Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s23.

Sample reads: 391,653. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 13396.19 34204.26 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. HIST1H4C ENSG00000197061 7953.69 20308.02 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
3. RPS27 ENSG00000177954 5205.70 13291.62 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
4. EEF1A1 ENSG00000156508 5089.22 12994.22 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
5. RPS12 ENSG00000112306 3399.18 8679.07 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
6. TUBA1B ENSG00000123416 3366.71 8596.16 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
7. RPL18A ENSG00000105640 2959.96 7557.62 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
8. RPL31 ENSG00000071082 2927.49 7474.71 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
9. PTMA ENSG00000187514 2690.70 6870.12 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
10. ACTB ENSG00000075624 2637.23 6733.59 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
11. RPL10A ENSG00000198755 2602.85 6645.81 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
12. RPL15 ENSG00000174748 2513.10 6416.66 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
13. PPIA ENSG00000196262 2474.91 6319.15 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
14. RPL34 ENSG00000109475 2291.58 5851.05 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
15. RPS20 ENSG00000008988 2285.85 5836.42 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
16. RPL37 ENSG00000145592 2222.83 5675.51 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
17. RPS6 ENSG00000137154 2194.19 5602.39 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
18. HBE1 ENSG00000213931 2138.81 5460.99 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
19. ACTG1 ENSG00000184009 2133.08 5446.36 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
20. RPL35 ENSG00000136942 2110.16 5387.84 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
21. RPL5 ENSG00000122406 2106.34 5378.08 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
22. RPS2 ENSG00000140988 2098.70 5358.57 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
23. RPL7A ENSG00000148303, ENSG00000280858 2089.16 5334.22 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
24. RPS16 ENSG00000105193 2079.61 5309.83 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
25. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2035.69 5197.69 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
26. RPS23 ENSG00000186468 2014.68 5144.05 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
27. RPS15A ENSG00000134419 1974.58 5041.66 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
28. RPS5 ENSG00000083845 1944.02 4963.63 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
29. RPS11 ENSG00000142534 1772.15 4524.80 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
30. RPLP0 ENSG00000089157 1743.51 4451.67 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
31. RPL23 ENSG00000125691 1691.95 4320.03 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
32. HNRNPC ENSG00000092199 1674.76 4276.14 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
33. RPL13AP20 ENSG00000234498 1655.67 4227.39 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
34. RPL10 ENSG00000147403 1579.28 4032.35 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
35. GNAS ENSG00000087460 1554.45 3968.95 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
36. RPS8 ENSG00000142937 1548.73 3954.35 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
37. RPS3A ENSG00000145425 1491.44 3808.07 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
38. RPL11 ENSG00000142676 1468.52 3749.55 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
39. UBB ENSG00000170315 1443.70 3686.17 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
40. TPT1 ENSG00000133112 1392.13 3554.50 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
41. RPS13 ENSG00000110700 1382.59 3530.14 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
42. MYL6 ENSG00000092841 1334.84 3408.22 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
43. HSP90AB1 ENSG00000096384 1289.01 3291.21 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
44. RPS29 ENSG00000213741 1271.83 3247.34 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
45. RPL13 ENSG00000167526 1252.73 3198.57 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
46. COX7A2 ENSG00000112695 1197.35 3057.17 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
47. RPL9 ENSG00000163682 1195.44 3052.30 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
48. RPL32 ENSG00000144713 1193.53 3047.42 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
49. HBZ ENSG00000130656 1168.71 2984.05 hemoglobin subunit zeta [Source:HGNC Symbol;Acc:HGNC:4835]
50. MDK ENSG00000110492 1151.52 2940.16 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
51. RPS27A ENSG00000143947 1134.33 2896.27 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
52. HMGB1 ENSG00000189403 1113.33 2842.65 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
53. TUBA1A ENSG00000167552 1109.51 2832.89 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
54. RPS7 ENSG00000171863 1090.41 2784.13 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
55. TMSB4X ENSG00000205542 1031.21 2632.97 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
56. RPS28 ENSG00000233927 1027.39 2623.22 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
57. SERF2 ENSG00000140264 1015.93 2593.96 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
58. RPS14 ENSG00000164587 981.56 2506.20 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
59. NNAT ENSG00000053438 949.10 2423.32 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
60. RPL27A ENSG00000166441 947.19 2418.44 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
61. RPL30 ENSG00000156482 941.46 2403.81 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
62. H2AFZ ENSG00000164032 937.64 2394.06 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
63. STMN1 ENSG00000117632 926.18 2364.80 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
64. RPL26 ENSG00000161970 914.72 2335.54 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
65. FAU ENSG00000149806 907.08 2316.03 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
66. NGFRAP1 NGFRAP1 897.54 2291.67
67. MTRNR2L1 ENSG00000256618 893.72 2281.92 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
68. SRP14 ENSG00000140319 887.99 2267.29 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
69. RPL22 ENSG00000116251 878.44 2242.91 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
70. NPM1 ENSG00000181163 832.61 2125.89 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
71. UBA52 ENSG00000221983 824.97 2106.38 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
72. GAPDH ENSG00000111640 815.42 2082.00 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
73. RPS9 ENSG00000170889, ENSG00000274646, ENSG00000274950, ENSG00000278270 786.78 2008.87 ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:10442]
74. PGAM1 ENSG00000171314 777.23 1984.49 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
75. TOMM6 ENSG00000214736 777.23 1984.49 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
76. RPL35A ENSG00000182899 769.59 1964.98 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
77. PFN1 ENSG00000108518 731.40 1867.47 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
78. RPL4 ENSG00000174444 704.66 1799.20 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
79. VIM ENSG00000026025 704.66 1799.20 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
80. RPL39 ENSG00000198918 697.02 1779.69 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
81. RPL3 ENSG00000100316 693.20 1769.94 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
82. RPS19 ENSG00000105372 687.47 1755.31 ribosomal protein S19 [Source:HGNC Symbol;Acc:HGNC:10402]
83. RPS25 ENSG00000118181, ENSG00000280831 677.93 1730.95 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
84. ACTC1 ENSG00000159251 666.47 1701.69 actin, alpha, cardiac muscle 1 [Source:HGNC Symbol;Acc:HGNC:143]
85. TMEM258 ENSG00000134825 641.64 1638.29 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
86. MTRNR2L8 ENSG00000255823 639.73 1633.41 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
87. HNRNPD ENSG00000138668 634.00 1618.78 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
88. CFL1 ENSG00000172757 611.09 1560.29 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
89. HMGN1 ENSG00000205581 611.09 1560.29 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
90. RPLP1 ENSG00000137818 593.90 1516.39 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
91. RPL6 ENSG00000089009 586.26 1496.89 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
92. RPS21 ENSG00000171858 582.44 1487.13 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
93. RPL14 ENSG00000188846 576.71 1472.50 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
94. MORF4L1 ENSG00000185787 570.99 1457.90 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
95. RPS15 ENSG00000115268 565.26 1443.27 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
96. RPL19 ENSG00000108298 559.53 1428.64 ribosomal protein L19 [Source:HGNC Symbol;Acc:HGNC:10312]
97. EIF4G2 ENSG00000110321 557.62 1423.76 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
98. SEPW1 544.25 1389.62 selenoprotein W, 1
99. PKM ENSG00000067225 536.61 1370.12 pyruvate kinase M1/2 [Source:HGNC Symbol;Acc:HGNC:9021]
100. CAPNS1 ENSG00000126247 534.70 1365.24 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA