Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s45.

Sample reads: 391,650. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 11420.78 29160.68 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. HIST1H4C ENSG00000197061 8057.53 20573.30 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
3. RPS27 ENSG00000177954 6058.70 15469.68 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
4. EEF1A1 ENSG00000156508 4662.41 11904.53 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
5. RPS12 ENSG00000112306 3150.77 8044.86 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
6. ACTB ENSG00000075624 3114.34 7951.85 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
7. TUBA1B ENSG00000123416 2976.23 7599.21 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
8. PTMA ENSG00000187514 2906.42 7420.96 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
9. RPL31 ENSG00000071082 2486.01 6347.53 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
10. RPL34 ENSG00000109475 2457.17 6273.89 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
11. ACTG1 ENSG00000184009 2405.57 6142.14 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
12. RPL18A ENSG00000105640 2249.25 5743.01 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
13. RPL37 ENSG00000145592 2206.75 5634.50 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
14. RPL15 ENSG00000174748 2146.04 5479.49 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
15. RPS20 ENSG00000008988 2133.90 5448.49 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
16. PPIA ENSG00000196262 2038.29 5204.37 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
17. RPS23 ENSG00000186468 1933.56 4936.96 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
18. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1929.01 4925.34 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
19. GNAS ENSG00000087460 1850.09 4723.84 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
20. RPL10A ENSG00000198755 1784.83 4557.21 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
21. HNRNPC ENSG00000092199 1721.08 4394.43 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
22. MDK ENSG00000110492 1683.14 4297.56 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
23. RPL5 ENSG00000122406 1675.55 4278.18 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
24. RPS15A ENSG00000134419 1646.72 4204.57 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
25. RPS2 ENSG00000140988 1626.99 4154.19 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
26. RPL35 ENSG00000136942 1619.40 4134.81 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
27. TPT1 ENSG00000133112 1578.42 4030.18 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
28. RPL23 ENSG00000125691 1523.78 3890.67 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
29. RPS6 ENSG00000137154 1508.61 3851.93 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
30. RPS29 ENSG00000213741 1485.84 3793.80 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
31. RPL13AP20 ENSG00000234498 1479.77 3778.30 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
32. HSP90AB1 ENSG00000096384 1447.90 3696.92 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
33. RPS5 ENSG00000083845 1441.83 3681.43 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
34. RPL7A ENSG00000148303, ENSG00000280858 1385.67 3538.03 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
35. RPS3A ENSG00000145425 1285.50 3282.27 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
36. RPS11 ENSG00000142534 1265.77 3231.89 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
37. RPL10 ENSG00000147403 1261.22 3220.27 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
38. RPS16 ENSG00000105193 1247.56 3185.40 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
39. NNAT ENSG00000053438 1135.25 2898.63 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
40. UBB ENSG00000170315 1126.14 2875.37 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
41. ACTC1 ENSG00000159251 1086.68 2774.62 actin, alpha, cardiac muscle 1 [Source:HGNC Symbol;Acc:HGNC:143]
42. RPLP0 ENSG00000089157 1079.09 2755.24 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
43. MTRNR2L1 ENSG00000256618 1059.36 2704.86 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
44. HMGB1 ENSG00000189403 1054.81 2693.25 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
45. RPL9 ENSG00000163682 1053.29 2689.37 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
46. RPS8 ENSG00000142937 1050.26 2681.63 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
47. COX7A2 ENSG00000112695 1035.08 2642.87 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
48. RPL11 ENSG00000142676 1030.53 2631.25 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
49. RPL13 ENSG00000167526 981.96 2507.24 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
50. PFN1 ENSG00000108518 968.30 2472.36 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
51. NPM1 ENSG00000181163 962.23 2456.86 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
52. MTRNR2L8 ENSG00000255823 940.98 2402.60 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
53. MYL6 ENSG00000092841 940.98 2402.60 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
54. RPS13 ENSG00000110700 922.77 2356.11 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
55. RPL30 ENSG00000156482 913.66 2332.85 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
56. RPL32 ENSG00000144713 910.63 2325.11 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
57. NGFRAP1 NGFRAP1 907.59 2317.35
58. RPS28 ENSG00000233927 872.68 2228.21 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
59. RPS27A ENSG00000143947 866.61 2212.72 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
60. RPS14 ENSG00000164587 859.02 2193.34 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
61. CFL1 ENSG00000172757 837.78 2139.10 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
62. TMSB4X ENSG00000205542 824.12 2104.23 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
63. RPL22 ENSG00000116251 799.83 2042.21 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
64. EIF4G2 ENSG00000110321 792.25 2022.85 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
65. HMGN1 ENSG00000205581 783.14 1999.59 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
66. STMN1 ENSG00000117632 781.62 1995.71 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
67. VIM ENSG00000026025 778.59 1987.97 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
68. GAPDH ENSG00000111640 775.55 1980.21 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
69. TOMM6 ENSG00000214736 758.86 1937.60 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
70. SERF2 ENSG00000140264 757.34 1933.72 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
71. RPS7 ENSG00000171863 740.64 1891.08 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
72. RPL27A ENSG00000166441 737.61 1883.34 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
73. RPL26 ENSG00000161970 726.98 1856.20 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
74. H2AFZ ENSG00000164032 696.63 1778.71 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
75. FAU ENSG00000149806 693.59 1770.94 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
76. SRP14 ENSG00000140319 693.59 1770.94 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
77. RPL39 ENSG00000198918 692.08 1767.09 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
78. HNRNPD ENSG00000138668 679.93 1736.07 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
79. UBA52 ENSG00000221983 676.90 1728.33 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
80. HMGA2 ENSG00000149948 673.86 1720.57 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
81. CAPNS1 ENSG00000126247 664.76 1697.33 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
82. SFRP1 ENSG00000104332 664.76 1697.33 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
83. IFITM2 ENSG00000185201 654.13 1670.19 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
84. RPS9 ENSG00000170889, ENSG00000274646, ENSG00000274950, ENSG00000278270 648.06 1654.69 ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:10442]
85. MORF4L1 ENSG00000185787 634.40 1619.81 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
86. RPL3 ENSG00000100316 619.23 1581.08 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
87. NUCKS1 ENSG00000069275 613.16 1565.58 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
88. TUBA1A ENSG00000167552 573.69 1464.80 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
89. PBX1 ENSG00000185630 560.04 1429.95 PBX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8632]
90. TMEM258 ENSG00000134825 553.96 1414.43 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
91. RPLP1 ENSG00000137818 547.89 1398.93 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
92. PGAM1 ENSG00000171314 544.86 1391.19 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
93. RPS25 ENSG00000118181, ENSG00000280831 529.68 1352.43 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
94. MARCKS ENSG00000277443 520.57 1329.17 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
95. PKM ENSG00000067225 517.54 1321.44 pyruvate kinase M1/2 [Source:HGNC Symbol;Acc:HGNC:9021]
96. RPS19 ENSG00000105372 512.99 1309.82 ribosomal protein S19 [Source:HGNC Symbol;Acc:HGNC:10402]
97. HNRNPK ENSG00000165119 509.95 1302.06 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
98. RPL35A ENSG00000182899 506.92 1294.32 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
99. RPL6 ENSG00000089009 502.36 1282.68 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
100. RPL4 ENSG00000174444 500.84 1278.80 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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