Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s30.

Sample reads: 391,631. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 18257.58 46619.32 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. HIST1H4C ENSG00000197061 9980.98 25485.66 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
3. RPS27 ENSG00000177954 6919.94 17669.53 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
4. EEF1A1 ENSG00000156508 5333.54 13618.78 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
5. RPS12 ENSG00000112306 4122.78 10527.20 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
6. TUBA1B ENSG00000123416 3144.86 8030.16 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
7. PTMA ENSG00000187514 3042.41 7768.56 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
8. RPL15 ENSG00000174748 2949.28 7530.76 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
9. RPL31 ENSG00000071082 2769.22 7070.99 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
10. RPL34 ENSG00000109475 2756.80 7039.28 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
11. PPIA ENSG00000196262 2719.54 6944.13 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
12. RPL10A ENSG00000198755 2676.08 6833.16 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
13. RPL5 ENSG00000122406 2589.16 6611.22 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
14. RPL37 ENSG00000145592 2492.92 6365.48 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
15. ACTB ENSG00000075624 2477.39 6325.82 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
16. RPS20 ENSG00000008988 2461.87 6286.19 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
17. RPS6 ENSG00000137154 2393.57 6111.80 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
18. RPL18A ENSG00000105640 2378.05 6072.17 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
19. RPS15A ENSG00000134419 2210.41 5644.11 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
20. RPS23 ENSG00000186468 2166.94 5533.11 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
21. RPL35 ENSG00000136942 2148.32 5485.57 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
22. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2070.70 5287.37 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
23. RPL7A ENSG00000148303, ENSG00000280858 2024.14 5168.48 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
24. RPS3A ENSG00000145425 1872.02 4780.06 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
25. HNRNPC ENSG00000092199 1859.60 4748.34 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
26. RPS2 ENSG00000140988 1837.87 4692.86 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
27. RPS16 ENSG00000105193 1794.40 4581.86 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
28. RPL13AP20 ENSG00000234498 1738.52 4439.18 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
29. RPS11 ENSG00000142534 1701.27 4344.06 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
30. RPS29 ENSG00000213741 1673.33 4272.72 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
31. TPT1 ENSG00000133112 1636.07 4177.58 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
32. RPS27A ENSG00000143947 1617.45 4130.03 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
33. RPS5 ENSG00000083845 1617.45 4130.03 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
34. RPLP0 ENSG00000089157 1577.09 4026.98 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
35. RPL10 ENSG00000147403 1539.83 3931.84 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
36. ACTG1 ENSG00000184009 1518.10 3876.35 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
37. RPL23 ENSG00000125691 1515.00 3868.44 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
38. RPS13 ENSG00000110700 1483.95 3789.15 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
39. RPL11 ENSG00000142676 1446.70 3694.04 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
40. RPS8 ENSG00000142937 1431.18 3654.41 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
41. GNAS ENSG00000087460 1347.35 3440.35 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
42. RPL9 ENSG00000163682 1344.25 3432.44 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
43. RPL13 ENSG00000167526 1338.04 3416.58 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
44. UBB ENSG00000170315 1297.68 3313.53 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
45. MDK ENSG00000110492 1241.80 3170.84 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
46. COX7A2 ENSG00000112695 1226.28 3131.21 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
47. HMGB1 ENSG00000189403 1182.82 3020.24 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
48. RPS28 ENSG00000233927 1170.40 2988.53 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
49. H2AFZ ENSG00000164032 1133.14 2893.39 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
50. GAPDH ENSG00000111640 1117.62 2853.76 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
51. RPL30 ENSG00000156482 1095.89 2798.27 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
52. RPL32 ENSG00000144713 1089.68 2782.41 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
53. RPL26 ENSG00000161970 1055.53 2695.21 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
54. RPS7 ENSG00000171863 1043.11 2663.50 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
55. NPM1 ENSG00000181163 1012.07 2584.24 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
56. MTRNR2L8 ENSG00000255823 1008.96 2576.30 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
57. HSP90AB1 ENSG00000096384 962.40 2457.41 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
58. MYL6 ENSG00000092841 937.56 2393.99 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
59. RPL22 ENSG00000116251 928.25 2370.21 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
60. RPS9 ENSG00000170889, ENSG00000274646, ENSG00000274950, ENSG00000278270 918.93 2346.42 ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:10442]
61. RPS14 ENSG00000164587 909.62 2322.64 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
62. RPL35A ENSG00000182899 903.41 2306.79 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
63. RPL27A ENSG00000166441 875.47 2235.44 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
64. TMSB4X ENSG00000205542 819.59 2092.76 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
65. HMGN1 ENSG00000205581 813.38 2076.90 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
66. STMN1 ENSG00000117632 797.86 2037.27 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
67. PGAM1 ENSG00000171314 782.33 1997.62 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
68. SRP14 ENSG00000140319 782.33 1997.62 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
69. NGFRAP1 NGFRAP1 773.02 1973.85
70. SERF2 ENSG00000140264 773.02 1973.85 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
71. RPL3 ENSG00000100316 723.35 1847.02 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
72. TOMM6 ENSG00000214736 720.24 1839.08 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
73. MTRNR2L1 ENSG00000256618 710.93 1815.30 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
74. FAU ENSG00000149806 695.41 1775.68 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
75. HBE1 ENSG00000213931 689.20 1759.82 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
76. RPS19 ENSG00000105372 689.20 1759.82 ribosomal protein S19 [Source:HGNC Symbol;Acc:HGNC:10402]
77. RPL4 ENSG00000174444 676.78 1728.11 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
78. TMEM258 ENSG00000134825 673.68 1720.19 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
79. RPLP1 ENSG00000137818 661.26 1688.48 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
80. HMGA2 ENSG00000149948 658.15 1680.54 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
81. HNRNPD ENSG00000138668 658.15 1680.54 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
82. RPL39 ENSG00000198918 651.95 1664.70 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
83. EEF1B2 ENSG00000114942, ENSG00000283391 630.21 1609.19 eukaryotic translation elongation factor 1 beta 2 [Source:HGNC Symbol;Acc:HGNC:3208]
84. UBA52 ENSG00000221983 630.21 1609.19 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
85. ACTC1 ENSG00000159251 624.01 1593.36 actin, alpha, cardiac muscle 1 [Source:HGNC Symbol;Acc:HGNC:143]
86. PFN1 ENSG00000108518 624.01 1593.36 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
87. RPL19 ENSG00000108298 620.90 1585.42 ribosomal protein L19 [Source:HGNC Symbol;Acc:HGNC:10312]
88. RPL37A ENSG00000197756 614.69 1569.56 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
89. RPS15 ENSG00000115268 608.48 1553.71 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
90. TMA7 ENSG00000232112 596.06 1521.99 translation machinery associated 7 homolog [Source:HGNC Symbol;Acc:HGNC:26932]
91. RPL6 ENSG00000089009 589.86 1506.16 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
92. RPS21 ENSG00000171858 589.86 1506.16 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
93. CAPNS1 ENSG00000126247 583.65 1490.31 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
94. RPS25 ENSG00000118181, ENSG00000280831 574.33 1466.51 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
95. CFL1 ENSG00000172757 571.23 1458.59 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
96. DYNLL1 ENSG00000088986 571.23 1458.59 dynein light chain LC8-type 1 [Source:HGNC Symbol;Acc:HGNC:15476]
97. RPL14 ENSG00000188846 561.92 1434.82 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
98. EIF4G2 ENSG00000110321 552.60 1411.02 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
99. NNAT ENSG00000053438 546.39 1395.16 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
100. HINT1 ENSG00000169567 543.29 1387.25 histidine triad nucleotide binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4912]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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