Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s36.

Sample reads: 391,636. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 12030.38 30718.24 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. EEF1A1 ENSG00000156508 4040.43 10316.79 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. TUBA1B ENSG00000123416 3735.83 9539.03 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
4. RPS27 ENSG00000177954 3649.02 9317.37 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
5. ACTB ENSG00000075624 3325.42 8491.09 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
6. PTMA ENSG00000187514 3269.94 8349.43 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
7. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2750.64 7023.45 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
8. PPIA ENSG00000196262 2637.12 6733.59 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
9. HIST1H4C ENSG00000197061 2625.82 6704.74 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
10. RPS12 ENSG00000112306 2491.24 6361.10 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
11. GNAS ENSG00000087460 2170.20 5541.36 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
12. MDK ENSG00000110492 2107.02 5380.04 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
13. ACTG1 ENSG00000184009 2093.67 5345.95 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
14. RPL18A ENSG00000105640 2029.97 5183.30 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
15. RPL31 ENSG00000071082 1969.88 5029.87 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
16. RPS20 ENSG00000008988 1928.27 4923.62 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
17. RPL5 ENSG00000122406 1898.99 4848.86 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
18. RPS6 ENSG00000137154 1831.19 4675.74 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
19. RPL10A ENSG00000198755 1705.34 4354.40 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
20. RPL15 ENSG00000174748 1637.54 4181.28 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
21. RPS2 ENSG00000140988 1512.21 3861.26 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
22. HNRNPC ENSG00000092199 1470.60 3755.01 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
23. RPL7A ENSG00000148303, ENSG00000280858 1459.81 3727.46 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
24. HSP90AB1 ENSG00000096384 1414.61 3612.05 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
25. RPL37 ENSG00000145592 1399.20 3572.70 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
26. RPL35 ENSG00000136942 1326.78 3387.79 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
27. RPS15A ENSG00000134419 1312.91 3352.37 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
28. RPS16 ENSG00000105193 1309.83 3344.51 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
29. UBB ENSG00000170315 1308.29 3340.57 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
30. RPL13AP20 ENSG00000234498 1292.88 3301.23 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
31. RPS11 ENSG00000142534 1289.79 3293.34 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
32. RPS5 ENSG00000083845 1286.20 3284.17 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
33. ACTC1 ENSG00000159251 1258.97 3214.64 actin, alpha, cardiac muscle 1 [Source:HGNC Symbol;Acc:HGNC:143]
34. RPL11 ENSG00000142676 1236.37 3156.93 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
35. RPLP0 ENSG00000089157 1234.32 3151.70 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
36. RPL10 ENSG00000147403 1221.99 3120.22 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
37. RPL23 ENSG00000125691 1175.76 3002.17 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
38. RPL13 ENSG00000167526 1172.68 2994.31 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
39. MTRNR2L8 ENSG00000255823 1166.52 2978.58 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
40. GAPDH ENSG00000111640 1130.56 2886.76 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
41. RPS13 ENSG00000110700 1099.23 2806.76 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
42. RPL34 ENSG00000109475 1089.98 2783.14 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
43. RPS23 ENSG00000186468 1055.57 2695.28 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
44. TPT1 ENSG00000133112 1043.75 2665.10 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
45. IFITM2 ENSG00000185201 1039.13 2653.30 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
46. RPS28 ENSG00000233927 1036.56 2646.74 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
47. MTRNR2L1 ENSG00000256618 1028.34 2625.75 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
48. UBA52 ENSG00000221983 998.04 2548.38 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
49. HNRNPD ENSG00000138668 995.47 2541.82 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
50. RPS8 ENSG00000142937 973.89 2486.72 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
51. H2AFZ ENSG00000164032 942.05 2405.42 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
52. HMGB1 ENSG00000189403 926.64 2366.07 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
53. PFN1 ENSG00000108518 915.34 2337.22 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
54. RPS3A ENSG00000145425 888.11 2267.69 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
55. HBE1 ENSG00000213931 887.09 2265.09 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
56. NGFRAP1 NGFRAP1 883.49 2255.89
57. HMGN1 ENSG00000205581 882.46 2253.26 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
58. RPS27A ENSG00000143947 873.22 2229.67 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
59. NPM1 ENSG00000181163 864.49 2207.38 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
60. NNAT ENSG00000053438 833.67 2128.68 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
61. RPS29 ENSG00000213741 825.96 2109.00 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
62. SERF2 ENSG00000140264 784.36 2002.78 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
63. STMN1 ENSG00000117632 752.51 1921.45 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
64. MYL6 ENSG00000092841 749.94 1914.89 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
65. RPS14 ENSG00000164587 745.83 1904.39 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
66. CAPNS1 ENSG00000126247 709.87 1812.57 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
67. RPL3 ENSG00000100316 702.17 1792.91 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
68. PEG10 ENSG00000242265 701.66 1791.61 paternally expressed 10 [Source:HGNC Symbol;Acc:HGNC:14005]
69. RPL27A ENSG00000166441 688.81 1758.80 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
70. SRP14 ENSG00000140319 683.16 1744.37 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
71. SRSF2 ENSG00000161547 680.08 1736.51 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
72. RPL22 ENSG00000116251 658.51 1681.43 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
73. RPL26 ENSG00000161970 655.94 1674.87 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
74. COX7A2 ENSG00000112695 652.86 1667.01 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
75. RPL4 ENSG00000174444 648.24 1655.21 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
76. TOMM6 ENSG00000214736 642.59 1640.78 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
77. CFL1 ENSG00000172757 638.99 1631.59 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
78. RPS25 ENSG00000118181, ENSG00000280831 627.69 1602.74 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
79. NUCKS1 ENSG00000069275 623.58 1592.24 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
80. RPS15 ENSG00000115268 619.98 1583.05 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
81. RPL30 ENSG00000156482 591.73 1510.92 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
82. RPL32 ENSG00000144713 581.97 1486.00 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
83. PKM ENSG00000067225 579.41 1479.46 pyruvate kinase M1/2 [Source:HGNC Symbol;Acc:HGNC:9021]
84. RPL6 ENSG00000089009 564.51 1441.41 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
85. RPS7 ENSG00000171863 564.51 1441.41 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
86. TMEM258 ENSG00000134825 562.46 1436.18 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
87. MARCKSL1 ENSG00000175130 552.70 1411.26 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
88. RPLP1 ENSG00000137818 552.70 1411.26 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
89. TPM1 ENSG00000140416 550.64 1406.00 tropomyosin 1 [Source:HGNC Symbol;Acc:HGNC:12010]
90. FAU ENSG00000149806 547.56 1398.13 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
91. RPS19 ENSG00000105372 543.45 1387.64 ribosomal protein S19 [Source:HGNC Symbol;Acc:HGNC:10402]
92. RPS9 ENSG00000170889, ENSG00000274646, ENSG00000274950, ENSG00000278270 541.40 1382.40 ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:10442]
93. ATP5G2 531.12 1356.16 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
94. HNRNPA1 ENSG00000135486 527.53 1346.99 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
95. RPL14 ENSG00000188846 521.88 1332.56 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
96. PBX1 ENSG00000185630 518.28 1323.37 PBX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8632]
97. RPL39 ENSG00000198918 505.95 1291.89 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
98. RPL9 ENSG00000163682 495.68 1265.66 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
99. EIF4G2 ENSG00000110321 480.78 1227.62 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
100. SOX4 ENSG00000124766 474.11 1210.59 SRY-box 4 [Source:HGNC Symbol;Acc:HGNC:11200]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA