60 1816.92 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
72. RPS25 ENSG00000118181, ENSG00000280831 710.15 1813.22 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
73. COX7A2 ENSG00000112695 705.81 1802.14 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
74. RPS14 ENSG00000164587 702.91 1794.73 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
75. RPL35A ENSG00000182899 685.52 1750.33 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
76. RPL27A ENSG00000166441 679.72 1735.52 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
77. HSP90AB1 ENSG00000096384 644.94 1646.72 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
78. HMGN1 ENSG00000205581 637.69 1628.21 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
79. SRP14 ENSG00000140319 614.50 1568.99 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
80. TMEM258 ENSG00000134825 576.82 1472.79 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
81. H3F3B ENSG00000132475 568.12 1450.57 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
82. TOMM6 ENSG00000214736 555.08 1417.28 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
83. HNRNPK ENSG00000165119 550.73 1406.17 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
84. EEF1B2 ENSG00000114942, ENSG00000283391 549.28 1402.47 eukaryotic translation elongation factor 1 beta 2 [Source:HGNC Symbol;Acc:HGNC:3208]
85. ZFP36L1 ENSG00000185650 547.83 1398.77 ZFP36 ring finger protein like 1 [Source:HGNC Symbol;Acc:HGNC:1107]
86. RPS24 ENSG00000138326 536.24 1369.17 ribosomal protein S24 [Source:HGNC Symbol;Acc:HGNC:10411]
87. RPL39 ENSG00000198918 533.34 1361.77 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
88. SERF2 ENSG00000140264 533.34 1361.77 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
89. RPS21 ENSG00000171858 523.19 1335.85 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
90. PFN1 ENSG00000108518 518.85 1324.77 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
91. STMN1 ENSG00000117632 481.17 1228.57 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
92. CBX3 ENSG00000122565 475.37 1213.76 chromobox 3 [Source:HGNC Symbol;Acc:HGNC:1553]
93. SOX4 ENSG00000124766 468.12 1195.24 SRY-box 4 [Source:HGNC Symbol;Acc:HGNC:11200]
94. HNRNPD ENSG00000138668 466.67 1191.54 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
95. RPS9 ENSG00000170889, ENSG00000274646, ENSG00000274950, ENSG00000278270 465.22 1187.84 ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:10442]
96. SUMO2 ENSG00000188612 459.43 1173.06 small ubiquitin-like modifier 2 [Source:HGNC Symbol;Acc:HGNC:11125]
97. PCBP1 ENSG00000169564 453.63 1158.25 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
98. RPL37A ENSG00000197756 430.44 1099.04 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
99. RPL7 ENSG00000147604 423.19 1080.53 ribosomal protein L7 [Source:HGNC Symbol;Acc:HGNC:10363]
100. TMPO ENSG00000120802 421.74 1076.82 thymopoietin [Source:HGNC Symbol;Acc:HGNC:11875]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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