Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s66.

Sample reads: 391,635. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 19473.07 49722.51 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. RPS27 ENSG00000177954 6333.02 16170.72 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
3. EEF1A1 ENSG00000156508 5099.45 13020.93 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
4. RPS12 ENSG00000112306 3901.94 9963.21 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
5. RPL31 ENSG00000071082 3844.95 9817.69 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
6. RPL37 ENSG00000145592 3663.49 9354.35 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
7. RPL34 ENSG00000109475 3040.60 7763.86 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
8. SFRP1 ENSG00000104332 2969.06 7581.19 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
9. RPS15A ENSG00000134419 2825.99 7215.88 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
10. RPL23 ENSG00000125691 2709.08 6917.36 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
11. RPS20 ENSG00000008988 2563.68 6546.10 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
12. RPL10A ENSG00000198755 2492.73 6364.93 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
13. COL3A1 ENSG00000168542 2392.11 6108.01 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
14. RPS29 ENSG00000213741 2340.35 5975.85 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
15. RPS23 ENSG00000186468 2325.81 5938.72 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
16. RPL5 ENSG00000122406 2133.88 5448.65 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
17. RPS3A ENSG00000145425 2072.23 5291.23 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
18. ACTB ENSG00000075624 1977.43 5049.17 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
19. HIST1H4C ENSG00000197061 1971.62 5034.33 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
20. RPL15 ENSG00000174748 1932.07 4933.34 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
21. ACTG1 ENSG00000184009 1925.09 4915.52 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
22. RPL30 ENSG00000156482 1812.26 4627.42 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
23. TPT1 ENSG00000133112 1784.92 4557.61 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
24. RPL11 ENSG00000142676 1681.40 4293.28 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
25. RPS6 ENSG00000137154 1638.94 4184.87 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
26. DLK1 ENSG00000185559 1616.84 4128.44 delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
27. PPIA ENSG00000196262 1594.16 4070.53 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
28. RPS27A ENSG00000143947 1591.25 4063.10 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
29. PTMA ENSG00000187514 1566.83 4000.74 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
30. RPL9 ENSG00000163682 1508.67 3852.24 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
31. MTRNR2L8 ENSG00000255823 1410.96 3602.74 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
32. MALAT1 ENSG00000251562 1359.78 3472.06 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
33. RPS13 ENSG00000110700 1326.04 3385.91 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
34. MTRNR2L1 ENSG00000256618 1207.98 3084.45 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
35. NPM1 ENSG00000181163 1201.00 3066.63 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
36. GNAS ENSG00000087460 1177.15 3005.73 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
37. TMSB4X ENSG00000205542 1174.83 2999.81 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
38. HNRNPC ENSG00000092199 1117.25 2852.78 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
39. RPL26 ENSG00000161970 1080.03 2757.75 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
40. RPL7A ENSG00000148303, ENSG00000280858 1066.07 2722.10 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
41. RPL32 ENSG00000144713 1036.41 2646.37 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
42. UBB ENSG00000170315 1026.52 2621.11 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
43. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 983.48 2511.22 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
44. RPS25 ENSG00000118181, ENSG00000280831 963.71 2460.74 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
45. RPL22 ENSG00000116251 959.64 2450.34 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
46. RPL35 ENSG00000136942 954.98 2438.44 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
47. HMGB1 ENSG00000189403 949.17 2423.61 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
48. VIM ENSG00000026025 939.28 2398.36 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
49. RPS5 ENSG00000083845 935.21 2387.96 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
50. RPL18A ENSG00000105640 926.49 2365.70 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
51. RPL10 ENSG00000147403 904.39 2309.27 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
52. RPL39 ENSG00000198918 895.08 2285.50 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
53. RPS7 ENSG00000171863 894.50 2284.02 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
54. RPL35A ENSG00000182899 888.10 2267.67 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
55. EIF4G2 ENSG00000110321 878.79 2243.90 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
56. RPS11 ENSG00000142534 861.93 2200.85 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
57. RPL13AP20 ENSG00000234498 846.23 2160.76 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
58. MORF4L1 ENSG00000185787 841.57 2148.86 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
59. TUBA1B ENSG00000123416 831.10 2122.13 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
60. RPS2 ENSG00000140988 829.36 2117.69 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
61. RPS8 ENSG00000142937 775.85 1981.05 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
62. RPS24 ENSG00000138326 747.94 1909.79 ribosomal protein S24 [Source:HGNC Symbol;Acc:HGNC:10411]
63. RPS16 ENSG00000105193 739.79 1888.98 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
64. RPS28 ENSG00000233927 738.63 1886.02 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
65. COX7A2 ENSG00000112695 668.84 1707.82 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
66. RPS21 ENSG00000171858 668.84 1707.82 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
67. HBE1 ENSG00000213931 668.26 1706.33 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
68. HMGN1 ENSG00000205581 665.35 1698.90 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
69. TOMM6 ENSG00000214736 661.86 1689.99 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
70. RPL13 ENSG00000167526 653.72 1669.21 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
71. MDK ENSG00000110492 639.76 1633.56 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
72. H2AFZ ENSG00000164032 633.94 1618.70 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
73. HMGA2 ENSG00000149948 628.13 1603.87 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
74. FAU ENSG00000149806 626.38 1599.40 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
75. RPLP0 ENSG00000089157 607.77 1551.88 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
76. MYL6 ENSG00000092841 604.28 1542.97 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
77. HNRNPD ENSG00000138668 587.41 1499.89 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
78. ID2 ENSG00000115738 571.71 1459.80 inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]
79. TMEM258 ENSG00000134825 568.80 1452.37 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
80. RPL27A ENSG00000166441 561.24 1433.07 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
81. HNRNPK ENSG00000165119 560.66 1431.59 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
82. RPL7 ENSG00000147604 554.84 1416.73 ribosomal protein L7 [Source:HGNC Symbol;Acc:HGNC:10363]
83. SRP14 ENSG00000140319 548.45 1400.41 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
84. NUCKS1 ENSG00000069275 541.47 1382.59 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
85. RPL6 ENSG00000089009 535.07 1366.25 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
86. NGFRAP1 NGFRAP1 526.35 1343.98
87. SUMO2 ENSG00000188612 515.30 1315.77 small ubiquitin-like modifier 2 [Source:HGNC Symbol;Acc:HGNC:11125]
88. RPS14 ENSG00000164587 509.48 1300.91 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
89. GPC3 ENSG00000147257 505.41 1290.51 glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
90. RPL37A ENSG00000197756 498.43 1272.69 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
91. NDUFA4 ENSG00000189043 489.12 1248.92 NDUFA4, mitochondrial complex associated [Source:HGNC Symbol;Acc:HGNC:7687]
92. HSP90AB1 ENSG00000096384 485.63 1240.01 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
93. MARCKS ENSG00000277443 478.66 1222.21 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
94. MTRNR2L2 ENSG00000271043 478.66 1222.21 MT-RNR2 like 2 [Source:HGNC Symbol;Acc:HGNC:37156]
95. RPL23A ENSG00000198242 472.26 1205.87 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
96. UBA52 ENSG00000221983 467.60 1193.97 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
97. STMN1 ENSG00000117632 455.97 1164.27 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
98. PCBP2 ENSG00000197111 447.25 1142.01 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
99. TMA7 ENSG00000232112 444.92 1136.06 translation machinery associated 7 homolog [Source:HGNC Symbol;Acc:HGNC:26932]
100. CBX3 ENSG00000122565 440.85 1125.67 chromobox 3 [Source:HGNC Symbol;Acc:HGNC:1553]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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