Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s24.

Sample reads: 391,642. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 12143.76 31007.26 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. EEF1A1 ENSG00000156508 4585.29 11707.85 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 3559.27 9088.06 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
4. ACTB ENSG00000075624 3088.22 7885.30 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
5. TUBA1B ENSG00000123416 3050.32 7788.53 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
6. PTMA ENSG00000187514 2803.97 7159.51 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
7. RPS27 ENSG00000177954 2641.54 6744.77 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
8. RPS12 ENSG00000112306 2596.87 6630.72 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
9. HIST1H4C ENSG00000197061 2573.86 6571.96 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
10. PPIA ENSG00000196262 2507.53 6402.60 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
11. MTRNR2L8 ENSG00000255823 2010.08 5132.44 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
12. GNAS ENSG00000087460 1972.86 5037.40 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
13. ACTG1 ENSG00000184009 1910.60 4878.43 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
14. RPL31 ENSG00000071082 1837.50 4691.78 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
15. RPL15 ENSG00000174748 1823.97 4657.23 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
16. RPL18A ENSG00000105640 1823.29 4655.50 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
17. RPL5 ENSG00000122406 1818.55 4643.39 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
18. RPS6 ENSG00000137154 1707.56 4360.00 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
19. RPL10A ENSG00000198755 1627.70 4156.09 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
20. RPL34 ENSG00000109475 1611.45 4114.59 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
21. RPS20 ENSG00000008988 1546.48 3948.70 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
22. RPS2 ENSG00000140988 1503.16 3838.09 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
23. GAPDH ENSG00000111640 1486.92 3796.63 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
24. HNRNPC ENSG00000092199 1478.12 3774.16 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
25. HBE1 ENSG00000213931 1474.06 3763.79 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
26. MTRNR2L1 ENSG00000256618 1426.01 3641.10 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
27. RPL7A ENSG00000148303, ENSG00000280858 1424.66 3637.65 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
28. RPL37 ENSG00000145592 1398.94 3571.98 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
29. RPS23 ENSG00000186468 1390.14 3549.51 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
30. RPLP0 ENSG00000089157 1366.45 3489.02 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
31. RPL10 ENSG00000147403 1359.68 3471.74 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
32. RPL13AP20 ENSG00000234498 1300.13 3319.69 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
33. NNAT ENSG00000053438 1280.50 3269.56 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
34. HSP90AB1 ENSG00000096384 1270.35 3243.65 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
35. RPS16 ENSG00000105193 1268.99 3240.17 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
36. RPL11 ENSG00000142676 1232.45 3146.88 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
37. TPT1 ENSG00000133112 1227.03 3133.04 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
38. TUBA1A ENSG00000167552 1211.47 3093.31 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
39. ACTC1 ENSG00000159251 1193.87 3048.37 actin, alpha, cardiac muscle 1 [Source:HGNC Symbol;Acc:HGNC:143]
40. RPS13 ENSG00000110700 1189.81 3038.00 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
41. RPS11 ENSG00000142534 1188.45 3034.53 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
42. RPL35 ENSG00000136942 1160.71 2963.70 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
43. RPL13 ENSG00000167526 1158.68 2958.51 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
44. UBB ENSG00000170315 1149.20 2934.31 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
45. RPS15A ENSG00000134419 1124.16 2870.37 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
46. HMGB1 ENSG00000189403 1084.90 2770.13 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
47. RPL23 ENSG00000125691 1023.32 2612.89 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
48. RPS5 ENSG00000083845 1003.69 2562.77 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
49. RPS8 ENSG00000142937 972.56 2483.29 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
50. STMN1 ENSG00000117632 941.42 2403.77 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
51. MDK ENSG00000110492 929.24 2372.67 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
52. NPM1 ENSG00000181163 925.18 2362.31 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
53. RPS28 ENSG00000233927 925.18 2362.31 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
54. MTRNR2L2 ENSG00000271043 894.05 2282.82 MT-RNR2 like 2 [Source:HGNC Symbol;Acc:HGNC:37156]
55. TMSB4X ENSG00000205542 881.87 2251.72 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
56. H2AFZ ENSG00000164032 873.07 2229.25 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
57. RPS27A ENSG00000143947 861.56 2199.86 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
58. PFN1 ENSG00000108518 808.77 2065.07 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
59. SERF2 ENSG00000140264 795.24 2030.53 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
60. SRSF2 ENSG00000161547 792.53 2023.61 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
61. UBA52 ENSG00000221983 784.41 2002.87 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
62. SRP14 ENSG00000140319 762.75 1947.57 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
63. NGFRAP1 NGFRAP1 755.98 1930.28
64. RPS29 ENSG00000213741 752.60 1921.65 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
65. RPS3A ENSG00000145425 731.62 1868.08 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
66. HNRNPD ENSG00000138668 723.50 1847.35 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
67. RPL4 ENSG00000174444 705.22 1800.67 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
68. EIF4G2 ENSG00000110321 683.56 1745.37 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
69. COX7A2 ENSG00000112695 675.44 1724.63 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
70. TOMM6 ENSG00000214736 672.74 1717.74 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
71. RPL22 ENSG00000116251 667.32 1703.90 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
72. RPL3 ENSG00000100316 656.49 1676.25 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
73. HMGN1 ENSG00000205581 655.82 1674.54 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
74. RPL6 ENSG00000089009 653.79 1669.35 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
75. HNRNPA1 ENSG00000135486 649.72 1658.96 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
76. MYL6 ENSG00000092841 649.05 1657.25 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
77. RPS14 ENSG00000164587 643.63 1643.41 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
78. VIM ENSG00000026025 643.63 1643.41 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
79. TUBB3 ENSG00000258947 640.25 1634.78 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
80. RPS7 ENSG00000171863 635.51 1622.68 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
81. RPL27A ENSG00000166441 624.68 1595.03 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
82. PGAM1 ENSG00000171314 617.24 1576.03 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
83. CFL1 ENSG00000172757 611.15 1560.48 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
84. RPL30 ENSG00000156482 604.38 1543.19 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
85. RPL32 ENSG00000144713 603.70 1541.46 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
86. NUCKS1 ENSG00000069275 586.11 1496.54 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
87. RPL26 ENSG00000161970 584.75 1493.07 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
88. ATP5G2 576.63 1472.34 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
89. RPL39 ENSG00000198918 573.25 1463.71 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
90. CAPNS1 ENSG00000126247 559.03 1427.40 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
91. PEG10 ENSG00000242265 546.17 1394.56 paternally expressed 10 [Source:HGNC Symbol;Acc:HGNC:14005]
92. RPLP1 ENSG00000137818 538.05 1373.83 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
93. PCBP1 ENSG00000169564 527.22 1346.18 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
94. RPS15 ENSG00000115268 523.16 1335.81 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
95. RPS19 ENSG00000105372 519.78 1327.18 ribosomal protein S19 [Source:HGNC Symbol;Acc:HGNC:10402]
96. MORF4L1 ENSG00000185787 519.10 1325.44 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
97. CKB ENSG00000166165 515.04 1315.08 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
98. RPL9 ENSG00000163682 506.92 1294.34 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
99. IFITM2 ENSG00000185201 505.57 1290.90 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
100. RPS25 ENSG00000118181, ENSG00000280831 504.89 1289.16 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA