Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s4.

Sample reads: 391,645. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 18470.42 47161.16 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. HIST1H4C ENSG00000197061 8244.46 21050.86 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
3. RPS27 ENSG00000177954 8135.09 20771.61 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
4. TUBA1B ENSG00000123416 4416.56 11276.96 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
5. EEF1A1 ENSG00000156508 4020.90 10266.70 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
6. RPS12 ENSG00000112306 3136.30 8008.02 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
7. RPL18A ENSG00000105640 2924.00 7465.95 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
8. PTMA ENSG00000187514 2531.56 6463.92 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
9. RPS2 ENSG00000140988 2412.54 6160.02 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
10. PPIA ENSG00000196262 2354.64 6012.18 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
11. MTRNR2L8 ENSG00000255823 2351.42 6003.96 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
12. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2232.41 5700.09 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
13. ACTB ENSG00000075624 2229.19 5691.87 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
14. RPL15 ENSG00000174748 2171.29 5544.03 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
15. RPS20 ENSG00000008988 2148.77 5486.53 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
16. RPL31 ENSG00000071082 2116.60 5404.39 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
17. RPS23 ENSG00000186468 2045.84 5223.71 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
18. RPS15A ENSG00000134419 1952.55 4985.51 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
19. HNRNPC ENSG00000092199 1939.68 4952.65 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
20. RPL37 ENSG00000145592 1930.03 4928.01 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
21. RPL10A ENSG00000198755 1872.13 4780.17 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
22. RPL5 ENSG00000122406 1843.18 4706.26 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
23. RPL34 ENSG00000109475 1807.80 4615.92 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
24. RPL13AP20 ENSG00000234498 1804.58 4607.70 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
25. RPS6 ENSG00000137154 1772.41 4525.56 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
26. ACTG1 ENSG00000184009 1692.00 4320.24 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
27. RPLP0 ENSG00000089157 1666.26 4254.52 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
28. RPS29 ENSG00000213741 1663.05 4246.32 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
29. RPL7A ENSG00000148303, ENSG00000280858 1598.71 4082.04 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
30. RPS16 ENSG00000105193 1598.71 4082.04 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
31. RPL10 ENSG00000147403 1592.28 4065.62 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
32. H2AFZ ENSG00000164032 1585.84 4049.18 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
33. RPS11 ENSG00000142534 1457.18 3720.67 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
34. CKB ENSG00000166165 1405.71 3589.25 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
35. RPS5 ENSG00000083845 1399.27 3572.80 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
36. RPL13 ENSG00000167526 1370.32 3498.89 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
37. RPL35 ENSG00000136942 1338.16 3416.77 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
38. TPT1 ENSG00000133112 1331.72 3400.33 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
39. RPS13 ENSG00000110700 1267.39 3236.07 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
40. TUBA1A ENSG00000167552 1264.17 3227.85 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
41. GNAS ENSG00000087460 1199.84 3063.59 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
42. MTRNR2L1 ENSG00000256618 1190.19 3038.95 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
43. GAPDH ENSG00000111640 1135.50 2899.31 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
44. RPL11 ENSG00000142676 1129.07 2882.89 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
45. MDK ENSG00000110492 1074.39 2743.28 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
46. RPS8 ENSG00000142937 1061.52 2710.42 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
47. RPL23 ENSG00000125691 1051.87 2685.78 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
48. RPL30 ENSG00000156482 1042.22 2661.14 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
49. RPS27A ENSG00000143947 1039.00 2652.91 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
50. RPS3A ENSG00000145425 1032.57 2636.50 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
51. HSP90AB1 ENSG00000096384 1029.35 2628.27 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
52. COX7A2 ENSG00000112695 1026.13 2620.05 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
53. RPS28 ENSG00000233927 965.02 2464.02 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
54. UBB ENSG00000170315 958.58 2447.58 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
55. HNRNPD ENSG00000138668 942.50 2406.52 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
56. PGAM1 ENSG00000171314 868.52 2217.62 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
57. SOX2 ENSG00000181449 868.52 2217.62 SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
58. MTRNR2L2 ENSG00000271043 852.43 2176.54 MT-RNR2 like 2 [Source:HGNC Symbol;Acc:HGNC:37156]
59. RPS14 ENSG00000164587 849.21 2168.32 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
60. MYL6 ENSG00000092841 833.13 2127.26 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
61. RPL9 ENSG00000163682 829.91 2119.04 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
62. RPS9 ENSG00000170889, ENSG00000274646, ENSG00000274950, ENSG00000278270 813.83 2077.98 ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:10442]
63. RPL22 ENSG00000116251 775.23 1979.42 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
64. RPS7 ENSG00000171863 775.23 1979.42 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
65. STMN1 ENSG00000117632 772.01 1971.20 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
66. SERF2 ENSG00000140264 768.80 1963.00 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
67. RPL26 ENSG00000161970 739.85 1889.08 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
68. NPM1 ENSG00000181163 726.98 1856.22 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
69. RPL32 ENSG00000144713 726.98 1856.22 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
70. TMSB4X ENSG00000205542 720.55 1839.81 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
71. VIM ENSG00000026025 714.11 1823.36 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
72. RPL3 ENSG00000100316 698.03 1782.30 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
73. SRP14 ENSG00000140319 694.81 1774.08 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
74. RPL4 ENSG00000174444 685.16 1749.44 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
75. PFN1 ENSG00000108518 678.73 1733.02 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
76. FAU ENSG00000149806 675.51 1724.80 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
77. RPL35A ENSG00000182899 675.51 1724.80 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
78. UBA52 ENSG00000221983 675.51 1724.80 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
79. TUBB3 ENSG00000258947 665.86 1700.16 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
80. HMGB1 ENSG00000189403 652.99 1667.30 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
81. RPL39 ENSG00000198918 652.99 1667.30 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
82. NGFRAP1 NGFRAP1 643.34 1642.66
83. HBE1 ENSG00000213931 636.91 1626.24 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
84. EIF4G2 ENSG00000110321 633.69 1618.02 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
85. RPS19 ENSG00000105372 630.48 1609.83 ribosomal protein S19 [Source:HGNC Symbol;Acc:HGNC:10402]
86. RPL27A ENSG00000166441 620.83 1585.19 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
87. RPS25 ENSG00000118181, ENSG00000280831 617.61 1576.96 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
88. MARCKSL1 ENSG00000175130 614.39 1568.74 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
89. TOMM6 ENSG00000214736 611.18 1560.55 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
90. RPS15 ENSG00000115268 591.88 1511.27 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
91. NUCKS1 ENSG00000069275 582.23 1486.63 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
92. RPS21 ENSG00000171858 572.58 1461.99 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
93. RPLP1 ENSG00000137818 566.14 1445.54 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
94. TMEM258 ENSG00000134825 550.06 1404.49 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
95. YBX1 ENSG00000065978 543.63 1388.07 Y-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8014]
96. RPL6 ENSG00000089009 537.19 1371.63 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
97. MARCKS ENSG00000277443 527.54 1346.99 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
98. PCBP1 ENSG00000169564 527.54 1346.99 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
99. PCBP2 ENSG00000197111 521.11 1330.57 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
100. SRSF2 ENSG00000161547 517.89 1322.35 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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