Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s54.

Sample reads: 391,649. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 17785.36 45411.49 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. HIST1H4C ENSG00000197061 11789.03 30101.02 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
3. RPS27 ENSG00000177954 5090.72 12998.17 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
4. SFRP1 ENSG00000104332 4077.93 10412.21 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
5. EEF1A1 ENSG00000156508 3879.66 9905.96 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
6. RPL37 ENSG00000145592 3467.05 8852.44 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
7. RPS12 ENSG00000112306 3375.95 8619.84 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
8. RPL34 ENSG00000109475 3311.65 8455.66 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
9. RPS23 ENSG00000186468 3081.22 7867.30 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
10. RPL31 ENSG00000071082 2845.44 7265.28 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
11. RPS15A ENSG00000134419 2609.66 6663.26 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
12. ACTB ENSG00000075624 2454.26 6266.48 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
13. RPS29 ENSG00000213741 2320.30 5924.44 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
14. TPT1 ENSG00000133112 2159.54 5513.97 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
15. PTMA ENSG00000187514 2052.36 5240.31 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
16. RPS20 ENSG00000008988 1875.53 4788.80 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
17. RPL15 ENSG00000174748 1838.02 4693.03 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
18. RPL23 ENSG00000125691 1763.00 4501.48 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
19. ACTG1 ENSG00000184009 1746.92 4460.42 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
20. TUBA1B ENSG00000123416 1746.92 4460.42 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
21. RPL10A ENSG00000198755 1730.84 4419.37 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
22. RPL5 ENSG00000122406 1677.26 4282.56 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
23. RPS3A ENSG00000145425 1532.57 3913.12 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
24. RPL35 ENSG00000136942 1489.70 3803.66 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
25. HNRNPC ENSG00000092199 1430.76 3653.17 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
26. RPL9 ENSG00000163682 1420.04 3625.80 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
27. PPIA ENSG00000196262 1377.17 3516.34 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
28. RPS6 ENSG00000137154 1366.46 3488.99 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
29. COX7A2 ENSG00000112695 1334.30 3406.88 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
30. RPL18A ENSG00000105640 1323.59 3379.53 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
31. COL3A1 ENSG00000168542 1312.87 3352.16 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
32. RPL30 ENSG00000156482 1237.85 3160.61 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
33. RPL13AP20 ENSG00000234498 1232.49 3146.93 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
34. NPM1 ENSG00000181163 1216.41 3105.87 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
35. H2AFZ ENSG00000164032 1189.62 3037.47 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
36. RPS5 ENSG00000083845 1146.75 2928.01 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
37. UBB ENSG00000170315 1050.30 2681.74 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
38. RPS27A ENSG00000143947 1039.58 2654.37 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
39. RPS16 ENSG00000105193 1007.43 2572.28 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
40. RPS8 ENSG00000142937 1007.43 2572.28 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
41. RPL32 ENSG00000144713 996.71 2544.91 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
42. HMGB1 ENSG00000189403 964.56 2462.82 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
43. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 964.56 2462.82 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
44. EIF4G2 ENSG00000110321 948.48 2421.76 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
45. VIM ENSG00000026025 948.48 2421.76 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
46. RPL10 ENSG00000147403 932.41 2380.73 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
47. RPL11 ENSG00000142676 905.61 2312.30 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
48. RPL7A ENSG00000148303, ENSG00000280858 900.25 2298.61 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
49. MORF4L1 ENSG00000185787 894.89 2284.93 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
50. RPL26 ENSG00000161970 894.89 2284.93 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
51. RPS11 ENSG00000142534 894.89 2284.93 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
52. RPS7 ENSG00000171863 884.18 2257.58 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
53. RPS14 ENSG00000164587 868.10 2216.53 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
54. RPS13 ENSG00000110700 814.51 2079.69 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
55. HMGA2 ENSG00000149948 803.80 2052.35 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
56. RPL39 ENSG00000198918 798.44 2038.66 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
57. ITM2B ENSG00000136156 771.65 1970.26 integral membrane protein 2B [Source:HGNC Symbol;Acc:HGNC:6174]
58. MYL6 ENSG00000092841 771.65 1970.26 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
59. RPL22 ENSG00000116251 744.85 1901.83 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
60. RPS2 ENSG00000140988 744.85 1901.83 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
61. RPS25 ENSG00000118181, ENSG00000280831 744.85 1901.83 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
62. HBE1 ENSG00000213931 734.14 1874.49 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
63. HNRNPK ENSG00000165119 728.78 1860.80 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
64. MTRNR2L1 ENSG00000256618 723.42 1847.11 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
65. RPS28 ENSG00000233927 718.06 1833.43 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
66. SRP14 ENSG00000140319 712.70 1819.74 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
67. ID2 ENSG00000115738 707.34 1806.06 inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]
68. MARCKS ENSG00000277443 691.27 1765.02 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
69. MTRNR2L8 ENSG00000255823 685.91 1751.34 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
70. RPL35A ENSG00000182899 685.91 1751.34 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
71. NGFRAP1 NGFRAP1 664.47 1696.60
72. TMSB4X ENSG00000205542 653.76 1669.25 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
73. NUCKS1 ENSG00000069275 616.24 1573.45 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
74. FAU ENSG00000149806 594.81 1518.73 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
75. GNAS ENSG00000087460 594.81 1518.73 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
76. PFN2 ENSG00000070087 589.45 1505.05 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
77. RPL13 ENSG00000167526 584.09 1491.36 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
78. ITGB1 ENSG00000150093 568.02 1450.33 integrin subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:6153]
79. MDK ENSG00000110492 568.02 1450.33 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
80. SERF2 ENSG00000140264 562.66 1436.64 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
81. CBX3 ENSG00000122565 551.94 1409.27 chromobox 3 [Source:HGNC Symbol;Acc:HGNC:1553]
82. PCBP1 ENSG00000169564 551.94 1409.27 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
83. ZFP36L1 ENSG00000185650 546.58 1395.59 ZFP36 ring finger protein like 1 [Source:HGNC Symbol;Acc:HGNC:1107]
84. PEG10 ENSG00000242265 519.79 1327.18 paternally expressed 10 [Source:HGNC Symbol;Acc:HGNC:14005]
85. RPLP0 ENSG00000089157 514.43 1313.50 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
86. HNRNPD ENSG00000138668 509.07 1299.81 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
87. MALAT1 ENSG00000251562 509.07 1299.81 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
88. HINT1 ENSG00000169567 503.71 1286.13 histidine triad nucleotide binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4912]
89. RPL27A ENSG00000166441 498.35 1272.44 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
90. RPS24 ENSG00000138326 498.35 1272.44 ribosomal protein S24 [Source:HGNC Symbol;Acc:HGNC:10411]
91. TOMM6 ENSG00000214736 493.00 1258.78 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
92. PCBP2 ENSG00000197111 487.64 1245.09 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
93. STMN1 ENSG00000117632 487.64 1245.09 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
94. PGAM1 ENSG00000171314 482.28 1231.41 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
95. COX7B ENSG00000131174 476.92 1217.72 cytochrome c oxidase subunit 7B [Source:HGNC Symbol;Acc:HGNC:2291]
96. HSPA8 ENSG00000109971 471.56 1204.04 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
97. RPS9 ENSG00000170889, ENSG00000274646, ENSG00000274950, ENSG00000278270 471.56 1204.04 ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:10442]
98. SRSF3 ENSG00000112081 471.56 1204.04 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
99. TCF12 ENSG00000140262 471.56 1204.04 transcription factor 12 [Source:HGNC Symbol;Acc:HGNC:11623]
100. TMEM258 ENSG00000134825 466.20 1190.35 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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