Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s56.

Sample reads: 391,648. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 21241.58 54236.42 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. HIST1H4C ENSG00000197061 5236.91 13371.47 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
3. RPS27 ENSG00000177954 4644.91 11859.91 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
4. EEF1A1 ENSG00000156508 4224.72 10787.04 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
5. RPS12 ENSG00000112306 3694.82 9434.03 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
6. RPL37 ENSG00000145592 3231.15 8250.14 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
7. RPL31 ENSG00000071082 2794.40 7134.98 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
8. ACTB ENSG00000075624 2750.93 7023.99 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
9. RPL34 ENSG00000109475 2614.32 6675.18 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
10. RPS15A ENSG00000134419 2452.86 6262.92 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
11. RPS23 ENSG00000186468 2326.60 5940.54 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
12. PPIA ENSG00000196262 2192.05 5596.99 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
13. RPL10A ENSG00000198755 2152.72 5496.57 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
14. RPL15 ENSG00000174748 2150.65 5491.28 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
15. RPL5 ENSG00000122406 2123.74 5422.57 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
16. TPT1 ENSG00000133112 2003.69 5116.05 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
17. RPS20 ENSG00000008988 1958.15 4999.77 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
18. ACTG1 ENSG00000184009 1931.24 4931.06 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
19. RPS29 ENSG00000213741 1860.86 4751.36 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
20. TUBA1B ENSG00000123416 1840.16 4698.51 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
21. PTMA ENSG00000187514 1784.28 4555.83 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
22. MTRNR2L1 ENSG00000256618 1740.81 4444.83 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
23. RPL23 ENSG00000125691 1697.34 4333.84 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
24. RPL18A ENSG00000105640 1670.43 4265.13 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
25. SFRP1 ENSG00000104332 1668.36 4259.85 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
26. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1653.87 4222.85 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
27. RPS6 ENSG00000137154 1436.53 3667.91 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
28. HNRNPC ENSG00000092199 1403.41 3583.35 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
29. RPL35 ENSG00000136942 1341.31 3424.79 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
30. RPL7A ENSG00000148303, ENSG00000280858 1333.03 3403.64 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
31. RPL11 ENSG00000142676 1279.21 3266.22 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
32. MTRNR2L8 ENSG00000255823 1270.93 3245.08 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
33. UBB ENSG00000170315 1264.72 3229.23 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
34. RPS3A ENSG00000145425 1239.89 3165.83 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
35. RPL10 ENSG00000147403 1229.54 3139.40 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
36. RPS5 ENSG00000083845 1206.77 3081.26 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
37. MYL6 ENSG00000092841 1202.63 3070.69 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
38. RPL13AP20 ENSG00000234498 1190.21 3038.98 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
39. H2AFZ ENSG00000164032 1184.00 3023.12 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
40. RPS27A ENSG00000143947 1184.00 3023.12 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
41. COX7A2 ENSG00000112695 1177.79 3007.27 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
42. RPS14 ENSG00000164587 1171.58 2991.41 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
43. GNAS ENSG00000087460 1134.32 2896.27 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
44. NPM1 ENSG00000181163 1107.41 2827.57 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
45. RPL30 ENSG00000156482 1099.13 2806.42 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
46. RPL26 ENSG00000161970 1070.15 2732.43 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
47. RPS8 ENSG00000142937 1070.15 2732.43 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
48. MDK ENSG00000110492 1057.73 2700.72 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
49. TMSB4X ENSG00000205542 1053.59 2690.15 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
50. RPL9 ENSG00000163682 1051.52 2684.86 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
51. RPS16 ENSG00000105193 1051.52 2684.86 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
52. HBE1 ENSG00000213931 1045.31 2669.00 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
53. RPL32 ENSG00000144713 1037.03 2647.86 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
54. RPLP0 ENSG00000089157 1008.05 2573.87 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
55. RPS11 ENSG00000142534 1005.98 2568.58 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
56. COL3A1 ENSG00000168542 999.77 2552.73 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
57. DLK1 ENSG00000185559 966.66 2468.19 delta like non-canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2907]
58. RPS7 ENSG00000171863 964.59 2462.90 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
59. RPS28 ENSG00000233927 954.24 2436.47 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
60. SERF2 ENSG00000140264 916.98 2341.34 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
61. RPS2 ENSG00000140988 863.16 2203.92 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
62. TOMM6 ENSG00000214736 846.60 2161.64 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
63. NGFRAP1 NGFRAP1 832.11 2124.64
64. RPS13 ENSG00000110700 830.04 2119.35 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
65. EIF4G2 ENSG00000110321 827.97 2114.07 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
66. VIM ENSG00000026025 817.62 2087.64 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
67. SRP14 ENSG00000140319 813.48 2077.07 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
68. RPL13 ENSG00000167526 805.20 2055.93 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
69. RPL35A ENSG00000182899 763.80 1950.22 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
70. FAU ENSG00000149806 761.73 1944.94 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
71. RPS25 ENSG00000118181, ENSG00000280831 751.38 1918.51 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
72. MORF4L1 ENSG00000185787 749.31 1913.22 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
73. PFN1 ENSG00000108518 738.96 1886.80 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
74. RPL39 ENSG00000198918 730.68 1865.66 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
75. HSP90AB1 ENSG00000096384 705.84 1802.23 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
76. TMEM258 ENSG00000134825 654.10 1670.12 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
77. HMGA2 ENSG00000149948 641.68 1638.41 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
78. RPL27A ENSG00000166441 623.05 1590.84 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
79. HMGB1 ENSG00000189403 616.84 1574.99 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
80. PEG10 ENSG00000242265 608.56 1553.84 paternally expressed 10 [Source:HGNC Symbol;Acc:HGNC:14005]
81. RPL22 ENSG00000116251 600.28 1532.70 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
82. HMGN1 ENSG00000205581 598.21 1527.42 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
83. CAPNS1 ENSG00000126247 587.86 1500.99 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
84. GABARAP ENSG00000170296 579.58 1479.85 GABA type A receptor-associated protein [Source:HGNC Symbol;Acc:HGNC:4067]
85. RPL37A ENSG00000197756 579.58 1479.85 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
86. UBA52 ENSG00000221983 577.51 1474.56 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
87. ITM2B ENSG00000136156 563.02 1437.57 integral membrane protein 2B [Source:HGNC Symbol;Acc:HGNC:6174]
88. GAPDH ENSG00000111640 554.74 1416.43 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
89. TPM1 ENSG00000140416 550.60 1405.85 tropomyosin 1 [Source:HGNC Symbol;Acc:HGNC:12010]
90. HNRNPD ENSG00000138668 546.46 1395.28 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
91. RPS24 ENSG00000138326 529.90 1353.00 ribosomal protein S24 [Source:HGNC Symbol;Acc:HGNC:10411]
92. STMN1 ENSG00000117632 515.41 1316.00 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
93. HNRNPK ENSG00000165119 498.85 1273.72 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
94. SUMO2 ENSG00000188612 492.64 1257.86 small ubiquitin-like modifier 2 [Source:HGNC Symbol;Acc:HGNC:11125]
95. RPS19 ENSG00000105372 480.22 1226.15 ribosomal protein S19 [Source:HGNC Symbol;Acc:HGNC:10402]
96. RPS9 ENSG00000170889, ENSG00000274646, ENSG00000274950, ENSG00000278270 478.15 1220.87 ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:10442]
97. NUCKS1 ENSG00000069275 476.08 1215.58 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
98. RPL4 ENSG00000174444 474.01 1210.30 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
99. RPL6 ENSG00000089009 469.87 1199.73 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
100. RPL14 ENSG00000188846 467.80 1194.44 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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