Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s42.

Sample reads: 391,642. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 12362.20 31565.06 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. EEF1A1 ENSG00000156508 4378.87 11180.80 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. ACTB ENSG00000075624 3125.06 7979.38 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
4. RPS27 ENSG00000177954 3122.95 7973.99 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
5. TUBA1B ENSG00000123416 3111.89 7945.75 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
6. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2947.52 7526.06 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
7. PTMA ENSG00000187514 2721.52 6949.00 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
8. RPS12 ENSG00000112306 2556.10 6526.63 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
9. HIST1H4C ENSG00000197061 2184.17 5576.96 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
10. RPS23 ENSG00000186468 2177.32 5559.47 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
11. PPIA ENSG00000196262 2103.56 5371.13 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
12. GNAS ENSG00000087460 1974.50 5041.60 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
13. HSP90AB1 ENSG00000096384 1881.78 4804.85 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
14. RPL5 ENSG00000122406 1840.16 4698.58 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
15. ACTG1 ENSG00000184009 1810.66 4623.25 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
16. RPL10A ENSG00000198755 1762.19 4499.49 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
17. RPL37 ENSG00000145592 1756.92 4486.04 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
18. RPL31 ENSG00000071082 1744.81 4455.12 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
19. RPL18A ENSG00000105640 1704.77 4352.88 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
20. RPL15 ENSG00000174748 1645.24 4200.88 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
21. RPL23 ENSG00000125691 1612.58 4117.49 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
22. RPS6 ENSG00000137154 1580.97 4036.77 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
23. HNRNPC ENSG00000092199 1551.99 3962.78 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
24. ACTC1 ENSG00000159251 1535.13 3919.73 actin, alpha, cardiac muscle 1 [Source:HGNC Symbol;Acc:HGNC:143]
25. RPS2 ENSG00000140988 1533.55 3915.69 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
26. RPS20 ENSG00000008988 1481.40 3782.54 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
27. RPL34 ENSG00000109475 1404.48 3586.13 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
28. RPL7A ENSG00000148303, ENSG00000280858 1360.76 3474.50 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
29. MDK ENSG00000110492 1330.73 3397.82 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
30. RPL35 ENSG00000136942 1313.87 3354.77 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
31. NNAT ENSG00000053438 1285.95 3283.48 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
32. UBB ENSG00000170315 1201.13 3066.91 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
33. TPT1 ENSG00000133112 1123.17 2867.85 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
34. RPL10 ENSG00000147403 1122.64 2866.50 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
35. HNRNPD ENSG00000138668 1114.21 2844.97 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
36. RPL13AP20 ENSG00000234498 1072.59 2738.70 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
37. RPL11 ENSG00000142676 1064.69 2718.53 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
38. RPS15A ENSG00000134419 1064.69 2718.53 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
39. RPL13 ENSG00000167526 1026.76 2621.68 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
40. RPS5 ENSG00000083845 993.57 2536.94 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
41. MTRNR2L8 ENSG00000255823 969.34 2475.07 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
42. RPS16 ENSG00000105193 959.33 2449.51 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
43. RPLP0 ENSG00000089157 958.27 2446.80 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
44. HMGB1 ENSG00000189403 948.79 2422.60 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
45. RPS13 ENSG00000110700 919.82 2348.63 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
46. NPM1 ENSG00000181163 910.86 2325.75 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
47. RPS28 ENSG00000233927 895.06 2285.40 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
48. RPS27A ENSG00000143947 887.68 2266.56 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
49. RPS8 ENSG00000142937 859.76 2195.27 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
50. IFITM2 ENSG00000185201 850.28 2171.07 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
51. PFN1 ENSG00000108518 846.06 2160.29 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
52. RPS3A ENSG00000145425 841.85 2149.54 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
53. MTRNR2L1 ENSG00000256618 833.95 2129.37 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
54. RPS11 ENSG00000142534 815.51 2082.28 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
55. TMSB4X ENSG00000205542 784.95 2004.25 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
56. HMGA2 ENSG00000149948 779.68 1990.80 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
57. NGFRAP1 NGFRAP1 778.10 1986.76
58. HMGN1 ENSG00000205581 777.58 1985.44 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
59. GAPDH ENSG00000111640 768.09 1961.20 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
60. EIF4G2 ENSG00000110321 755.98 1930.28 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
61. VIM ENSG00000026025 733.32 1872.42 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
62. RPS14 ENSG00000164587 721.73 1842.83 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
63. COX7A2 ENSG00000112695 712.78 1819.98 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
64. MYL6 ENSG00000092841 704.88 1799.81 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
65. RPL32 ENSG00000144713 703.82 1797.10 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
66. H2AFZ ENSG00000164032 703.30 1795.77 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
67. MALAT1 ENSG00000251562 694.34 1772.90 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
68. RPL3 ENSG00000100316 691.18 1764.83 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
69. STMN1 ENSG00000117632 685.91 1751.37 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
70. PBX1 ENSG00000185630 684.86 1748.69 PBX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8632]
71. RPL9 ENSG00000163682 676.43 1727.16 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
72. SERF2 ENSG00000140264 670.63 1712.36 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
73. RPS29 ENSG00000213741 659.57 1684.12 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
74. CAPNS1 ENSG00000126247 657.46 1678.73 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
75. UBA52 ENSG00000221983 642.19 1639.74 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
76. RPL30 ENSG00000156482 629.01 1606.08 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
77. SOX4 ENSG00000124766 625.85 1598.02 SRY-box 4 [Source:HGNC Symbol;Acc:HGNC:11200]
78. CFL1 ENSG00000172757 625.33 1596.69 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
79. SRP14 ENSG00000140319 613.74 1567.09 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
80. RPL22 ENSG00000116251 607.94 1552.29 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
81. SRSF2 ENSG00000161547 591.08 1509.24 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
82. TOMM6 ENSG00000214736 585.82 1495.81 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
83. RPL4 ENSG00000174444 564.74 1441.98 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
84. RPS9 ENSG00000170889, ENSG00000274646, ENSG00000274950, ENSG00000278270 564.22 1440.65 ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:10442]
85. PEG10 ENSG00000242265 558.95 1427.20 paternally expressed 10 [Source:HGNC Symbol;Acc:HGNC:14005]
86. RPL6 ENSG00000089009 558.95 1427.20 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
87. NUCKS1 ENSG00000069275 552.10 1409.71 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
88. PCBP1 ENSG00000169564 532.08 1358.59 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
89. RPL26 ENSG00000161970 526.29 1343.80 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
90. MARCKSL1 ENSG00000175130 515.22 1315.54 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
91. FAU ENSG00000149806 512.06 1307.47 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
92. MTRNR2L2 ENSG00000271043 509.43 1300.75 MT-RNR2 like 2 [Source:HGNC Symbol;Acc:HGNC:37156]
93. RPL27A ENSG00000166441 507.85 1296.72 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
94. SEPW1 507.32 1295.37 selenoprotein W, 1
95. HNRNPK ENSG00000165119 504.16 1287.30 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
96. RPS7 ENSG00000171863 498.89 1273.84 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
97. TMEM258 ENSG00000134825 495.20 1264.42 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
98. RPLP1 ENSG00000137818 492.57 1257.71 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
99. RPS25 ENSG00000118181, ENSG00000280831 492.57 1257.71 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
100. SFRP1 ENSG00000104332 492.57 1257.71 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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