Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s40.

Sample reads: 391,634. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 15271.59 38994.50 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. EEF1A1 ENSG00000156508 3954.58 10097.63 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. TUBA1B ENSG00000123416 3469.19 8858.24 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
4. ACTB ENSG00000075624 3228.52 8243.71 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
5. HIST1H4C ENSG00000197061 2927.85 7475.98 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
6. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2873.91 7338.25 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
7. RPS27 ENSG00000177954 2851.67 7281.46 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
8. PPIA ENSG00000196262 2704.70 6906.19 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
9. PTMA ENSG00000187514 2629.87 6715.11 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
10. RPS12 ENSG00000112306 2595.49 6627.33 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
11. ACTC1 ENSG00000159251 2282.68 5828.60 actin, alpha, cardiac muscle 1 [Source:HGNC Symbol;Acc:HGNC:143]
12. GNAS ENSG00000087460 2125.60 5427.51 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
13. RPL31 ENSG00000071082 1930.10 4928.32 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
14. RPS2 ENSG00000140988 1919.99 4902.51 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
15. RPL15 ENSG00000174748 1837.07 4690.78 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
16. ACTG1 ENSG00000184009 1763.58 4503.13 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
17. RPS23 ENSG00000186468 1760.21 4494.52 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
18. RPL5 ENSG00000122406 1705.61 4355.11 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
19. HNRNPC ENSG00000092199 1700.21 4341.32 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
20. MTRNR2L8 ENSG00000255823 1663.81 4248.38 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
21. RPL37 ENSG00000145592 1574.82 4021.15 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
22. RPS20 ENSG00000008988 1526.96 3898.94 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
23. RPL18A ENSG00000105640 1514.15 3866.23 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
24. MDK ENSG00000110492 1507.41 3849.02 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
25. RPS6 ENSG00000137154 1489.20 3802.53 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
26. MTRNR2L2 ENSG00000271043 1483.14 3787.05 MT-RNR2 like 2 [Source:HGNC Symbol;Acc:HGNC:37156]
27. RPL10A ENSG00000198755 1392.13 3554.67 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
28. RPL13AP20 ENSG00000234498 1385.38 3537.43 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
29. HSP90AB1 ENSG00000096384 1347.63 3441.04 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
30. RPL34 ENSG00000109475 1332.80 3403.17 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
31. RPL35 ENSG00000136942 1292.35 3299.89 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
32. RPL7A ENSG00000148303, ENSG00000280858 1282.24 3274.07 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
33. RPL10 ENSG00000147403 1280.22 3268.92 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
34. RPS15A ENSG00000134419 1237.74 3160.45 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
35. RPLP0 ENSG00000089157 1202.01 3069.21 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
36. RPL11 ENSG00000142676 1170.33 2988.32 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
37. RPL13 ENSG00000167526 1125.84 2874.72 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
38. NPM1 ENSG00000181163 1117.75 2854.06 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
39. RPS16 ENSG00000105193 1099.54 2807.57 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
40. TPT1 ENSG00000133112 1097.52 2802.41 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
41. UBB ENSG00000170315 1089.43 2781.75 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
42. RPL23 ENSG00000125691 1084.04 2767.99 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
43. RPS11 ENSG00000142534 1073.93 2742.17 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
44. H2AFZ ENSG00000164032 1040.22 2656.10 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
45. MTRNR2L1 ENSG00000256618 1007.18 2571.74 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
46. GAPDH ENSG00000111640 1005.84 2568.31 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
47. RPS5 ENSG00000083845 998.42 2549.37 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
48. NNAT ENSG00000053438 976.17 2492.55 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
49. RPS28 ENSG00000233927 976.17 2492.55 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
50. PEG10 ENSG00000242265 957.30 2444.37 paternally expressed 10 [Source:HGNC Symbol;Acc:HGNC:14005]
51. HMGB1 ENSG00000189403 953.93 2435.77 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
52. RPS13 ENSG00000110700 935.05 2387.56 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
53. EIF4G2 ENSG00000110321 903.36 2306.64 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
54. RPS27A ENSG00000143947 856.85 2187.88 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
55. IFITM2 ENSG00000185201 848.76 2167.23 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
56. SRP14 ENSG00000140319 840.67 2146.57 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
57. PBX1 ENSG00000185630 828.53 2115.57 PBX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8632]
58. RPS8 ENSG00000142937 827.19 2112.15 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
59. HNRNPD ENSG00000138668 809.66 2067.39 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
60. HMGN1 ENSG00000205581 804.94 2055.34 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
61. NGFRAP1 NGFRAP1 800.89 2044.99
62. RPS29 ENSG00000213741 800.89 2044.99 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
63. RPS14 ENSG00000164587 793.48 2026.07 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
64. PFN1 ENSG00000108518 779.32 1989.92 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
65. UBA52 ENSG00000221983 738.20 1884.92 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
66. SERF2 ENSG00000140264 726.74 1855.66 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
67. RPS3A ENSG00000145425 702.47 1793.69 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
68. RPL4 ENSG00000174444 682.24 1742.03 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
69. TOMM6 ENSG00000214736 680.89 1738.59 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
70. STMN1 ENSG00000117632 678.87 1733.43 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
71. RPL32 ENSG00000144713 676.85 1728.27 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
72. MYL6 ENSG00000092841 667.41 1704.17 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
73. RPL6 ENSG00000089009 664.71 1697.27 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
74. VIM ENSG00000026025 657.97 1680.06 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
75. COX7A2 ENSG00000112695 628.31 1604.33 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
76. CAPNS1 ENSG00000126247 622.24 1588.83 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
77. SRSF2 ENSG00000161547 609.43 1556.12 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
78. RPL26 ENSG00000161970 608.09 1552.70 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
79. HMGA2 ENSG00000149948 600.00 1532.04 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
80. RPL30 ENSG00000156482 589.21 1504.49 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
81. RPL3 ENSG00000100316 588.54 1502.78 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
82. RPS25 ENSG00000118181, ENSG00000280831 588.54 1502.78 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
83. RPL9 ENSG00000163682 577.75 1475.23 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
84. RPL27A ENSG00000166441 577.07 1473.49 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
85. NUCKS1 ENSG00000069275 569.66 1454.57 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
86. HBE1 ENSG00000213931 568.99 1452.86 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
87. MORF4L1 ENSG00000185787 555.50 1418.41 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
88. PCBP1 ENSG00000169564 555.50 1418.41 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
89. RPS19 ENSG00000105372 540.00 1378.84 ribosomal protein S19 [Source:HGNC Symbol;Acc:HGNC:10402]
90. RPL22 ENSG00000116251 531.91 1358.18 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
91. SFRP1 ENSG00000104332 521.79 1332.34 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
92. TMSB4X ENSG00000205542 518.42 1323.73 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
93. FAU ENSG00000149806 513.03 1309.97 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
94. CFL1 ENSG00000172757 504.27 1287.60 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
95. TPM1 ENSG00000140416 501.57 1280.71 tropomyosin 1 [Source:HGNC Symbol;Acc:HGNC:12010]
96. HNRNPK ENSG00000165119 491.46 1254.89 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
97. RPS9 ENSG00000170889, ENSG00000274646, ENSG00000274950, ENSG00000278270 491.46 1254.89 ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:10442]
98. RPS7 ENSG00000171863 489.43 1249.71 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
99. SOX4 ENSG00000124766 488.76 1248.00 SRY-box 4 [Source:HGNC Symbol;Acc:HGNC:11200]
100. PGAM1 ENSG00000171314 486.74 1242.84 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA