Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s72.

Sample reads: 391,642. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 12386.00 31625.86 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. RPS27 ENSG00000177954 11070.58 28267.12 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
3. EEF1A1 ENSG00000156508 6870.25 17542.19 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
4. HIST1H4C ENSG00000197061 6377.70 16284.53 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
5. SFRP1 ENSG00000104332 6106.02 15590.84 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
6. RPS12 ENSG00000112306 4126.06 10535.30 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
7. RPS29 ENSG00000213741 3220.12 8222.11 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
8. RPL34 ENSG00000109475 3059.85 7812.88 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
9. COL3A1 ENSG00000168542 2875.15 7341.28 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
10. RPL31 ENSG00000071082 2734.42 6981.95 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
11. TPT1 ENSG00000133112 2684.58 6854.69 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
12. RPL37 ENSG00000145592 2672.85 6824.74 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
13. RPS15A ENSG00000134419 2632.78 6722.42 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
14. MTRNR2L8 ENSG00000255823 2433.42 6213.39 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
15. RPL23 ENSG00000125691 2156.85 5507.20 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
16. RPS20 ENSG00000008988 2118.73 5409.87 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
17. RPL10A ENSG00000198755 2051.30 5237.70 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
18. RPS3A ENSG00000145425 1993.64 5090.47 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
19. RPL15 ENSG00000174748 1964.32 5015.61 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
20. RPL5 ENSG00000122406 1958.46 5000.64 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
21. RPS6 ENSG00000137154 1937.94 4948.25 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
22. ACTB ENSG00000075624 1928.17 4923.30 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
23. ACTG1 ENSG00000184009 1752.26 4474.14 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
24. RPS23 ENSG00000186468 1677.01 4282.00 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
25. RPL9 ENSG00000163682 1628.14 4157.22 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
26. MALAT1 ENSG00000251562 1627.16 4154.72 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
27. PPIA ENSG00000196262 1594.91 4072.37 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
28. GNAS ENSG00000087460 1545.07 3945.11 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
29. RPL11 ENSG00000142676 1542.14 3937.63 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
30. PTMA ENSG00000187514 1520.64 3882.73 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
31. RPS27A ENSG00000143947 1432.69 3658.17 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
32. TUBA1B ENSG00000123416 1419.00 3623.21 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
33. TMSB4X ENSG00000205542 1359.39 3471.01 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
34. RPS13 ENSG00000110700 1276.32 3258.90 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
35. MTRNR2L1 ENSG00000256618 1253.85 3201.52 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
36. RPS16 ENSG00000105193 1235.28 3154.11 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
37. HMGB1 ENSG00000189403 1230.39 3141.62 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
38. RPL13AP20 ENSG00000234498 1223.55 3124.16 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
39. RPL10 ENSG00000147403 1172.73 2994.40 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
40. RPS7 ENSG00000171863 1171.75 2991.89 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
41. RPL35 ENSG00000136942 1149.28 2934.52 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
42. RPL18A ENSG00000105640 1145.37 2924.54 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
43. RPL30 ENSG00000156482 1115.07 2847.17 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
44. HNRNPC ENSG00000092199 1099.44 2807.26 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
45. NPM1 ENSG00000181163 1022.23 2610.12 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
46. RPL26 ENSG00000161970 1021.25 2607.61 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
47. RPL32 ENSG00000144713 982.16 2507.80 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
48. RPS8 ENSG00000142937 980.21 2502.82 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
49. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 946.00 2415.47 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
50. RPL7A ENSG00000148303, ENSG00000280858 941.12 2403.01 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
51. RPS11 ENSG00000142534 927.43 2368.06 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
52. RPS5 ENSG00000083845 858.05 2190.91 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
53. RPL22 ENSG00000116251 833.62 2128.53 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
54. MDK ENSG00000110492 817.00 2086.09 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
55. MORF4L1 ENSG00000185787 803.32 2051.16 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
56. H2AFZ ENSG00000164032 796.48 2033.70 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
57. EIF4G2 ENSG00000110321 795.50 2031.19 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
58. NGFRAP1 NGFRAP1 795.50 2031.19
59. RPS25 ENSG00000118181, ENSG00000280831 783.78 2001.27 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
60. MYL6 ENSG00000092841 756.41 1931.38 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
61. RPS2 ENSG00000140988 749.57 1913.92 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
62. RPL35A ENSG00000182899 731.00 1866.50 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
63. HMGN1 ENSG00000205581 717.32 1831.57 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
64. RPL27A ENSG00000166441 686.05 1751.73 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
65. RPL39 ENSG00000198918 685.07 1749.23 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
66. COX7A2 ENSG00000112695 684.09 1746.72 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
67. ID2 ENSG00000115738 653.80 1669.38 inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]
68. RPS24 ENSG00000138326 645.98 1649.42 ribosomal protein S24 [Source:HGNC Symbol;Acc:HGNC:10411]
69. RPLP0 ENSG00000089157 641.09 1636.93 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
70. RPL13 ENSG00000167526 639.14 1631.95 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
71. FAU ENSG00000149806 632.30 1614.49 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
72. MTRNR2L2 ENSG00000271043 629.37 1607.01 MT-RNR2 like 2 [Source:HGNC Symbol;Acc:HGNC:37156]
73. SRP14 ENSG00000140319 624.48 1594.52 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
74. RPS14 ENSG00000164587 602.98 1539.62 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
75. RPS28 ENSG00000233927 594.18 1517.15 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
76. UBB ENSG00000170315 594.18 1517.15 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
77. NUCKS1 ENSG00000069275 585.39 1494.71 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
78. RPL7 ENSG00000147604 585.39 1494.71 ribosomal protein L7 [Source:HGNC Symbol;Acc:HGNC:10363]
79. VIM ENSG00000026025 585.39 1494.71 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
80. HSP90AB1 ENSG00000096384 582.46 1487.23 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
81. RPS21 ENSG00000171858 577.57 1474.74 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
82. SERF2 ENSG00000140264 560.96 1432.33 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
83. HMGA2 ENSG00000149948 540.43 1379.91 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
84. PFN1 ENSG00000108518 522.84 1335.00 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
85. RPL14 ENSG00000188846 510.14 1302.57 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
86. TOMM6 ENSG00000214736 501.34 1280.10 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
87. HNRNPD ENSG00000138668 500.37 1277.62 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
88. RPL6 ENSG00000089009 492.55 1257.66 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
89. SUMO2 ENSG00000188612 490.59 1252.65 small ubiquitin-like modifier 2 [Source:HGNC Symbol;Acc:HGNC:11125]
90. HNRNPK ENSG00000165119 485.71 1240.19 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
91. HINT1 ENSG00000169567 480.82 1227.70 histidine triad nucleotide binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4912]
92. RPL37A ENSG00000197756 480.82 1227.70 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
93. TMEM258 ENSG00000134825 457.37 1167.83 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
94. H3F3B ENSG00000132475 452.48 1155.34 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
95. EEF1B2 ENSG00000114942, ENSG00000283391 440.75 1125.39 eukaryotic translation elongation factor 1 beta 2 [Source:HGNC Symbol;Acc:HGNC:3208]
96. COX7C ENSG00000127184 434.89 1110.43 cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
97. RPS9 ENSG00000170889, ENSG00000274646, ENSG00000274950, ENSG00000278270 432.93 1105.42 ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:10442]
98. RPLP1 ENSG00000137818 421.21 1075.50 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
99. STMN1 ENSG00000117632 417.30 1065.52 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
100. CBX3 ENSG00000122565 416.32 1063.01 chromobox 3 [Source:HGNC Symbol;Acc:HGNC:1553]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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