Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s37.

Sample reads: 391,650. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 11154.04 28479.64 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. HIST1H4C ENSG00000197061 9992.51 25513.90 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
3. RPS27 ENSG00000177954 5517.63 14088.18 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
4. EEF1A1 ENSG00000156508 5346.41 13651.00 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
5. TUBA1B ENSG00000123416 3476.86 8877.48 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
6. ACTB ENSG00000075624 3122.08 7971.61 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
7. RPS12 ENSG00000112306 2932.35 7487.18 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
8. PTMA ENSG00000187514 2741.08 6998.81 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
9. ACTC1 ENSG00000159251 2665.49 6805.80 actin, alpha, cardiac muscle 1 [Source:HGNC Symbol;Acc:HGNC:143]
10. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2620.76 6691.59 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
11. RPL31 ENSG00000071082 2236.67 5710.90 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
12. PPIA ENSG00000196262 2219.70 5667.57 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
13. ACTG1 ENSG00000184009 2179.60 5565.18 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
14. RPL18A ENSG00000105640 2065.45 5273.72 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
15. RPL37 ENSG00000145592 2042.31 5214.64 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
16. RPL34 ENSG00000109475 2014.55 5143.76 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
17. RPL5 ENSG00000122406 1960.56 5005.90 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
18. RPL15 ENSG00000174748 1908.11 4871.98 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
19. RPL35 ENSG00000136942 1849.49 4722.31 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
20. MTRNR2L8 ENSG00000255823 1809.39 4619.92 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
21. GNAS ENSG00000087460 1670.56 4265.45 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
22. RPS20 ENSG00000008988 1661.31 4241.83 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
23. RPS6 ENSG00000137154 1644.34 4198.50 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
24. HNRNPC ENSG00000092199 1616.57 4127.59 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
25. RPL10A ENSG00000198755 1564.13 3993.70 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
26. HSP90AB1 ENSG00000096384 1528.65 3903.11 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
27. RPS15A ENSG00000134419 1524.02 3891.28 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
28. RPS29 ENSG00000213741 1440.72 3678.59 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
29. RPS5 ENSG00000083845 1431.47 3654.98 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
30. MDK ENSG00000110492 1429.93 3651.04 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
31. RPS23 ENSG00000186468 1400.62 3576.21 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
32. RPS2 ENSG00000140988 1395.99 3564.38 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
33. HBE1 ENSG00000213931 1385.19 3536.81 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
34. RPS16 ENSG00000105193 1363.60 3481.68 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
35. TPT1 ENSG00000133112 1325.03 3383.20 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
36. RPL23 ENSG00000125691 1318.86 3367.45 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
37. RPL10 ENSG00000147403 1304.98 3332.01 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
38. RPS3A ENSG00000145425 1300.35 3320.19 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
39. RPL13AP20 ENSG00000234498 1280.30 3268.99 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
40. RPL7A ENSG00000148303, ENSG00000280858 1186.21 3028.75 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
41. RPLP0 ENSG00000089157 1136.85 2902.72 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
42. RPS11 ENSG00000142534 1130.67 2886.94 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
43. RPS8 ENSG00000142937 1112.16 2839.68 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
44. MTRNR2L1 ENSG00000256618 1110.62 2835.75 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
45. RPL11 ENSG00000142676 1101.37 2812.13 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
46. COX7A2 ENSG00000112695 1042.75 2662.46 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
47. RPL13 ENSG00000167526 993.39 2536.43 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
48. RPL9 ENSG00000163682 991.85 2532.49 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
49. NPM1 ENSG00000181163 944.03 2410.39 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
50. RPS13 ENSG00000110700 940.94 2402.50 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
51. UBB ENSG00000170315 931.69 2378.89 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
52. PFN1 ENSG00000108518 919.35 2347.38 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
53. NNAT ENSG00000053438 907.01 2315.87 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
54. HMGB1 ENSG00000189403 903.92 2307.98 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
55. H2AFZ ENSG00000164032 891.58 2276.47 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
56. RPS27A ENSG00000143947 883.87 2256.79 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
57. RPS14 ENSG00000164587 832.97 2126.82 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
58. RPS28 ENSG00000233927 832.97 2126.82 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
59. RPL32 ENSG00000144713 814.46 2079.56 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
60. RPL30 ENSG00000156482 809.83 2067.74 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
61. SERF2 ENSG00000140264 808.29 2063.81 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
62. MYL6 ENSG00000092841 760.47 1941.71 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
63. RPL27A ENSG00000166441 741.96 1894.45 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
64. UBA52 ENSG00000221983 726.53 1855.05 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
65. EIF4G2 ENSG00000110321 709.56 1811.72 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
66. RPL22 ENSG00000116251 709.56 1811.72 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
67. GAPDH ENSG00000111640 703.39 1795.97 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
68. MTRNR2L2 ENSG00000271043 703.39 1795.97 MT-RNR2 like 2 [Source:HGNC Symbol;Acc:HGNC:37156]
69. STMN1 ENSG00000117632 700.31 1788.10 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
70. NGFRAP1 NGFRAP1 695.68 1776.28
71. HNRNPD ENSG00000138668 694.14 1772.35 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
72. PEG10 ENSG00000242265 694.14 1772.35 paternally expressed 10 [Source:HGNC Symbol;Acc:HGNC:14005]
73. RPL26 ENSG00000161970 692.60 1768.42 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
74. NUCKS1 ENSG00000069275 687.97 1756.60 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
75. PKM ENSG00000067225 687.97 1756.60 pyruvate kinase M1/2 [Source:HGNC Symbol;Acc:HGNC:9021]
76. MORF4L1 ENSG00000185787 671.00 1713.27 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
77. RPS7 ENSG00000171863 657.12 1677.83 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
78. HMGN1 ENSG00000205581 650.95 1662.07 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
79. RPL4 ENSG00000174444 650.95 1662.07 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
80. SRP14 ENSG00000140319 641.69 1638.43 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
81. FAU ENSG00000149806 640.15 1634.50 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
82. IFITM2 ENSG00000185201 635.52 1622.67 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
83. TMSB4X ENSG00000205542 620.10 1583.30 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
84. PGAM1 ENSG00000171314 609.30 1555.73 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
85. RPL3 ENSG00000100316 609.30 1555.73 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
86. TOMM6 ENSG00000214736 604.67 1543.91 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
87. CFL1 ENSG00000172757 596.96 1524.22 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
88. RPS9 ENSG00000170889, ENSG00000274646, ENSG00000274950, ENSG00000278270 558.40 1425.76 ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:10442]
89. RPLP1 ENSG00000137818 542.97 1386.37 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
90. HNRNPK ENSG00000165119 530.63 1354.86 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
91. SRSF2 ENSG00000161547 526.00 1343.04 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
92. RPL14 ENSG00000188846 521.38 1331.24 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
93. RPS25 ENSG00000118181, ENSG00000280831 516.75 1319.42 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
94. RPL39 ENSG00000198918 513.66 1311.53 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
95. CAPNS1 ENSG00000126247 512.12 1307.60 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
96. HMGA2 ENSG00000149948 510.58 1303.67 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
97. RPL35A ENSG00000182899 502.87 1283.98 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
98. RPS21 ENSG00000171858 502.87 1283.98 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
99. RPS15 ENSG00000115268 487.44 1244.58 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
100. RPL37A ENSG00000197756 481.27 1228.83 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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