Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s8.

Sample reads: 391,635. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 8732.93 22298.66 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 4789.20 12228.74 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPL41 ENSG00000229117 3075.08 7851.91 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
4. RPS20 ENSG00000008988 2821.79 7205.16 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
5. RPL5 ENSG00000122406 2561.37 6540.20 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
6. RPL15 ENSG00000174748 2031.62 5187.54 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
7. ACTG1 ENSG00000184009 1995.95 5096.46 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
8. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1940.65 4955.26 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
9. PPIA ENSG00000196262 1908.55 4873.29 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
10. RPS6 ENSG00000137154 1908.55 4873.29 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
11. TUBA1B ENSG00000123416 1883.57 4809.51 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
12. ACTB ENSG00000075624 1856.82 4741.20 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
13. RPL18A ENSG00000105640 1851.47 4727.54 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
14. RPL9 ENSG00000163682 1780.12 4545.36 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
15. RPS5 ENSG00000083845 1706.99 4358.63 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
16. RPL13AP20 ENSG00000234498 1667.75 4258.43 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
17. RPL23 ENSG00000125691 1639.21 4185.56 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
18. STMN1 ENSG00000117632 1589.27 4058.04 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
19. RPS27A ENSG00000143947 1582.13 4039.81 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
20. RPL37 ENSG00000145592 1562.51 3989.71 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
21. RPS11 ENSG00000142534 1553.59 3966.94 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
22. GAPDH ENSG00000111640 1526.84 3898.63 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
23. VIM ENSG00000026025 1496.51 3821.19 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
24. RPS23 ENSG00000186468 1482.24 3784.75 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
25. RPL10A ENSG00000198755 1467.97 3748.31 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
26. RPL31 ENSG00000071082 1435.87 3666.35 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
27. RPS12 ENSG00000112306 1414.46 3611.68 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
28. GNAS ENSG00000087460 1380.57 3525.15 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
29. RPL34 ENSG00000109475 1369.87 3497.83 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
30. RPS15A ENSG00000134419 1264.63 3229.11 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
31. RPS27 ENSG00000177954 1259.28 3215.45 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
32. RPL13 ENSG00000167526 1211.12 3092.47 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
33. MTRNR2L8 ENSG00000255823 1130.86 2887.54 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
34. RPL7A ENSG00000148303, ENSG00000280858 1116.59 2851.10 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
35. MDK ENSG00000110492 1100.53 2810.09 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
36. RPS8 ENSG00000142937 984.60 2514.08 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
37. RPL10 ENSG00000147403 981.03 2504.96 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
38. RPS25 ENSG00000118181, ENSG00000280831 972.11 2482.19 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
39. RPL35 ENSG00000136942 970.33 2477.64 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
40. RPS2 ENSG00000140988 968.54 2473.07 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
41. RPL3 ENSG00000100316 964.97 2463.95 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
42. HSP90AB1 ENSG00000096384 963.19 2459.41 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
43. RPL37A ENSG00000197756 947.14 2418.43 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
44. RPL6 ENSG00000089009 938.22 2395.65 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
45. RPL14 ENSG00000188846 936.44 2391.11 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
46. RPLP1 ENSG00000137818 932.87 2381.99 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
47. RPS21 ENSG00000171858 911.46 2327.32 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
48. RPS3A ENSG00000145425 906.11 2313.66 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
49. RPL29 ENSG00000162244 888.28 2268.13 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
50. RPS28 ENSG00000233927 886.49 2263.56 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
51. TPT1 ENSG00000133112 881.14 2249.90 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
52. MTRNR2L1 ENSG00000256618 877.57 2240.79 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
53. NNAT ENSG00000053438 872.22 2227.13 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
54. UBB ENSG00000170315 872.22 2227.13 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
55. RPS13 ENSG00000110700 850.82 2172.48 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
56. RPLP0 ENSG00000089157 849.04 2167.94 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
57. RPS15 ENSG00000115268 843.68 2154.25 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
58. CFL1 ENSG00000172757 841.90 2149.71 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
59. RPS16 ENSG00000105193 834.77 2131.50 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
60. TUBB3 ENSG00000258947 827.63 2113.27 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
61. NGFRAP1 NGFRAP1 820.50 2095.06
62. RPS14 ENSG00000164587 781.25 1994.84 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
63. RPS29 ENSG00000213741 750.93 1917.42 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
64. RPS7 ENSG00000171863 750.93 1917.42 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
65. CKB ENSG00000166165 742.01 1894.65 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
66. NPM1 ENSG00000181163 742.01 1894.65 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
67. HNRNPC ENSG00000092199 733.10 1871.90 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
68. RPL11 ENSG00000142676 722.39 1844.55 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
69. HNRNPD ENSG00000138668 718.83 1835.46 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
70. RBM3 ENSG00000102317 717.04 1830.89 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
71. RPL39 ENSG00000198918 709.91 1812.68 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
72. EIF4G2 ENSG00000110321 700.99 1789.91 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
73. HNRNPA1 ENSG00000135486 676.02 1726.15 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
74. MARCKS ENSG00000277443 676.02 1726.15 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
75. RPL32 ENSG00000144713 658.18 1680.60 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
76. RPL4 ENSG00000174444 658.18 1680.60 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
77. ATP5G2 652.83 1666.94 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
78. H2AFZ ENSG00000164032 624.29 1594.06 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
79. PFN1 ENSG00000108518 599.32 1530.30 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
80. SERF2 ENSG00000140264 593.97 1516.64 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
81. UBA52 ENSG00000221983 590.40 1507.53 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
82. RPL26 ENSG00000161970 581.48 1484.75 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
83. SRSF3 ENSG00000112081 579.70 1480.21 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
84. GABARAP ENSG00000170296 569.00 1452.88 GABA type A receptor-associated protein [Source:HGNC Symbol;Acc:HGNC:4067]
85. PCBP2 ENSG00000197111 556.51 1420.99 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
86. DDX17 ENSG00000100201 547.59 1398.22 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
87. RPL35A ENSG00000182899 544.02 1389.10 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
88. RPL38 ENSG00000172809 535.11 1366.35 ribosomal protein L38 [Source:HGNC Symbol;Acc:HGNC:10349]
89. RPS19 ENSG00000105372 533.32 1361.78 ribosomal protein S19 [Source:HGNC Symbol;Acc:HGNC:10402]
90. CD24 ENSG00000272398 531.54 1357.23 CD24 molecule [Source:HGNC Symbol;Acc:HGNC:1645]
91. MAP1B ENSG00000131711 526.19 1343.57 microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
92. RPL12 ENSG00000197958 520.84 1329.91 ribosomal protein L12 [Source:HGNC Symbol;Acc:HGNC:10302]
93. RPL17 ENSG00000265681 520.84 1329.91 ribosomal protein L17 [Source:HGNC Symbol;Acc:HGNC:10307]
94. HSPA8 ENSG00000109971 511.92 1307.14 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
95. RPL18 ENSG00000063177 511.92 1307.14 ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:10310]
96. YBX1 ENSG00000065978 508.35 1298.02 Y-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8014]
97. RPLP2 ENSG00000177600 504.78 1288.91 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
98. RPL23A ENSG00000198242 497.65 1270.70 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
99. MARCKSL1 ENSG00000175130 495.86 1266.13 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
100. HNRNPH1 ENSG00000169045, ENSG00000284254 494.08 1261.58 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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