Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s16.

Sample reads: 391,631. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 16318.07 41666.94 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. HIST1H4C ENSG00000197061 11949.79 30512.87 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
3. RPS27 ENSG00000177954 4915.40 12551.10 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
4. EEF1A1 ENSG00000156508 3656.15 9335.70 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
5. TUBA1B ENSG00000123416 3439.04 8781.33 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
6. RPS12 ENSG00000112306 3065.61 7827.80 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
7. RPL31 ENSG00000071082 2996.13 7650.39 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
8. RPL37 ENSG00000145592 2961.40 7561.71 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
9. ACTB ENSG00000075624 2709.55 6918.63 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
10. RPL18A ENSG00000105640 2596.65 6630.35 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
11. RPL15 ENSG00000174748 2553.23 6519.48 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
12. RPL34 ENSG00000109475 2492.44 6364.25 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
13. RPS23 ENSG00000186468 2475.07 6319.90 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
14. PPIA ENSG00000196262 2466.38 6297.71 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
15. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2240.59 5721.18 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
16. PTMA ENSG00000187514 2127.69 5432.89 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
17. RPS15A ENSG00000134419 2084.27 5322.02 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
18. RPS29 ENSG00000213741 1927.95 4922.87 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
19. RPS20 ENSG00000008988 1849.79 4723.30 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
20. H2AFZ ENSG00000164032 1728.20 4412.83 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
21. RPL13AP20 ENSG00000234498 1719.52 4390.66 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
22. HNRNPC ENSG00000092199 1710.84 4368.50 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
23. RPL10A ENSG00000198755 1684.78 4301.96 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
24. RPS2 ENSG00000140988 1589.25 4058.03 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
25. RPL10 ENSG00000147403 1519.78 3880.64 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
26. RPLP0 ENSG00000089157 1519.78 3880.64 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
27. RPL35 ENSG00000136942 1502.41 3836.29 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
28. RPL23 ENSG00000125691 1493.72 3814.10 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
29. RPL5 ENSG00000122406 1424.25 3636.71 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
30. ACTG1 ENSG00000184009 1354.77 3459.30 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
31. RPS6 ENSG00000137154 1311.35 3348.43 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
32. RPS16 ENSG00000105193 1293.98 3304.08 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
33. RPL7A ENSG00000148303, ENSG00000280858 1285.30 3281.92 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
34. TPT1 ENSG00000133112 1267.93 3237.56 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
35. HMGB1 ENSG00000189403 1224.51 3126.69 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
36. RPL11 ENSG00000142676 1215.82 3104.50 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
37. RPL30 ENSG00000156482 1189.77 3037.99 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
38. NPM1 ENSG00000181163 1172.40 2993.63 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
39. RPS27A ENSG00000143947 1163.72 2971.47 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
40. UBB ENSG00000170315 1137.66 2904.93 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
41. GNAS ENSG00000087460 1120.29 2860.57 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
42. RPS8 ENSG00000142937 1094.24 2794.06 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
43. MTRNR2L8 ENSG00000255823 1076.87 2749.71 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
44. COX7A2 ENSG00000112695 1068.19 2727.54 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
45. RPS5 ENSG00000083845 1059.50 2705.35 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
46. RPS13 ENSG00000110700 1042.13 2661.00 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
47. RPS28 ENSG00000233927 1024.76 2616.65 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
48. RPL13 ENSG00000167526 990.03 2527.97 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
49. RPS11 ENSG00000142534 990.03 2527.97 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
50. RPL9 ENSG00000163682 981.34 2505.78 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
51. GAPDH ENSG00000111640 955.29 2439.26 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
52. RPS3A ENSG00000145425 955.29 2439.26 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
53. RPL32 ENSG00000144713 937.92 2394.91 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
54. ACTC1 ENSG00000159251 929.24 2372.74 actin, alpha, cardiac muscle 1 [Source:HGNC Symbol;Acc:HGNC:143]
55. MYL6 ENSG00000092841 911.87 2328.39 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
56. RPS7 ENSG00000171863 903.18 2306.20 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
57. MDK ENSG00000110492 833.71 2128.81 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
58. NGFRAP1 NGFRAP1 816.34 2084.46
59. EIF4G2 ENSG00000110321 798.97 2040.11 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
60. HNRNPD ENSG00000138668 798.97 2040.11 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
61. RPL26 ENSG00000161970 781.60 1995.76 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
62. TOMM6 ENSG00000214736 781.60 1995.76 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
63. MORF4L1 ENSG00000185787 772.92 1973.59 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
64. TMSB4X ENSG00000205542 772.92 1973.59 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
65. MTRNR2L1 ENSG00000256618 764.23 1951.40 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
66. SRP14 ENSG00000140319 764.23 1951.40 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
67. HSP90AB1 ENSG00000096384 746.86 1907.05 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
68. STMN1 ENSG00000117632 746.86 1907.05 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
69. PGAM1 ENSG00000171314 703.44 1796.18 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
70. FAU ENSG00000149806 694.76 1774.02 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
71. RPS14 ENSG00000164587 694.76 1774.02 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
72. NNAT ENSG00000053438 677.39 1729.66 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
73. SERF2 ENSG00000140264 660.02 1685.31 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
74. RPL37A ENSG00000197756 651.33 1663.12 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
75. VIM ENSG00000026025 642.65 1640.96 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
76. MARCKS ENSG00000277443 633.96 1618.77 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
77. COL3A1 ENSG00000168542 616.60 1574.44 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
78. TUBA1A ENSG00000167552 590.54 1507.90 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
79. HDAC2 ENSG00000196591 581.86 1485.73 histone deacetylase 2 [Source:HGNC Symbol;Acc:HGNC:4853]
80. PCBP1 ENSG00000169564 581.86 1485.73 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
81. NUCKS1 ENSG00000069275 564.49 1441.38 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
82. RPL22 ENSG00000116251 564.49 1441.38 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
83. RPL6 ENSG00000089009 564.49 1441.38 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
84. RPL27A ENSG00000166441 555.80 1419.19 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
85. RPL7 ENSG00000147604 555.80 1419.19 ribosomal protein L7 [Source:HGNC Symbol;Acc:HGNC:10363]
86. RPS9 ENSG00000170889, ENSG00000274646, ENSG00000274950, ENSG00000278270 555.80 1419.19 ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:10442]
87. PFN1 ENSG00000108518 547.12 1397.03 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
88. RPL39 ENSG00000198918 547.12 1397.03 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
89. RPS15 ENSG00000115268 547.12 1397.03 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
90. HMGN1 ENSG00000205581 538.44 1374.87 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
91. PKM ENSG00000067225 538.44 1374.87 pyruvate kinase M1/2 [Source:HGNC Symbol;Acc:HGNC:9021]
92. RPS25 ENSG00000118181, ENSG00000280831 538.44 1374.87 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
93. MALAT1 ENSG00000251562 521.07 1330.51 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
94. RPS19 ENSG00000105372 521.07 1330.51 ribosomal protein S19 [Source:HGNC Symbol;Acc:HGNC:10402]
95. MARCKSL1 ENSG00000175130 512.38 1308.32 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
96. TMEM258 ENSG00000134825 503.70 1286.16 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
97. DPYSL2 ENSG00000092964 486.33 1241.81 dihydropyrimidinase like 2 [Source:HGNC Symbol;Acc:HGNC:3014]
98. EEF1B2 ENSG00000114942, ENSG00000283391 486.33 1241.81 eukaryotic translation elongation factor 1 beta 2 [Source:HGNC Symbol;Acc:HGNC:3208]
99. PCBP2 ENSG00000197111 486.33 1241.81 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
100. SEPW1 486.33 1241.81 selenoprotein W, 1
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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