Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s44.

Sample reads: 391,633. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 10161.56 25946.61 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. ACTB ENSG00000075624 4630.61 11823.84 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
3. EEF1A1 ENSG00000156508 4213.23 10758.10 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
4. RPS27 ENSG00000177954 3375.00 8617.75 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
5. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 3052.82 7795.10 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
6. PTMA ENSG00000187514 3012.19 7691.35 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
7. TUBA1B ENSG00000123416 2991.87 7639.47 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
8. RPS12 ENSG00000112306 2583.78 6597.45 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
9. PPIA ENSG00000196262 2562.88 6544.08 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
10. ACTG1 ENSG00000184009 2085.72 5325.69 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
11. RPL10A ENSG00000198755 2059.01 5257.49 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
12. MDK ENSG00000110492 2052.05 5239.72 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
13. RPS20 ENSG00000008988 2013.74 5141.90 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
14. RPL18A ENSG00000105640 2007.35 5125.58 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
15. HNRNPC ENSG00000092199 1934.21 4938.83 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
16. GNAS ENSG00000087460 1905.18 4864.70 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
17. RPL5 ENSG00000122406 1886.61 4817.29 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
18. RPL37 ENSG00000145592 1787.92 4565.29 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
19. HSP90AB1 ENSG00000096384 1772.83 4526.76 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
20. HIST1H4C ENSG00000197061 1715.36 4380.01 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
21. RPL15 ENSG00000174748 1613.78 4120.64 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
22. RPS6 ENSG00000137154 1583.59 4043.55 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
23. RPS23 ENSG00000186468 1581.27 4037.63 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
24. RPL31 ENSG00000071082 1423.95 3635.93 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
25. RPS5 ENSG00000083845 1402.48 3581.10 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
26. RPL35 ENSG00000136942 1375.77 3512.90 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
27. RPS2 ENSG00000140988 1356.04 3462.52 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
28. RPS11 ENSG00000142534 1273.02 3250.54 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
29. RPL10 ENSG00000147403 1240.52 3167.55 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
30. MTRNR2L1 ENSG00000256618 1216.72 3106.78 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
31. UBB ENSG00000170315 1200.46 3065.26 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
32. RPL7A ENSG00000148303, ENSG00000280858 1192.34 3044.53 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
33. RPLP0 ENSG00000089157 1170.28 2988.20 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
34. RPS15A ENSG00000134419 1154.02 2946.68 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
35. RPL34 ENSG00000109475 1149.96 2936.32 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
36. SFRP1 ENSG00000104332 1133.13 2893.34 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
37. RPL23 ENSG00000125691 1124.42 2871.10 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
38. MTRNR2L8 ENSG00000255823 1118.03 2854.79 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
39. TPT1 ENSG00000133112 1102.36 2814.78 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
40. RPL11 ENSG00000142676 1093.65 2792.54 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
41. RPS28 ENSG00000233927 1092.49 2789.57 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
42. RPL13 ENSG00000167526 1064.63 2718.44 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
43. RPS16 ENSG00000105193 1039.09 2653.22 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
44. PFN1 ENSG00000108518 999.61 2552.41 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
45. UBA52 ENSG00000221983 983.94 2512.40 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
46. HNRNPD ENSG00000138668 945.63 2414.58 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
47. IFITM2 ENSG00000185201 942.14 2405.67 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
48. TMSB4X ENSG00000205542 935.18 2387.90 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
49. RPS8 ENSG00000142937 928.21 2370.10 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
50. RPS27A ENSG00000143947 917.76 2343.42 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
51. SERF2 ENSG00000140264 914.28 2334.53 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
52. RPL13AP20 ENSG00000234498 906.15 2313.77 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
53. HMGN1 ENSG00000205581 899.77 2297.48 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
54. HMGB1 ENSG00000189403 895.70 2287.09 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
55. NPM1 ENSG00000181163 869.58 2220.39 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
56. RPS13 ENSG00000110700 860.29 2196.67 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
57. GAPDH ENSG00000111640 855.65 2184.82 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
58. H2AFZ ENSG00000164032 831.27 2122.57 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
59. MYL6 ENSG00000092841 824.30 2104.77 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
60. NGFRAP1 NGFRAP1 820.24 2094.41
61. RPS3A ENSG00000145425 788.89 2014.36 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
62. STMN1 ENSG00000117632 761.61 1944.70 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
63. EIF4G2 ENSG00000110321 752.32 1920.98 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
64. RPL3 ENSG00000100316 747.68 1909.13 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
65. NNAT ENSG00000053438 732.58 1870.58 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
66. PEG10 ENSG00000242265 730.26 1864.65 paternally expressed 10 [Source:HGNC Symbol;Acc:HGNC:14005]
67. VIM ENSG00000026025 725.04 1851.32 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
68. CAPNS1 ENSG00000126247 718.07 1833.53 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
69. RPL30 ENSG00000156482 684.40 1747.55 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
70. RPL22 ENSG00000116251 673.95 1720.87 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
71. RPS29 ENSG00000213741 673.37 1719.39 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
72. SRP14 ENSG00000140319 661.18 1688.26 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
73. TOMM6 ENSG00000214736 658.28 1680.86 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
74. RPS14 ENSG00000164587 653.06 1667.53 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
75. HMGA2 ENSG00000149948 651.32 1663.09 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
76. NUCKS1 ENSG00000069275 646.09 1649.73 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
77. FAU ENSG00000149806 642.03 1639.36 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
78. RPL32 ENSG00000144713 641.45 1637.88 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
79. RPL4 ENSG00000174444 641.45 1637.88 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
80. COX7A2 ENSG00000112695 621.71 1587.48 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
81. MARCKSL1 ENSG00000175130 607.20 1550.43 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
82. RPLP1 ENSG00000137818 602.55 1538.56 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
83. RPL27A ENSG00000166441 590.36 1507.43 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
84. IFITM3 ENSG00000142089 589.78 1505.95 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
85. HBE1 ENSG00000213931 564.24 1440.74 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
86. RPL26 ENSG00000161970 552.05 1409.61 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
87. COL3A1 ENSG00000168542 551.47 1408.13 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
88. RPL9 ENSG00000163682 550.31 1405.17 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
89. PCBP1 ENSG00000169564 549.15 1402.20 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
90. SRSF2 ENSG00000161547 543.92 1388.85 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
91. PBX1 ENSG00000185630 542.76 1385.89 PBX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8632]
92. PGAM1 ENSG00000171314 541.60 1382.93 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
93. CFL1 ENSG00000172757 539.28 1377.00 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
94. RPL6 ENSG00000089009 534.64 1365.15 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
95. RPS19 ENSG00000105372 526.51 1344.40 ribosomal protein S19 [Source:HGNC Symbol;Acc:HGNC:10402]
96. HNRNPK ENSG00000165119 522.45 1334.03 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
97. RPS15 ENSG00000115268 518.38 1323.64 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
98. PXDN ENSG00000130508 514.32 1313.27 peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966]
99. ITM2C ENSG00000135916 509.67 1301.40 integral membrane protein 2C [Source:HGNC Symbol;Acc:HGNC:6175]
100. RPL39 ENSG00000198918 507.93 1296.95 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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