Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s9.

Sample reads: 391,650. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 8804.14 22479.62 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 4984.05 12725.78 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPL41 ENSG00000229117 3084.20 7874.89 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
4. RPS20 ENSG00000008988 2792.70 7130.60 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
5. RPL5 ENSG00000122406 2637.78 6735.05 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
6. PPIA ENSG00000196262 2130.20 5439.04 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
7. TUBA1B ENSG00000123416 2069.04 5282.88 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
8. ACTG1 ENSG00000184009 2050.70 5236.05 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
9. ACTB ENSG00000075624 1914.12 4887.32 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
10. RPS6 ENSG00000137154 1883.54 4809.25 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
11. RPL15 ENSG00000174748 1791.81 4575.03 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
12. RPS5 ENSG00000083845 1769.39 4517.79 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
13. RPL37 ENSG00000145592 1708.23 4361.63 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
14. RPL9 ENSG00000163682 1702.12 4346.03 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
15. RPL18A ENSG00000105640 1681.73 4293.96 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
16. STMN1 ENSG00000117632 1640.97 4189.89 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
17. RPL23 ENSG00000125691 1624.66 4148.25 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
18. RPS12 ENSG00000112306 1622.62 4143.04 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
19. VIM ENSG00000026025 1596.12 4075.38 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
20. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1583.89 4044.15 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
21. RPS23 ENSG00000186468 1500.31 3830.74 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
22. RPS27A ENSG00000143947 1453.43 3711.04 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
23. RPL31 ENSG00000071082 1428.96 3648.57 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
24. RPL10A ENSG00000198755 1390.23 3549.68 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
25. RPS11 ENSG00000142534 1390.23 3549.68 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
26. RPS27 ENSG00000177954 1378.00 3518.45 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
27. GNAS ENSG00000087460 1312.77 3351.90 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
28. RPLP1 ENSG00000137818 1296.46 3310.25 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
29. MDK ENSG00000110492 1239.39 3164.54 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
30. RPL34 ENSG00000109475 1212.89 3096.87 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
31. MTRNR2L1 ENSG00000256618 1117.08 2852.24 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
32. RPL13 ENSG00000167526 1117.08 2852.24 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
33. RPS15A ENSG00000134419 1082.43 2763.77 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
34. MTRNR2L8 ENSG00000255823 1072.23 2737.73 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
35. RPL14 ENSG00000188846 1043.69 2664.85 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
36. HSP90AB1 ENSG00000096384 1029.43 2628.44 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
37. RPS21 ENSG00000171858 1023.31 2612.82 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
38. RPS2 ENSG00000140988 988.66 2524.35 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
39. RPS28 ENSG00000233927 972.35 2482.70 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
40. RPS8 ENSG00000142937 960.12 2451.48 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
41. GAPDH ENSG00000111640 958.08 2446.27 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
42. RPL6 ENSG00000089009 927.50 2368.19 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
43. RPS25 ENSG00000118181, ENSG00000280831 915.27 2336.96 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
44. NNAT ENSG00000053438 898.96 2295.32 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
45. RPS3A ENSG00000145425 892.85 2279.72 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
46. RPS13 ENSG00000110700 884.69 2258.88 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
47. HNRNPC ENSG00000092199 872.46 2227.65 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
48. NGFRAP1 NGFRAP1 864.31 2206.84
49. CFL1 ENSG00000172757 860.23 2196.43 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
50. RPLP0 ENSG00000089157 852.08 2175.62 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
51. RPL7A ENSG00000148303, ENSG00000280858 850.04 2170.41 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
52. RPS15 ENSG00000115268 850.04 2170.41 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
53. RPL10 ENSG00000147403 837.81 2139.18 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
54. RBM3 ENSG00000102317 823.54 2102.75 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
55. RPL35 ENSG00000136942 821.50 2097.54 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
56. TPT1 ENSG00000133112 813.35 2076.73 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
57. RPL11 ENSG00000142676 788.89 2014.27 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
58. RPS29 ENSG00000213741 788.89 2014.27 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
59. UBB ENSG00000170315 786.85 2009.07 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
60. RPS16 ENSG00000105193 784.81 2003.86 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
61. RPS7 ENSG00000171863 766.46 1957.00 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
62. RPL3 ENSG00000100316 756.27 1930.99 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
63. TUBB3 ENSG00000258947 739.96 1889.34 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
64. NPM1 ENSG00000181163 737.92 1884.13 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
65. RPS14 ENSG00000164587 729.77 1863.32 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
66. RPL37A ENSG00000197756 727.73 1858.11 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
67. MARCKS ENSG00000277443 721.62 1842.51 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
68. HNRNPD ENSG00000138668 701.23 1790.45 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
69. CKB ENSG00000166165 695.12 1774.85 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
70. PCBP2 ENSG00000197111 678.81 1733.21 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
71. H2AFZ ENSG00000164032 670.66 1712.40 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
72. HNRNPH1 ENSG00000169045, ENSG00000284254 660.46 1686.35 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
73. FTH1 ENSG00000167996 656.39 1675.96 ferritin heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:3976]
74. EIF4G2 ENSG00000110321 648.23 1655.13 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
75. RPL39 ENSG00000198918 644.16 1644.73 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
76. HNRNPA1 ENSG00000135486 636.00 1623.90 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
77. SRSF3 ENSG00000112081 636.00 1623.90 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
78. HMGN1 ENSG00000205581 613.58 1566.65 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
79. MARCKSL1 ENSG00000175130 605.42 1545.82 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
80. RPL29 ENSG00000162244 601.35 1535.43 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
81. RPL26 ENSG00000161970 593.19 1514.59 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
82. RPL18 ENSG00000063177 587.08 1498.99 ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:10310]
83. ATP5G2 580.96 1483.37 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
84. UBA52 ENSG00000221983 576.89 1472.97 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
85. DDX17 ENSG00000100201 574.85 1467.77 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
86. CD24 ENSG00000272398 572.81 1462.56 CD24 molecule [Source:HGNC Symbol;Acc:HGNC:1645]
87. RPL35A ENSG00000182899 556.50 1420.91 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
88. RAN ENSG00000132341 546.31 1394.89 RAN, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9846]
89. RPL4 ENSG00000174444 544.27 1389.69 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
90. RPL12 ENSG00000197958 538.16 1374.08 ribosomal protein L12 [Source:HGNC Symbol;Acc:HGNC:10302]
91. TUBB2B ENSG00000137285 538.16 1374.08 tubulin beta 2B class IIb [Source:HGNC Symbol;Acc:HGNC:30829]
92. MAP1B ENSG00000131711 536.12 1368.88 microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
93. RPL38 ENSG00000172809 536.12 1368.88 ribosomal protein L38 [Source:HGNC Symbol;Acc:HGNC:10349]
94. RPS19 ENSG00000105372 534.08 1363.67 ribosomal protein S19 [Source:HGNC Symbol;Acc:HGNC:10402]
95. SERF2 ENSG00000140264 527.96 1348.04 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
96. SET ENSG00000119335 523.89 1337.65 SET nuclear proto-oncogene [Source:HGNC Symbol;Acc:HGNC:10760]
97. RPL32 ENSG00000144713 519.81 1327.23 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
98. PFN2 ENSG00000070087 515.73 1316.81 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
99. RPS14P3 511.66 1306.42 ribosomal protein S14 pseudogene 3
100. RPL13AP20 ENSG00000234498 505.54 1290.80 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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