Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s39.

Sample reads: 391,653. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 17431.52 44507.52 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. HIST1H4C ENSG00000197061 12498.20 31911.38 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
3. RPS27 ENSG00000177954 7042.69 17981.95 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
4. EEF1A1 ENSG00000156508 4445.48 11350.55 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
5. RPL31 ENSG00000071082 3847.71 9824.27 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
6. RPL34 ENSG00000109475 3785.88 9666.41 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
7. RPS12 ENSG00000112306 3669.07 9368.16 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
8. RPL37 ENSG00000145592 3253.38 8306.78 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
9. RPS23 ENSG00000186468 2676.22 6833.13 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
10. TUBA1B ENSG00000123416 2428.87 6201.58 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
11. PPIA ENSG00000196262 2353.29 6008.60 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
12. RPL15 ENSG00000174748 2270.84 5798.09 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
13. RPS15A ENSG00000134419 2205.56 5631.41 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
14. ACTB ENSG00000075624 2081.89 5315.64 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
15. RPL10A ENSG00000198755 2075.02 5298.10 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
16. RPL23 ENSG00000125691 2020.05 5157.75 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
17. COX7A2 ENSG00000112695 1978.82 5052.48 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
18. MTRNR2L1 ENSG00000256618 1971.95 5034.94 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
19. RPL5 ENSG00000122406 1947.91 4973.56 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
20. RPS29 ENSG00000213741 1941.03 4955.99 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
21. PTMA ENSG00000187514 1910.12 4877.07 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
22. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1899.81 4850.74 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
23. RPS20 ENSG00000008988 1831.10 4675.31 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
24. MTRNR2L8 ENSG00000255823 1693.68 4324.44 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
25. ACTG1 ENSG00000184009 1673.07 4271.81 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
26. RPL35 ENSG00000136942 1580.31 4034.97 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
27. RPS3A ENSG00000145425 1573.44 4017.43 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
28. HNRNPC ENSG00000092199 1552.83 3964.81 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
29. RPL13AP20 ENSG00000234498 1473.81 3763.05 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
30. RPS27A ENSG00000143947 1453.20 3710.42 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
31. TPT1 ENSG00000133112 1446.33 3692.88 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
32. RPL18A ENSG00000105640 1415.41 3613.94 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
33. H2AFZ ENSG00000164032 1350.14 3447.28 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
34. NPM1 ENSG00000181163 1322.65 3377.09 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
35. HMGB1 ENSG00000189403 1243.64 3175.36 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
36. RPL30 ENSG00000156482 1240.20 3166.58 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
37. RPS14 ENSG00000164587 1233.33 3149.03 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
38. RPL11 ENSG00000142676 1181.80 3017.46 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
39. GNAS ENSG00000087460 1150.88 2938.52 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
40. RPS6 ENSG00000137154 1147.44 2929.73 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
41. HBE1 ENSG00000213931 1099.35 2806.95 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
42. RPL10 ENSG00000147403 1099.35 2806.95 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
43. RPS13 ENSG00000110700 1099.35 2806.95 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
44. RPL9 ENSG00000163682 1085.61 2771.86 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
45. RPS5 ENSG00000083845 1058.12 2701.67 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
46. RPS28 ENSG00000233927 1010.03 2578.89 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
47. RPS16 ENSG00000105193 1006.59 2570.10 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
48. EIF4G2 ENSG00000110321 996.28 2543.78 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
49. RPL7A ENSG00000148303, ENSG00000280858 982.54 2508.70 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
50. UBB ENSG00000170315 958.49 2447.29 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
51. RPL32 ENSG00000144713 931.01 2377.13 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
52. RPLP0 ENSG00000089157 931.01 2377.13 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
53. TMEM258 ENSG00000134825 931.01 2377.13 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
54. RPL26 ENSG00000161970 927.57 2368.34 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
55. MDK ENSG00000110492 920.70 2350.80 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
56. RPS2 ENSG00000140988 913.83 2333.26 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
57. RPS8 ENSG00000142937 893.22 2280.64 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
58. NUCKS1 ENSG00000069275 831.38 2122.74 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
59. SRP14 ENSG00000140319 810.77 2070.12 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
60. MYL6 ENSG00000092841 797.03 2035.04 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
61. RPS11 ENSG00000142534 783.28 1999.93 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
62. MORF4L1 ENSG00000185787 769.54 1964.85 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
63. RPS25 ENSG00000118181, ENSG00000280831 766.11 1956.09 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
64. HMGA2 ENSG00000149948 759.24 1938.55 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
65. GAPDH ENSG00000111640 755.80 1929.77 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
66. RPS7 ENSG00000171863 735.19 1877.14 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
67. TOMM6 ENSG00000214736 735.19 1877.14 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
68. ACTC1 ENSG00000159251 707.70 1806.96 actin, alpha, cardiac muscle 1 [Source:HGNC Symbol;Acc:HGNC:143]
69. RPL13 ENSG00000167526 697.40 1780.66 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
70. TMSB4X ENSG00000205542 676.79 1728.03 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
71. HSP90AB1 ENSG00000096384 663.04 1692.93 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
72. RPL39 ENSG00000198918 645.87 1649.09 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
73. HMGN1 ENSG00000205581 642.43 1640.30 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
74. MALAT1 ENSG00000251562 628.69 1605.22 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
75. RPL7 ENSG00000147604 614.95 1570.14 ribosomal protein L7 [Source:HGNC Symbol;Acc:HGNC:10363]
76. RPL27A ENSG00000166441 597.77 1526.27 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
77. SERF2 ENSG00000140264 597.77 1526.27 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
78. HNRNPD ENSG00000138668 587.46 1499.95 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
79. PCBP1 ENSG00000169564 577.16 1473.65 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
80. RPL22 ENSG00000116251 577.16 1473.65 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
81. RPS9 ENSG00000170889, ENSG00000274646, ENSG00000274950, ENSG00000278270 573.72 1464.87 ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:10442]
82. SOX11 ENSG00000176887 570.29 1456.11 SRY-box 11 [Source:HGNC Symbol;Acc:HGNC:11191]
83. RPS24 ENSG00000138326 566.85 1447.33 ribosomal protein S24 [Source:HGNC Symbol;Acc:HGNC:10411]
84. HSP90AA1 ENSG00000080824 549.67 1403.46 heat shock protein 90 alpha family class A member 1 [Source:HGNC Symbol;Acc:HGNC:5253]
85. SOX4 ENSG00000124766 539.37 1377.16 SRY-box 4 [Source:HGNC Symbol;Acc:HGNC:11200]
86. MTRNR2L2 ENSG00000271043 535.93 1368.38 MT-RNR2 like 2 [Source:HGNC Symbol;Acc:HGNC:37156]
87. PBX1 ENSG00000185630 535.93 1368.38 PBX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8632]
88. HNRNPK ENSG00000165119 529.06 1350.84 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
89. TCEA1 ENSG00000187735 525.63 1342.08 transcription elongation factor A1 [Source:HGNC Symbol;Acc:HGNC:11612]
90. NGFRAP1 NGFRAP1 511.88 1306.97
91. RPL35A ENSG00000182899 508.45 1298.21 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
92. RPS4Y1 ENSG00000129824 508.45 1298.21 ribosomal protein S4 Y-linked 1 [Source:HGNC Symbol;Acc:HGNC:10425]
93. EEF1B2 ENSG00000114942, ENSG00000283391 498.14 1271.89 eukaryotic translation elongation factor 1 beta 2 [Source:HGNC Symbol;Acc:HGNC:3208]
94. SFRP1 ENSG00000104332 498.14 1271.89 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
95. CBX3 ENSG00000122565 491.27 1254.35 chromobox 3 [Source:HGNC Symbol;Acc:HGNC:1553]
96. FAU ENSG00000149806 491.27 1254.35 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
97. PGAM1 ENSG00000171314 487.84 1245.59 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
98. NNAT ENSG00000053438 484.40 1236.81 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
99. TPM1 ENSG00000140416 484.40 1236.81 tropomyosin 1 [Source:HGNC Symbol;Acc:HGNC:12010]
100. VIM ENSG00000026025 484.40 1236.81 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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