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Experiment Human_35d_slice2, section s65.

Sample reads: 391,634. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. EEF1A1 ENSG00000156508 6780.23 17312.66 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
2. HIST1H4C ENSG00000197061 5970.24 15244.43 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
3. SFRP1 ENSG00000104332 5601.65 14303.27 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
4. RPL41 ENSG00000229117 4677.90 11944.57 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
5. RPS27 ENSG00000177954 2716.64 6936.68 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
6. PTMA ENSG00000187514 2662.04 6797.26 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
7. MALAT1 ENSG00000251562 2657.49 6785.64 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
8. RPL34 ENSG00000109475 2498.22 6378.96 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
9. RPS12 ENSG00000112306 2475.47 6320.87 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
10. ACTB ENSG00000075624 2398.11 6123.34 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
11. ACTG1 ENSG00000184009 2393.56 6111.72 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
12. COL3A1 ENSG00000168542 1979.46 5054.36 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
13. RPL9 ENSG00000163682 1897.55 4845.21 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
14. RPL37 ENSG00000145592 1874.80 4787.12 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
15. RPL31 ENSG00000071082 1792.89 4577.97 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
16. TPT1 ENSG00000133112 1756.49 4485.03 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
17. RPS29 ENSG00000213741 1606.32 4101.58 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
18. MORF4L1 ENSG00000185787 1528.96 3904.05 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
19. RPL5 ENSG00000122406 1460.71 3729.78 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
20. RPS23 ENSG00000186468 1351.50 3450.93 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
21. RPS3A ENSG00000145425 1301.44 3323.10 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
22. RPL30 ENSG00000156482 1296.89 3311.48 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
23. HMGB1 ENSG00000189403 1260.49 3218.54 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
24. RPL23 ENSG00000125691 1260.49 3218.54 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
25. MARCKS ENSG00000277443 1255.93 3206.90 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
26. HNRNPK ENSG00000165119 1219.53 3113.95 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
27. RPL15 ENSG00000174748 1196.78 3055.86 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
28. NUCKS1 ENSG00000069275 1183.13 3021.01 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
29. TUBA1B ENSG00000123416 1178.58 3009.39 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
30. NPM1 ENSG00000181163 1174.03 2997.77 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
31. RPS15A ENSG00000134419 1169.48 2986.15 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
32. EIF4G2 ENSG00000110321 1114.87 2846.71 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
33. GNAS ENSG00000087460 1096.67 2800.24 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
34. RPL10A ENSG00000198755 1005.66 2567.86 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
35. HMGA2 ENSG00000149948 987.46 2521.38 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
36. RPS6 ENSG00000137154 941.95 2405.18 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
37. HNRNPC ENSG00000092199 910.10 2323.85 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
38. CBX3 ENSG00000122565 891.90 2277.38 chromobox 3 [Source:HGNC Symbol;Acc:HGNC:1553]
39. RPS20 ENSG00000008988 819.09 2091.47 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
40. RPL22 ENSG00000116251 787.23 2010.12 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
41. RPL35 ENSG00000136942 782.68 1998.50 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
42. RPS7 ENSG00000171863 782.68 1998.50 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
43. NAP1L1 ENSG00000187109 769.03 1963.64 nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
44. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 769.03 1963.64 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
45. PCBP2 ENSG00000197111 764.48 1952.03 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
46. VIM ENSG00000026025 746.28 1905.55 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
47. ENAH ENSG00000154380 737.18 1882.32 ENAH, actin regulator [Source:HGNC Symbol;Acc:HGNC:18271]
48. PEG3 ENSG00000198300 709.88 1812.61 paternally expressed 3 [Source:HGNC Symbol;Acc:HGNC:8826]
49. RPL32 ENSG00000144713 709.88 1812.61 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
50. DLK1 ENSG00000185559 700.78 1789.37 delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
51. HNRNPA3 ENSG00000170144 696.22 1777.73 heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:HGNC:24941]
52. RPL11 ENSG00000142676 696.22 1777.73 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
53. ID2 ENSG00000115738 687.12 1754.49 inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]
54. PCBP1 ENSG00000169564 687.12 1754.49 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
55. RPS2 ENSG00000140988 687.12 1754.49 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
56. ITGB1 ENSG00000150093 682.57 1742.88 integrin subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:6153]
57. RPS8 ENSG00000142937 659.82 1684.79 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
58. PPIA ENSG00000196262 655.27 1673.17 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
59. PHACTR2 ENSG00000112419 646.17 1649.93 phosphatase and actin regulator 2 [Source:HGNC Symbol;Acc:HGNC:20956]
60. MTRNR2L1 ENSG00000256618 637.07 1626.70 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
61. HDAC2 ENSG00000196591 605.22 1545.37 histone deacetylase 2 [Source:HGNC Symbol;Acc:HGNC:4853]
62. RPS27A ENSG00000143947 596.11 1522.11 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
63. CCND2 ENSG00000118971 591.56 1510.49 cyclin D2 [Source:HGNC Symbol;Acc:HGNC:1583]
64. HMGN1 ENSG00000205581 568.81 1452.40 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
65. UBB ENSG00000170315 564.26 1440.78 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
66. ZNF770 ENSG00000198146 564.26 1440.78 zinc finger protein 770 [Source:HGNC Symbol;Acc:HGNC:26061]
67. ITM2B ENSG00000136156 559.71 1429.17 integral membrane protein 2B [Source:HGNC Symbol;Acc:HGNC:6174]
68. MATR3 ENSG00000015479, ENSG00000280987 550.61 1405.93 matrin 3 [Source:NCBI gene;Acc:9782]
69. TMPO ENSG00000120802 546.06 1394.31 thymopoietin [Source:HGNC Symbol;Acc:HGNC:11875]
70. RPL7A ENSG00000148303, ENSG00000280858 541.51 1382.69 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
71. COX7A2 ENSG00000112695 536.96 1371.08 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
72. RPL7 ENSG00000147604 532.41 1359.46 ribosomal protein L7 [Source:HGNC Symbol;Acc:HGNC:10363]
73. HNRNPH1 ENSG00000169045, ENSG00000284254 527.86 1347.84 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
74. MTRNR2L8 ENSG00000255823 527.86 1347.84 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
75. RPL26 ENSG00000161970 527.86 1347.84 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
76. STMN1 ENSG00000117632 518.76 1324.60 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
77. SUMO2 ENSG00000188612 509.65 1301.34 small ubiquitin-like modifier 2 [Source:HGNC Symbol;Acc:HGNC:11125]
78. TMSB4X ENSG00000205542 509.65 1301.34 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
79. YBX1 ENSG00000065978 509.65 1301.34 Y-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8014]
80. HSP90AA1 ENSG00000080824 505.10 1289.72 heat shock protein 90 alpha family class A member 1 [Source:HGNC Symbol;Acc:HGNC:5253]
81. HNRNPA1 ENSG00000135486 500.55 1278.11 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
82. NGFRAP1 NGFRAP1 482.35 1231.63
83. SRSF7 ENSG00000115875 482.35 1231.63 serine and arginine rich splicing factor 7 [Source:HGNC Symbol;Acc:HGNC:10789]
84. PEG10 ENSG00000242265 473.25 1208.40 paternally expressed 10 [Source:HGNC Symbol;Acc:HGNC:14005]
85. RAD21 ENSG00000164754 468.70 1196.78 RAD21 cohesin complex component [Source:HGNC Symbol;Acc:HGNC:9811]
86. TCEA1 ENSG00000187735 468.70 1196.78 transcription elongation factor A1 [Source:HGNC Symbol;Acc:HGNC:11612]
87. SHISA3 ENSG00000178343 464.15 1185.16 shisa family member 3 [Source:HGNC Symbol;Acc:HGNC:25159]
88. RPL10 ENSG00000147403 455.05 1161.93 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
89. ARRDC3 ENSG00000113369 445.95 1138.69 arrestin domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29263]
90. H2AFZ ENSG00000164032 445.95 1138.69 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
91. HSP90B1 ENSG00000166598 445.95 1138.69 heat shock protein 90 beta family member 1 [Source:HGNC Symbol;Acc:HGNC:12028]
92. NR2F1 ENSG00000175745 445.95 1138.69 nuclear receptor subfamily 2 group F member 1 [Source:HGNC Symbol;Acc:HGNC:7975]
93. HNRNPM ENSG00000099783 441.40 1127.07 heterogeneous nuclear ribonucleoprotein M [Source:HGNC Symbol;Acc:HGNC:5046]
94. PFN2 ENSG00000070087 441.40 1127.07 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
95. SRP14 ENSG00000140319 441.40 1127.07 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
96. ATRX ENSG00000085224 436.85 1115.45 ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
97. RPL39 ENSG00000198918 436.85 1115.45 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
98. HSPA5 ENSG00000044574 432.30 1103.84 heat shock protein family A (Hsp70) member 5 [Source:HGNC Symbol;Acc:HGNC:5238]
99. FN1 ENSG00000115414 427.75 1092.22 fibronectin 1 [Source:HGNC Symbol;Acc:HGNC:3778]
100. RPS13 ENSG00000110700 427.75 1092.22 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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