Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s55.

Sample reads: 391,647. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 16632.51 42468.13 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. RPS27 ENSG00000177954 11372.61 29037.92 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
3. EEF1A1 ENSG00000156508 6877.03 17559.26 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
4. SFRP1 ENSG00000104332 6677.48 17049.75 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
5. RPS12 ENSG00000112306 3576.88 9132.92 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
6. RPL31 ENSG00000071082 2695.84 6883.34 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
7. RPL34 ENSG00000109475 2678.90 6840.09 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
8. RPL37 ENSG00000145592 2643.13 6748.76 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
9. ACTB ENSG00000075624 2620.54 6691.08 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
10. RPS29 ENSG00000213741 2620.54 6691.08 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
11. HIST1H4C ENSG00000197061 2533.94 6469.96 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
12. RPS20 ENSG00000008988 2462.40 6287.30 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
13. TUBA1B ENSG00000123416 2458.64 6277.70 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
14. PPIA ENSG00000196262 2245.91 5734.53 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
15. RPS15A ENSG00000134419 2174.37 5551.86 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
16. RPL10A ENSG00000198755 2136.72 5455.73 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
17. RPS23 ENSG00000186468 2117.89 5407.65 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
18. ACTG1 ENSG00000184009 2055.77 5249.04 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
19. HNRNPC ENSG00000092199 2016.23 5148.08 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
20. RPL23 ENSG00000125691 1937.16 4946.19 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
21. RPS3A ENSG00000145425 1935.28 4941.39 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
22. MTRNR2L8 ENSG00000255823 1912.69 4883.71 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
23. RPL15 ENSG00000174748 1833.62 4681.82 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
24. TPT1 ENSG00000133112 1745.14 4455.90 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
25. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1733.85 4427.08 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
26. RPL5 ENSG00000122406 1726.32 4407.85 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
27. PTMA ENSG00000187514 1632.19 4167.50 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
28. COL3A1 ENSG00000168542 1624.66 4148.28 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
29. RPL13AP20 ENSG00000234498 1596.42 4076.17 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
30. RPS6 ENSG00000137154 1570.06 4008.87 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
31. RPL35 ENSG00000136942 1541.82 3936.76 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
32. RPL11 ENSG00000142676 1538.06 3927.16 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
33. RPL18A ENSG00000105640 1458.99 3725.27 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
34. RPS5 ENSG00000083845 1419.46 3624.34 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
35. MTRNR2L1 ENSG00000256618 1381.81 3528.20 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
36. RPS27A ENSG00000143947 1372.39 3504.15 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
37. NPM1 ENSG00000181163 1346.04 3436.87 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
38. RPL32 ENSG00000144713 1231.20 3143.65 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
39. RPS16 ENSG00000105193 1223.67 3124.42 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
40. COX7A2 ENSG00000112695 1189.78 3037.89 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
41. RPS11 ENSG00000142534 1174.72 2999.44 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
42. H2AFZ ENSG00000164032 1161.55 2965.81 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
43. RPS13 ENSG00000110700 1125.78 2874.48 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
44. RPL10 ENSG00000147403 1112.60 2840.82 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
45. RPL26 ENSG00000161970 1067.42 2725.47 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
46. MDK ENSG00000110492 1061.77 2711.04 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
47. RPL9 ENSG00000163682 1052.36 2687.01 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
48. RPS14 ENSG00000164587 995.88 2542.80 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
49. RPL30 ENSG00000156482 969.52 2475.50 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
50. GNAS ENSG00000087460 956.35 2441.87 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
51. NGFRAP1 NGFRAP1 935.64 2388.99
52. UBB ENSG00000170315 918.69 2345.71 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
53. RPL22 ENSG00000116251 911.16 2326.48 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
54. MYL6 ENSG00000092841 907.40 2316.88 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
55. HBE1 ENSG00000213931 892.34 2278.43 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
56. RPS8 ENSG00000142937 879.16 2244.78 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
57. MORF4L1 ENSG00000185787 873.51 2230.35 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
58. HMGB1 ENSG00000189403 871.63 2225.55 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
59. RPL7A ENSG00000148303, ENSG00000280858 841.51 2148.64 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
60. RPS28 ENSG00000233927 835.86 2134.22 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
61. RPS7 ENSG00000171863 833.98 2129.42 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
62. TOMM6 ENSG00000214736 832.10 2124.62 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
63. SRP14 ENSG00000140319 828.33 2114.99 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
64. SERF2 ENSG00000140264 826.45 2110.19 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
65. RPL39 ENSG00000198918 822.68 2100.57 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
66. RPLP0 ENSG00000089157 809.51 2066.94 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
67. EIF4G2 ENSG00000110321 792.56 2023.66 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
68. HMGN1 ENSG00000205581 783.15 1999.63 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
69. RPS24 ENSG00000138326 773.74 1975.61 ribosomal protein S24 [Source:HGNC Symbol;Acc:HGNC:10411]
70. RPS25 ENSG00000118181, ENSG00000280831 758.68 1937.15 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
71. UBA52 ENSG00000221983 756.79 1932.33 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
72. NUCKS1 ENSG00000069275 743.62 1898.70 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
73. VIM ENSG00000026025 741.73 1893.87 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
74. RPS2 ENSG00000140988 719.14 1836.20 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
75. TMSB4X ENSG00000205542 715.38 1826.59 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
76. RPL27A ENSG00000166441 709.73 1812.17 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
77. PEG10 ENSG00000242265 704.08 1797.74 paternally expressed 10 [Source:HGNC Symbol;Acc:HGNC:14005]
78. FAU ENSG00000149806 700.32 1788.14 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
79. HSP90AB1 ENSG00000096384 690.90 1764.09 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
80. RPL13 ENSG00000167526 658.90 1682.38 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
81. RPL37A ENSG00000197756 658.90 1682.38 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
82. RPS21 ENSG00000171858 645.72 1648.73 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
83. HINT1 ENSG00000169567 630.66 1610.28 histidine triad nucleotide binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4912]
84. HNRNPD ENSG00000138668 613.72 1567.02 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
85. PFN1 ENSG00000108518 613.72 1567.02 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
86. RPL35A ENSG00000182899 600.54 1533.37 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
87. HMGA2 ENSG00000149948 591.13 1509.34 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
88. RPL6 ENSG00000089009 577.95 1475.69 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
89. RPL14 ENSG00000188846 572.30 1461.27 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
90. RPL4 ENSG00000174444 561.01 1432.44 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
91. HSPA8 ENSG00000109971 557.24 1422.81 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
92. TMEM258 ENSG00000134825 557.24 1422.81 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
93. STMN1 ENSG00000117632 549.71 1403.59 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
94. GAPDH ENSG00000111640 515.82 1317.05 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
95. RPS18 ENSG00000096150, ENSG00000223367, ENSG00000226225, ENSG00000227794, ENSG00000231500, ENSG00000235650 498.88 1273.80 ribosomal protein S18 [Source:HGNC Symbol;Acc:HGNC:10401]
96. LINC00504 ENSG00000248360 497.00 1269.00 long intergenic non-protein coding RNA 504 [Source:HGNC Symbol;Acc:HGNC:43555]
97. PGAM1 ENSG00000171314 487.59 1244.97 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
98. HNRNPK ENSG00000165119 474.41 1211.32 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
99. KCTD12 ENSG00000178695 472.53 1206.52 potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]
100. KCNQ1OT1 ENSG00000269821 457.46 1168.04 KCNQ1 opposite strand/antisense transcript 1 [Source:HGNC Symbol;Acc:HGNC:6295]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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