Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s76.

Sample reads: 391,635. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 12741.69 32534.60 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. HIST1H4C ENSG00000197061 7800.03 19916.58 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
3. SFRP1 ENSG00000104332 5692.17 14534.37 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
4. EEF1A1 ENSG00000156508 3707.19 9465.93 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
5. COL3A1 ENSG00000168542 3508.69 8959.08 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
6. RPS27 ENSG00000177954 3434.96 8770.82 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
7. RPL37 ENSG00000145592 2835.69 7240.64 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
8. RPS12 ENSG00000112306 2729.82 6970.31 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
9. MALAT1 ENSG00000251562 2599.38 6637.25 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
10. RPS23 ENSG00000186468 2421.68 6183.51 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
11. RPL31 ENSG00000071082 2340.39 5975.95 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
12. ACTB ENSG00000075624 2323.37 5932.49 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
13. RPS29 ENSG00000213741 2249.64 5744.22 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
14. RPL34 ENSG00000109475 2088.96 5333.94 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
15. TPT1 ENSG00000133112 1945.28 4967.07 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
16. RPS15A ENSG00000134419 1860.21 4749.86 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
17. RPL15 ENSG00000174748 1829.96 4672.61 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
18. RPL5 ENSG00000122406 1625.79 4151.29 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
19. RPL23 ENSG00000125691 1544.50 3943.72 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
20. RPL10A ENSG00000198755 1510.48 3856.86 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
21. MTRNR2L8 ENSG00000255823 1467.00 3745.83 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
22. TUBA1B ENSG00000123416 1406.50 3591.35 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
23. ACTG1 ENSG00000184009 1383.82 3533.44 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
24. RPL30 ENSG00000156482 1334.66 3407.92 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
25. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1328.99 3393.44 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
26. PTMA ENSG00000187514 1311.98 3350.01 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
27. PPIA ENSG00000196262 1304.42 3330.70 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
28. HMGB1 ENSG00000189403 1272.28 3248.64 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
29. RPS20 ENSG00000008988 1230.69 3142.44 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
30. NPM1 ENSG00000181163 1209.89 3089.33 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
31. RPS27A ENSG00000143947 1179.65 3012.12 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
32. HMGA2 ENSG00000149948 1128.60 2881.76 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
33. RPL9 ENSG00000163682 1105.92 2823.85 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
34. EIF4G2 ENSG00000110321 1094.58 2794.90 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
35. RPS7 ENSG00000171863 1090.79 2785.22 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
36. MTRNR2L1 ENSG00000256618 1066.22 2722.48 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
37. GNAS ENSG00000087460 1054.88 2693.53 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
38. H2AFZ ENSG00000164032 1054.88 2693.53 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
39. NUCKS1 ENSG00000069275 1054.88 2693.53 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
40. HNRNPC ENSG00000092199 994.38 2539.05 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
41. MORF4L1 ENSG00000185787 971.70 2481.14 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
42. HBE1 ENSG00000213931 954.68 2437.68 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
43. ZFP36L1 ENSG00000185650 939.56 2399.07 ZFP36 ring finger protein like 1 [Source:HGNC Symbol;Acc:HGNC:1107]
44. RPL11 ENSG00000142676 916.87 2341.13 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
45. SOX4 ENSG00000124766 890.41 2273.57 SRY-box 4 [Source:HGNC Symbol;Acc:HGNC:11200]
46. ID2 ENSG00000115738 858.27 2191.50 inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]
47. RPS6 ENSG00000137154 846.93 2162.55 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
48. RPS3A ENSG00000145425 818.57 2090.13 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
49. TMSB4X ENSG00000205542 790.21 2017.72 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
50. HNRNPK ENSG00000165119 725.94 1853.61 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
51. RPL10 ENSG00000147403 716.48 1829.46 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
52. RPL32 ENSG00000144713 695.69 1776.37 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
53. MARCKS ENSG00000277443 682.46 1742.59 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
54. RPL26 ENSG00000161970 680.56 1737.74 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
55. RPS13 ENSG00000110700 659.77 1684.65 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
56. HDAC2 ENSG00000196591 655.99 1675.00 histone deacetylase 2 [Source:HGNC Symbol;Acc:HGNC:4853]
57. HSP90AA1 ENSG00000080824 654.10 1670.18 heat shock protein 90 alpha family class A member 1 [Source:HGNC Symbol;Acc:HGNC:5253]
58. RPL13AP20 ENSG00000234498 646.54 1650.87 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
59. COX7A2 ENSG00000112695 640.87 1636.40 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
60. RPS25 ENSG00000118181, ENSG00000280831 621.96 1588.11 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
61. RPL7A ENSG00000148303, ENSG00000280858 616.29 1573.63 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
62. SRP14 ENSG00000140319 606.84 1549.50 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
63. HNRNPD ENSG00000138668 604.95 1544.68 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
64. VIM ENSG00000026025 584.15 1491.57 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
65. RPS8 ENSG00000142937 582.26 1486.74 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
66. PCBP1 ENSG00000169564 576.59 1472.26 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
67. ENAH ENSG00000154380 570.92 1457.79 ENAH, actin regulator [Source:HGNC Symbol;Acc:HGNC:18271]
68. RPLP0 ENSG00000089157 570.92 1457.79 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
69. RPS28 ENSG00000233927 570.92 1457.79 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
70. TOMM6 ENSG00000214736 565.25 1443.31 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
71. RPL22 ENSG00000116251 559.58 1428.83 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
72. RPL35 ENSG00000136942 559.58 1428.83 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
73. SUMO2 ENSG00000188612 546.34 1395.02 small ubiquitin-like modifier 2 [Source:HGNC Symbol;Acc:HGNC:11125]
74. ZFHX4 ENSG00000091656 546.34 1395.02 zinc finger homeobox 4 [Source:HGNC Symbol;Acc:HGNC:30939]
75. RPS24 ENSG00000138326 544.45 1390.20 ribosomal protein S24 [Source:HGNC Symbol;Acc:HGNC:10411]
76. ATRX ENSG00000085224 540.67 1380.55 ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
77. RPL35A ENSG00000182899 533.11 1361.24 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
78. CBX3 ENSG00000122565 523.66 1337.11 chromobox 3 [Source:HGNC Symbol;Acc:HGNC:1553]
79. CCAR1 ENSG00000060339 517.99 1322.63 cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
80. PCBP2 ENSG00000197111 516.09 1317.78 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
81. SOX11 ENSG00000176887 514.20 1312.96 SRY-box 11 [Source:HGNC Symbol;Acc:HGNC:11191]
82. MTRNR2L2 ENSG00000271043 506.64 1293.65 MT-RNR2 like 2 [Source:HGNC Symbol;Acc:HGNC:37156]
83. HMGN1 ENSG00000205581 500.97 1279.18 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
84. RPL39 ENSG00000198918 500.97 1279.18 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
85. EPM2AIP1 ENSG00000178567 499.08 1274.35 EPM2A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:19735]
86. RPS11 ENSG00000142534 499.08 1274.35 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
87. TCEA1 ENSG00000187735 499.08 1274.35 transcription elongation factor A1 [Source:HGNC Symbol;Acc:HGNC:11612]
88. HBG2 ENSG00000196565 497.19 1269.52 hemoglobin subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:4832]
89. H3F3B ENSG00000132475 493.41 1259.87 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
90. HSP90B1 ENSG00000166598 491.52 1255.05 heat shock protein 90 beta family member 1 [Source:HGNC Symbol;Acc:HGNC:12028]
91. RPL18A ENSG00000105640 491.52 1255.05 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
92. RPS16 ENSG00000105193 491.52 1255.05 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
93. RPL37A ENSG00000197756 487.74 1245.39 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
94. NAP1L1 ENSG00000187109 482.07 1230.92 nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
95. EIF1AX ENSG00000173674 480.18 1226.09 eukaryotic translation initiation factor 1A X-linked [Source:HGNC Symbol;Acc:HGNC:3250]
96. PNISR ENSG00000132424 480.18 1226.09 PNN interacting serine and arginine rich protein [Source:HGNC Symbol;Acc:HGNC:21222]
97. HSPA8 ENSG00000109971 476.40 1216.44 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
98. ITGB1 ENSG00000150093 476.40 1216.44 integrin subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:6153]
99. RPS5 ENSG00000083845 470.72 1201.94 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
100. PRRC2C ENSG00000117523 466.94 1192.28 proline rich coiled-coil 2C [Source:HGNC Symbol;Acc:HGNC:24903]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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