Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s35.

Sample reads: 391,649. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 12137.78 30991.51 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. HIST1H4C ENSG00000197061 7587.46 19373.14 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
3. RPS27 ENSG00000177954 5114.47 13058.83 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
4. EEF1A1 ENSG00000156508 4683.24 11957.76 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
5. TUBA1B ENSG00000123416 3811.51 9731.97 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
6. PTMA ENSG00000187514 3199.44 8169.16 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
7. RPS12 ENSG00000112306 3058.79 7810.04 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
8. RPL31 ENSG00000071082 2834.67 7237.79 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
9. ACTB ENSG00000075624 2765.12 7060.21 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
10. PPIA ENSG00000196262 2505.46 6397.22 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
11. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2352.44 6006.51 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
12. RPL37 ENSG00000145592 2250.43 5746.04 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
13. RPL34 ENSG00000109475 2179.33 5564.50 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
14. RPS23 ENSG00000186468 2173.15 5548.73 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
15. RPL15 ENSG00000174748 2166.96 5532.92 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
16. ACTG1 ENSG00000184009 2148.42 5485.58 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
17. GNAS ENSG00000087460 2047.95 5229.05 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
18. RPS20 ENSG00000008988 1893.39 4834.41 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
19. RPS15A ENSG00000134419 1836.20 4688.39 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
20. MDK ENSG00000110492 1765.10 4506.85 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
21. RPL10A ENSG00000198755 1720.28 4392.41 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
22. RPL35 ENSG00000136942 1707.91 4360.82 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
23. HNRNPC ENSG00000092199 1656.91 4230.60 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
24. RPL5 ENSG00000122406 1632.18 4167.46 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
25. RPS6 ENSG00000137154 1564.17 3993.81 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
26. RPL18A ENSG00000105640 1506.98 3847.79 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
27. RPL23 ENSG00000125691 1500.80 3832.01 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
28. HBE1 ENSG00000213931 1491.53 3808.34 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
29. HSP90AB1 ENSG00000096384 1347.78 3441.30 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
30. TPT1 ENSG00000133112 1327.69 3390.00 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
31. RPS2 ENSG00000140988 1287.50 3287.39 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
32. RPL11 ENSG00000142676 1284.41 3279.50 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
33. COX7A2 ENSG00000112695 1247.32 3184.79 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
34. RPS3A ENSG00000145425 1236.50 3157.17 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
35. RPS29 ENSG00000213741 1222.59 3121.65 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
36. RPS13 ENSG00000110700 1191.68 3042.73 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
37. RPL10 ENSG00000147403 1190.13 3038.77 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
38. RPS16 ENSG00000105193 1188.58 3034.81 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
39. RPL13AP20 ENSG00000234498 1177.76 3007.19 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
40. MTRNR2L1 ENSG00000256618 1166.95 2979.58 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
41. RPS5 ENSG00000083845 1154.58 2948.00 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
42. HMGB1 ENSG00000189403 1139.12 2908.53 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
43. RPLP0 ENSG00000089157 1115.94 2849.34 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
44. RPL7A ENSG00000148303, ENSG00000280858 1052.57 2687.54 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
45. UBB ENSG00000170315 1051.02 2683.58 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
46. MTRNR2L8 ENSG00000255823 1047.93 2675.69 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
47. RPS11 ENSG00000142534 1029.39 2628.35 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
48. RPS27A ENSG00000143947 1013.93 2588.88 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
49. RPL13 ENSG00000167526 1004.66 2565.21 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
50. HNRNPD ENSG00000138668 969.11 2474.44 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
51. NPM1 ENSG00000181163 953.65 2434.96 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
52. H2AFZ ENSG00000164032 939.74 2399.45 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
53. PFN1 ENSG00000108518 901.10 2300.79 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
54. RPS8 ENSG00000142937 896.46 2288.94 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
55. RPL30 ENSG00000156482 891.82 2277.09 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
56. RPS28 ENSG00000233927 876.37 2237.64 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
57. MYL6 ENSG00000092841 873.28 2229.75 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
58. STMN1 ENSG00000117632 854.73 2182.39 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
59. GAPDH ENSG00000111640 853.18 2178.43 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
60. RPL9 ENSG00000163682 848.55 2166.61 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
61. RPS14 ENSG00000164587 830.00 2119.25 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
62. NUCKS1 ENSG00000069275 828.45 2115.29 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
63. TOMM6 ENSG00000214736 806.82 2060.06 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
64. HBZ ENSG00000130656 797.54 2036.37 hemoglobin subunit zeta [Source:HGNC Symbol;Acc:HGNC:4835]
65. HMGN1 ENSG00000205581 772.81 1973.22 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
66. CFL1 ENSG00000172757 734.17 1874.56 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
67. SRP14 ENSG00000140319 732.63 1870.63 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
68. TMSB4X ENSG00000205542 729.53 1862.72 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
69. EIF4G2 ENSG00000110321 727.99 1858.78 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
70. HMGA2 ENSG00000149948 707.90 1807.49 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
71. RPL26 ENSG00000161970 706.35 1803.53 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
72. RPL32 ENSG00000144713 695.53 1775.90 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
73. SERF2 ENSG00000140264 681.62 1740.39 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
74. RPS9 ENSG00000170889, ENSG00000274646, ENSG00000274950, ENSG00000278270 675.44 1724.61 ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:10442]
75. RPL22 ENSG00000116251 666.16 1700.91 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
76. RPS7 ENSG00000171863 661.53 1689.09 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
77. UBA52 ENSG00000221983 650.71 1661.46 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
78. PGAM1 ENSG00000171314 641.43 1637.77 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
79. CAPNS1 ENSG00000126247 632.16 1614.10 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
80. TMEM258 ENSG00000134825 627.52 1602.25 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
81. NGFRAP1 NGFRAP1 612.07 1562.80
82. RPL27A ENSG00000166441 593.52 1515.44 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
83. RPS25 ENSG00000118181, ENSG00000280831 581.15 1483.86 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
84. NNAT ENSG00000053438 568.79 1452.30 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
85. RPL3 ENSG00000100316 565.70 1444.41 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
86. SRSF2 ENSG00000161547 562.61 1436.52 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
87. RPL4 ENSG00000174444 556.42 1420.71 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
88. PKM ENSG00000067225 554.88 1416.78 pyruvate kinase M1/2 [Source:HGNC Symbol;Acc:HGNC:9021]
89. RPL39 ENSG00000198918 553.33 1412.82 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
90. MALAT1 ENSG00000251562 547.15 1397.04 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
91. RPL35A ENSG00000182899 533.24 1361.53 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
92. PCBP1 ENSG00000169564 530.15 1353.64 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
93. MARCKSL1 ENSG00000175130 525.51 1341.79 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
94. EEF1B2 ENSG00000114942, ENSG00000283391 514.69 1314.16 eukaryotic translation elongation factor 1 beta 2 [Source:HGNC Symbol;Acc:HGNC:3208]
95. IFITM2 ENSG00000185201 502.33 1282.60 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
96. FAU ENSG00000149806 497.69 1270.76 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
97. HNRNPM ENSG00000099783 496.15 1266.82 heterogeneous nuclear ribonucleoprotein M [Source:HGNC Symbol;Acc:HGNC:5046]
98. RPL7 ENSG00000147604 491.51 1254.98 ribosomal protein L7 [Source:HGNC Symbol;Acc:HGNC:10363]
99. RPLP1 ENSG00000137818 488.42 1247.09 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
100. ATP5G2 485.33 1239.20 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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