Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s46.

Sample reads: 391,663. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 14417.53 36811.06 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. HIST1H4C ENSG00000197061 5906.26 15079.96 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
3. RPS27 ENSG00000177954 4693.74 11984.13 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
4. EEF1A1 ENSG00000156508 4649.48 11871.13 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
5. TUBA1B ENSG00000123416 4083.05 10424.91 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
6. ACTB ENSG00000075624 2917.73 7449.59 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
7. RPS12 ENSG00000112306 2832.17 7231.14 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
8. PTMA ENSG00000187514 2731.87 6975.05 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
9. RPL31 ENSG00000071082 2531.25 6462.83 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
10. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2516.50 6425.17 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
11. PPIA ENSG00000196262 2268.69 5792.45 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
12. RPL5 ENSG00000122406 2234.76 5705.82 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
13. RPL37 ENSG00000145592 2203.78 5626.73 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
14. RPL10A ENSG00000198755 2110.85 5389.46 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
15. RPL15 ENSG00000174748 2093.15 5344.26 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
16. RPL23 ENSG00000125691 2045.95 5223.75 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
17. RPL34 ENSG00000109475 2019.40 5155.96 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
18. ACTG1 ENSG00000184009 2016.45 5148.43 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
19. RPS23 ENSG00000186468 1969.25 5027.92 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
20. HNRNPC ENSG00000092199 1902.87 4858.44 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
21. RPL18A ENSG00000105640 1832.06 4677.64 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
22. RPS20 ENSG00000008988 1784.86 4557.13 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
23. TPT1 ENSG00000133112 1755.36 4481.81 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
24. RPS15A ENSG00000134419 1619.65 4135.32 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
25. GNAS ENSG00000087460 1569.50 4007.27 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
26. MDK ENSG00000110492 1420.51 3626.87 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
27. RPL7A ENSG00000148303, ENSG00000280858 1419.04 3623.12 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
28. RPS29 ENSG00000213741 1419.04 3623.12 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
29. RPS6 ENSG00000137154 1351.18 3449.85 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
30. RPS5 ENSG00000083845 1324.63 3382.07 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
31. RPL10 ENSG00000147403 1295.13 3306.75 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
32. RPS3A ENSG00000145425 1275.95 3257.78 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
33. RPS2 ENSG00000140988 1240.55 3167.39 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
34. HMGB1 ENSG00000189403 1233.18 3148.57 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
35. RPL13AP20 ENSG00000234498 1224.32 3125.95 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
36. RPL11 ENSG00000142676 1205.15 3077.01 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
37. RPL35 ENSG00000136942 1203.67 3073.23 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
38. HSP90AB1 ENSG00000096384 1191.87 3043.10 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
39. UBB ENSG00000170315 1183.02 3020.51 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
40. RPS11 ENSG00000142534 1146.15 2926.37 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
41. MTRNR2L1 ENSG00000256618 1138.77 2907.53 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
42. RPS16 ENSG00000105193 1100.42 2809.61 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
43. NPM1 ENSG00000181163 1075.34 2745.57 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
44. MTRNR2L8 ENSG00000255823 1069.44 2730.51 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
45. RPS8 ENSG00000142937 1044.36 2666.48 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
46. RPS27A ENSG00000143947 1039.94 2655.19 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
47. TMSB4X ENSG00000205542 1034.04 2640.13 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
48. RPS13 ENSG00000110700 1026.66 2621.28 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
49. RPL32 ENSG00000144713 1006.01 2568.56 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
50. RPL13 ENSG00000167526 992.74 2534.68 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
51. MYL6 ENSG00000092841 927.83 2368.95 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
52. RPL30 ENSG00000156482 917.51 2342.60 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
53. HNRNPD ENSG00000138668 910.13 2323.76 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
54. COX7A2 ENSG00000112695 893.90 2282.32 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
55. H2AFZ ENSG00000164032 885.05 2259.72 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
56. GAPDH ENSG00000111640 867.35 2214.53 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
57. RPS28 ENSG00000233927 859.98 2195.71 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
58. RPS14 ENSG00000164587 855.55 2184.40 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
59. RPLP0 ENSG00000089157 848.18 2165.59 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
60. VIM ENSG00000026025 845.23 2158.05 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
61. NNAT ENSG00000053438 823.10 2101.55 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
62. NGFRAP1 NGFRAP1 815.72 2082.71
63. HMGA2 ENSG00000149948 812.77 2075.18 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
64. RPL9 ENSG00000163682 811.30 2071.42 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
65. TOMM6 ENSG00000214736 803.92 2052.58 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
66. PFN1 ENSG00000108518 795.07 2029.99 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
67. SERF2 ENSG00000140264 784.75 2003.64 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
68. EIF4G2 ENSG00000110321 781.80 1996.10 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
69. RPL22 ENSG00000116251 733.12 1871.81 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
70. HMGN1 ENSG00000205581 710.99 1815.31 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
71. NUCKS1 ENSG00000069275 696.24 1777.65 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
72. STMN1 ENSG00000117632 694.77 1773.90 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
73. SFRP1 ENSG00000104332 693.29 1770.12 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
74. RPL26 ENSG00000161970 687.39 1755.05 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
75. MORF4L1 ENSG00000185787 678.54 1732.46 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
76. SRP14 ENSG00000140319 665.27 1698.58 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
77. IFITM2 ENSG00000185201 647.56 1653.36 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
78. CFL1 ENSG00000172757 640.19 1634.54 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
79. FAU ENSG00000149806 637.24 1627.01 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
80. PGAM1 ENSG00000171314 631.34 1611.95 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
81. COL3A1 ENSG00000168542 615.11 1570.51 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
82. RPS25 ENSG00000118181, ENSG00000280831 603.31 1540.38 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
83. RPL39 ENSG00000198918 578.24 1476.37 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
84. PBX1 ENSG00000185630 573.81 1465.06 PBX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8632]
85. UBA52 ENSG00000221983 572.34 1461.31 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
86. RPL3 ENSG00000100316 569.38 1453.75 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
87. RPS7 ENSG00000171863 569.38 1453.75 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
88. CAPNS1 ENSG00000126247 564.96 1442.46 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
89. PEG10 ENSG00000242265 563.48 1438.69 paternally expressed 10 [Source:HGNC Symbol;Acc:HGNC:14005]
90. RPL35A ENSG00000182899 554.63 1416.09 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
91. RPL27A ENSG00000166441 550.21 1404.80 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
92. TMEM258 ENSG00000134825 548.73 1401.03 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
93. PFN2 ENSG00000070087 547.26 1397.27 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
94. RPS9 ENSG00000170889, ENSG00000274646, ENSG00000274950, ENSG00000278270 536.93 1370.90 ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:10442]
95. SRSF2 ENSG00000161547 529.56 1352.08 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
96. RPL4 ENSG00000174444 528.08 1348.30 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
97. RPLP1 ENSG00000137818 528.08 1348.30 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
98. MARCKSL1 ENSG00000175130 525.13 1340.77 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
99. HNRNPK ENSG00000165119 523.66 1337.02 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
100. HSPA8 ENSG00000109971 519.23 1325.71 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA