Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s26.

Sample reads: 391,652. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 15587.65 39799.79 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. HIST1H4C ENSG00000197061 8842.95 22578.61 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
3. RPS27 ENSG00000177954 6718.74 17154.89 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
4. EEF1A1 ENSG00000156508 5844.83 14923.55 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
5. RPS12 ENSG00000112306 4239.77 10825.36 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
6. RPL15 ENSG00000174748 3331.25 8505.65 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
7. RPL18A ENSG00000105640 3149.54 8041.69 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
8. RPL13AP20 ENSG00000234498 2734.22 6981.26 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
9. RPS20 ENSG00000008988 2708.26 6914.97 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
10. RPL34 ENSG00000109475 2647.69 6760.32 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
11. RPL37 ENSG00000145592 2500.60 6384.76 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
12. RPS15A ENSG00000134419 2500.60 6384.76 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
13. PTMA ENSG00000187514 2375.14 6064.42 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
14. RPS6 ENSG00000137154 2366.48 6042.31 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
15. PPIA ENSG00000196262 2362.16 6031.28 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
16. RPS2 ENSG00000140988 2349.18 5998.14 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
17. TUBA1B ENSG00000123416 2349.18 5998.14 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
18. RPL10A ENSG00000198755 2288.61 5843.48 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
19. RPL31 ENSG00000071082 2258.33 5766.17 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
20. RPL5 ENSG00000122406 2245.35 5733.03 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
21. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2154.50 5501.06 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
22. RPL35 ENSG00000136942 2106.91 5379.55 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
23. ACTB ENSG00000075624 2072.30 5291.18 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
24. RPS3A ENSG00000145425 1985.77 5070.25 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
25. RPS16 ENSG00000105193 1981.44 5059.19 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
26. RPS5 ENSG00000083845 1981.44 5059.19 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
27. RPL23 ENSG00000125691 1968.47 5026.07 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
28. RPLP0 ENSG00000089157 1864.63 4760.94 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
29. HNRNPC ENSG00000092199 1830.02 4672.57 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
30. RPL7A ENSG00000148303, ENSG00000280858 1817.04 4639.43 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
31. TPT1 ENSG00000133112 1765.13 4506.89 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
32. RPS23 ENSG00000186468 1760.80 4495.83 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
33. RPL9 ENSG00000163682 1752.15 4473.75 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
34. MTRNR2L2 ENSG00000271043 1700.23 4341.18 MT-RNR2 like 2 [Source:HGNC Symbol;Acc:HGNC:37156]
35. RPS11 ENSG00000142534 1652.65 4219.69 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
36. RPS29 ENSG00000213741 1643.99 4197.58 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
37. RPS13 ENSG00000110700 1635.34 4175.50 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
38. UBB ENSG00000170315 1635.34 4175.50 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
39. RPL10 ENSG00000147403 1574.77 4020.84 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
40. MTRNR2L8 ENSG00000255823 1553.14 3965.62 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
41. COX7A2 ENSG00000112695 1509.88 3855.16 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
42. ACTG1 ENSG00000184009 1410.37 3601.08 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
43. RPS8 ENSG00000142937 1397.39 3567.94 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
44. RPL11 ENSG00000142676 1358.46 3468.54 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
45. RPL30 ENSG00000156482 1336.83 3413.31 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
46. RPS28 ENSG00000233927 1310.87 3347.03 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
47. H2AFZ ENSG00000164032 1306.54 3335.98 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
48. RPL13 ENSG00000167526 1306.54 3335.98 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
49. GNAS ENSG00000087460 1241.65 3170.29 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
50. RPS27A ENSG00000143947 1155.12 2949.36 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
51. RPS7 ENSG00000171863 1155.12 2949.36 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
52. NPM1 ENSG00000181163 1116.18 2849.93 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
53. HMGB1 ENSG00000189403 1042.64 2662.16 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
54. RPL26 ENSG00000161970 1033.99 2640.08 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
55. RPS14 ENSG00000164587 1029.66 2629.02 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
56. ACTC1 ENSG00000159251 995.05 2540.65 actin, alpha, cardiac muscle 1 [Source:HGNC Symbol;Acc:HGNC:143]
57. GAPDH ENSG00000111640 973.42 2485.42 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
58. RPS25 ENSG00000118181, ENSG00000280831 951.79 2430.20 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
59. RPL32 ENSG00000144713 943.13 2408.08 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
60. TMSB4X ENSG00000205542 925.83 2363.91 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
61. MDK ENSG00000110492 921.50 2352.86 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
62. STMN1 ENSG00000117632 917.17 2341.80 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
63. SRP14 ENSG00000140319 912.85 2330.77 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
64. HBE1 ENSG00000213931 908.52 2319.71 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
65. RPL27A ENSG00000166441 882.56 2253.43 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
66. NNAT ENSG00000053438 873.91 2231.35 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
67. SERF2 ENSG00000140264 873.91 2231.35 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
68. HSP90AB1 ENSG00000096384 869.59 2220.32 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
69. PGAM1 ENSG00000171314 834.98 2131.95 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
70. TOMM6 ENSG00000214736 834.98 2131.95 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
71. MTRNR2L1 ENSG00000256618 804.69 2054.61 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
72. UBA52 ENSG00000221983 774.41 1977.29 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
73. HMGN1 ENSG00000205581 765.75 1955.18 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
74. NGFRAP1 NGFRAP1 761.43 1944.15
75. RPL35A ENSG00000182899 752.78 1922.07 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
76. FAU ENSG00000149806 748.45 1911.01 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
77. PFN1 ENSG00000108518 744.12 1899.95 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
78. EIF4G2 ENSG00000110321 718.17 1833.70 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
79. RPS19 ENSG00000105372 718.17 1833.70 ribosomal protein S19 [Source:HGNC Symbol;Acc:HGNC:10402]
80. RPS9 ENSG00000170889, ENSG00000274646, ENSG00000274950, ENSG00000278270 718.17 1833.70 ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:10442]
81. RPL39 ENSG00000198918 679.23 1734.27 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
82. RPLP1 ENSG00000137818 670.58 1712.19 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
83. RPL22 ENSG00000116251 657.60 1679.04 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
84. RPL4 ENSG00000174444 644.62 1645.90 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
85. TMEM258 ENSG00000134825 644.62 1645.90 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
86. DYNLL1 ENSG00000088986 622.99 1590.67 dynein light chain LC8-type 1 [Source:HGNC Symbol;Acc:HGNC:15476]
87. RPL6 ENSG00000089009 614.33 1568.56 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
88. RPS21 ENSG00000171858 610.01 1557.53 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
89. RPL7 ENSG00000147604 592.70 1513.33 ribosomal protein L7 [Source:HGNC Symbol;Acc:HGNC:10363]
90. RPL3 ENSG00000100316 588.38 1502.30 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
91. MYL6 ENSG00000092841 584.05 1491.25 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
92. VIM ENSG00000026025 579.72 1480.19 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
93. RPS15 ENSG00000115268 566.74 1447.05 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
94. MORF4L1 ENSG00000185787 562.42 1436.02 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
95. RPL14 ENSG00000188846 549.44 1402.88 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
96. RPL37A ENSG00000197756 549.44 1402.88 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
97. CFL1 ENSG00000172757 540.79 1380.79 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
98. SUMO2 ENSG00000188612 540.79 1380.79 small ubiquitin-like modifier 2 [Source:HGNC Symbol;Acc:HGNC:11125]
99. TUBA1A ENSG00000167552 540.79 1380.79 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
100. CKS1B ENSG00000173207 536.46 1369.74 CDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA