Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s3.

Sample reads: 391,648. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 8599.55 21957.36 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. TUBA1B ENSG00000123416 5192.12 13257.12 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
3. EEF1A1 ENSG00000156508 4914.44 12548.11 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
4. RPS27 ENSG00000177954 4630.97 11824.33 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
5. ACTB ENSG00000075624 3074.78 7850.88 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
6. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2953.29 7540.68 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
7. PTMA ENSG00000187514 2666.93 6809.51 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
8. ACTG1 ENSG00000184009 2426.85 6196.51 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
9. PPIA ENSG00000196262 2409.49 6152.19 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
10. RPS12 ENSG00000112306 2276.44 5812.47 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
11. HIST1H4C ENSG00000197061 2186.77 5583.51 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
12. RPL5 ENSG00000122406 2172.30 5546.57 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
13. RPS6 ENSG00000137154 2082.63 5317.61 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
14. GNAS ENSG00000087460 1810.74 4623.39 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
15. HSP90AB1 ENSG00000096384 1767.35 4512.60 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
16. RPL10A ENSG00000198755 1744.21 4453.52 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
17. TUBA1A ENSG00000167552 1723.96 4401.81 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
18. MTRNR2L8 ENSG00000255823 1680.57 4291.02 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
19. RPS20 ENSG00000008988 1669.00 4261.48 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
20. RPL18A ENSG00000105640 1585.12 4047.31 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
21. RPS23 ENSG00000186468 1561.98 3988.23 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
22. RPL10 ENSG00000147403 1504.13 3840.52 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
23. HNRNPC ENSG00000092199 1466.52 3744.49 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
24. RPL31 ENSG00000071082 1434.70 3663.24 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
25. RPLP0 ENSG00000089157 1428.92 3648.48 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
26. CKB ENSG00000166165 1399.99 3574.62 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
27. RPS2 ENSG00000140988 1371.07 3500.77 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
28. MTRNR2L1 ENSG00000256618 1336.36 3412.15 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
29. UBB ENSG00000170315 1269.83 3242.28 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
30. RPS16 ENSG00000105193 1249.58 3190.57 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
31. RPL15 ENSG00000174748 1200.41 3065.02 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
32. RPL13 ENSG00000167526 1171.48 2991.16 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
33. MDK ENSG00000110492 1157.02 2954.24 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
34. RPL7A ENSG00000148303, ENSG00000280858 1157.02 2954.24 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
35. RPL13AP20 ENSG00000234498 1093.38 2791.74 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
36. RPL37 ENSG00000145592 1070.24 2732.66 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
37. RPS13 ENSG00000110700 1052.89 2688.36 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
38. HNRNPD ENSG00000138668 1044.21 2666.20 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
39. RPS5 ENSG00000083845 1041.32 2658.82 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
40. RPS11 ENSG00000142534 1035.53 2644.03 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
41. RPS15A ENSG00000134419 1018.18 2599.73 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
42. RPL34 ENSG00000109475 969.00 2474.16 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
43. VIM ENSG00000026025 969.00 2474.16 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
44. RPL11 ENSG00000142676 960.33 2452.03 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
45. TPT1 ENSG00000133112 960.33 2452.03 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
46. GAPDH ENSG00000111640 957.43 2444.62 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
47. STMN1 ENSG00000117632 954.54 2437.24 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
48. RPS27A ENSG00000143947 951.65 2429.86 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
49. RPS8 ENSG00000142937 911.15 2326.45 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
50. RPL35 ENSG00000136942 864.87 2208.29 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
51. RPL23 ENSG00000125691 844.62 2156.58 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
52. RPS28 ENSG00000233927 804.13 2053.20 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
53. RPS3A ENSG00000145425 801.24 2045.82 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
54. SERF2 ENSG00000140264 801.24 2045.82 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
55. SOX2 ENSG00000181449 763.63 1949.79 SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
56. PKM ENSG00000067225 734.71 1875.95 pyruvate kinase M1/2 [Source:HGNC Symbol;Acc:HGNC:9021]
57. HMGB1 ENSG00000189403 728.92 1861.16 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
58. PFN1 ENSG00000108518 728.92 1861.16 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
59. SRSF2 ENSG00000161547 726.03 1853.78 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
60. RPS29 ENSG00000213741 714.46 1824.24 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
61. RPL4 ENSG00000174444 702.89 1794.70 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
62. TMSB4X ENSG00000205542 691.32 1765.16 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
63. MAP1B ENSG00000131711 679.75 1735.62 microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
64. TUBB3 ENSG00000258947 676.86 1728.24 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
65. ZIC1 ENSG00000152977 671.07 1713.45 Zic family member 1 [Source:HGNC Symbol;Acc:HGNC:12872]
66. MARCKSL1 ENSG00000175130 662.39 1691.29 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
67. RPL3 ENSG00000100316 659.50 1683.91 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
68. EIF4G2 ENSG00000110321 653.72 1669.15 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
69. RPL6 ENSG00000089009 650.82 1661.75 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
70. UBA52 ENSG00000221983 650.82 1661.75 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
71. H2AFZ ENSG00000164032 647.93 1654.37 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
72. COX7A2 ENSG00000112695 645.04 1646.99 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
73. NPM1 ENSG00000181163 630.58 1610.07 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
74. PCBP1 ENSG00000169564 630.58 1610.07 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
75. RPL22 ENSG00000116251 630.58 1610.07 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
76. NNAT ENSG00000053438 619.01 1580.53 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
77. MALAT1 ENSG00000251562 613.22 1565.74 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
78. PGAM1 ENSG00000171314 607.44 1550.99 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
79. RPLP1 ENSG00000137818 607.44 1550.99 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
80. SRP14 ENSG00000140319 598.76 1528.82 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
81. TUBB2B ENSG00000137285 592.97 1514.04 tubulin beta 2B class IIb [Source:HGNC Symbol;Acc:HGNC:30829]
82. RPL27A ENSG00000166441 590.08 1506.66 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
83. NUCKS1 ENSG00000069275 584.29 1491.88 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
84. RPL26 ENSG00000161970 572.72 1462.33 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
85. EEF2 ENSG00000167658 555.37 1418.03 eukaryotic translation elongation factor 2 [Source:HGNC Symbol;Acc:HGNC:3214]
86. H2AFY ENSG00000113648 549.58 1403.25 H2A histone family member Y [Source:HGNC Symbol;Acc:HGNC:4740]
87. HMGN1 ENSG00000205581 546.69 1395.87 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
88. ATP5G2 543.80 1388.49 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
89. DPYSL2 ENSG00000092964 540.91 1381.11 dihydropyrimidinase like 2 [Source:HGNC Symbol;Acc:HGNC:3014]
90. HNRNPA1 ENSG00000135486 532.23 1358.95 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
91. MTRNR2L2 ENSG00000271043 532.23 1358.95 MT-RNR2 like 2 [Source:HGNC Symbol;Acc:HGNC:37156]
92. YBX1 ENSG00000065978 529.34 1351.57 Y-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8014]
93. CCND2 ENSG00000118971 517.77 1322.03 cyclin D2 [Source:HGNC Symbol;Acc:HGNC:1583]
94. RPL32 ENSG00000144713 517.77 1322.03 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
95. RPS7 ENSG00000171863 514.87 1314.63 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
96. RPS14 ENSG00000164587 500.41 1277.70 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
97. PFN2 ENSG00000070087 494.63 1262.95 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
98. CD24 ENSG00000272398 491.73 1255.54 CD24 molecule [Source:HGNC Symbol;Acc:HGNC:1645]
99. HNRNPK ENSG00000165119 488.84 1248.16 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
100. MORF4L1 ENSG00000185787 488.84 1248.16 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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