Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s6.

Sample reads: 391,649. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 8546.65 21822.22 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 4589.16 11717.54 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPL41 ENSG00000229117 3919.36 10007.33 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
4. RPS20 ENSG00000008988 2924.60 7467.40 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
5. RPL5 ENSG00000122406 2861.60 7306.54 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
6. ACTG1 ENSG00000184009 2438.82 6227.06 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
7. TUBA1B ENSG00000123416 2332.71 5956.13 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
8. RPL15 ENSG00000174748 2228.26 5689.43 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
9. RPL18A ENSG00000105640 1926.52 4919.00 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
10. RPS6 ENSG00000137154 1855.23 4736.97 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
11. RPL9 ENSG00000163682 1845.28 4711.57 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
12. VIM ENSG00000026025 1812.12 4626.90 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
13. PPIA ENSG00000196262 1793.89 4580.35 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
14. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1749.12 4466.04 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
15. RPS23 ENSG00000186468 1722.59 4398.30 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
16. RPL13AP20 ENSG00000234498 1643.01 4195.11 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
17. RPL10A ENSG00000198755 1641.36 4190.90 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
18. RPS5 ENSG00000083845 1634.72 4173.94 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
19. RPS12 ENSG00000112306 1598.25 4080.82 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
20. ACTB ENSG00000075624 1563.43 3991.92 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
21. RPS27A ENSG00000143947 1558.46 3979.23 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
22. RPL23 ENSG00000125691 1517.01 3873.39 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
23. RPL37 ENSG00000145592 1485.51 3792.96 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
24. RPLP1 ENSG00000137818 1445.72 3691.37 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
25. GAPDH ENSG00000111640 1437.43 3670.20 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
26. RPL31 ENSG00000071082 1410.90 3602.46 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
27. STMN1 ENSG00000117632 1366.14 3488.18 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
28. GNAS ENSG00000087460 1311.43 3348.48 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
29. RPS11 ENSG00000142534 1303.14 3327.32 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
30. RPL34 ENSG00000109475 1286.56 3284.98 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
31. RPS15A ENSG00000134419 1284.90 3280.74 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
32. RPS8 ENSG00000142937 1226.87 3132.58 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
33. RPS27 ENSG00000177954 1175.48 3001.36 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
34. RPL13 ENSG00000167526 1168.84 2984.41 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
35. RPL7A ENSG00000148303, ENSG00000280858 1117.45 2853.19 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
36. RPS2 ENSG00000140988 1062.74 2713.50 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
37. MDK ENSG00000110492 1003.05 2561.09 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
38. HSP90AB1 ENSG00000096384 993.10 2535.69 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
39. RPL37A ENSG00000197756 979.84 2501.83 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
40. RPS7 ENSG00000171863 979.84 2501.83 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
41. RPL6 ENSG00000089009 964.92 2463.74 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
42. MTRNR2L8 ENSG00000255823 954.97 2438.33 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
43. TPT1 ENSG00000133112 945.02 2412.93 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
44. RPS3A ENSG00000145425 905.23 2311.33 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
45. CKB ENSG00000166165 898.60 2294.40 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
46. RPL35 ENSG00000136942 895.28 2285.92 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
47. MTRNR2L1 ENSG00000256618 887.00 2264.78 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
48. RPS13 ENSG00000110700 883.68 2256.31 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
49. RPS21 ENSG00000171858 880.36 2247.83 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
50. RPL10 ENSG00000147403 877.05 2239.38 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
51. RPS25 ENSG00000118181, ENSG00000280831 873.73 2230.90 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
52. RPL3 ENSG00000100316 838.92 2142.02 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
53. NGFRAP1 NGFRAP1 830.63 2120.85
54. RPLP0 ENSG00000089157 809.07 2065.80 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
55. RBM3 ENSG00000102317 785.86 2006.54 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
56. HNRNPD ENSG00000138668 779.23 1989.61 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
57. UBB ENSG00000170315 774.26 1976.92 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
58. RPL11 ENSG00000142676 769.28 1964.21 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
59. RPS16 ENSG00000105193 767.62 1959.97 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
60. RPS28 ENSG00000233927 765.97 1955.76 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
61. HNRNPA1 ENSG00000135486 762.65 1947.28 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
62. HBE1 ENSG00000213931 760.99 1943.04 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
63. RPS29 ENSG00000213741 757.68 1934.59 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
64. H2AFZ ENSG00000164032 726.18 1854.16 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
65. RPS15 ENSG00000115268 716.23 1828.76 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
66. HNRNPC ENSG00000092199 688.04 1756.78 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
67. RPL4 ENSG00000174444 686.39 1752.56 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
68. NPM1 ENSG00000181163 684.73 1748.33 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
69. RPS14 ENSG00000164587 683.07 1744.09 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
70. NNAT ENSG00000053438 676.44 1727.16 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
71. MAP1B ENSG00000131711 673.12 1718.68 microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
72. MARCKS ENSG00000277443 669.81 1710.23 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
73. RPL26 ENSG00000161970 658.20 1680.59 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
74. RPL29 ENSG00000162244 649.91 1659.42 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
75. DDX17 ENSG00000100201 641.62 1638.25 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
76. ATP5G2 618.41 1578.99 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
77. CD24 ENSG00000272398 615.09 1570.51 CD24 molecule [Source:HGNC Symbol;Acc:HGNC:1645]
78. HNRNPH1 ENSG00000169045, ENSG00000284254 615.09 1570.51 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
79. RPL14 ENSG00000188846 610.12 1557.82 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
80. RPL32 ENSG00000144713 596.86 1523.97 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
81. SRP14 ENSG00000140319 593.54 1515.49 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
82. MORF4L1 ENSG00000185787 586.91 1498.56 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
83. RPL39 ENSG00000198918 583.59 1490.08 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
84. HNRNPA2B1 ENSG00000122566 578.62 1477.39 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:HGNC Symbol;Acc:HGNC:5033]
85. YBX1 ENSG00000065978 576.96 1473.16 Y-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8014]
86. EIF4G2 ENSG00000110321 570.33 1456.23 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
87. RAN ENSG00000132341 567.01 1447.75 RAN, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9846]
88. RPL35A ENSG00000182899 555.41 1418.13 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
89. TUBB3 ENSG00000258947 555.41 1418.13 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
90. CFL1 ENSG00000172757 548.78 1401.20 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
91. RPL38 ENSG00000172809 538.83 1375.80 ribosomal protein L38 [Source:HGNC Symbol;Acc:HGNC:10349]
92. SRSF2 ENSG00000161547 533.86 1363.11 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
93. RPL22 ENSG00000116251 530.54 1354.63 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
94. PFN2 ENSG00000070087 527.22 1346.15 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
95. MARCKSL1 ENSG00000175130 525.57 1341.94 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
96. RPS24 ENSG00000138326 523.91 1337.70 ribosomal protein S24 [Source:HGNC Symbol;Acc:HGNC:10411]
97. SRSF3 ENSG00000112081 520.59 1329.23 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
98. RPL17 ENSG00000265681 513.96 1312.30 ribosomal protein L17 [Source:HGNC Symbol;Acc:HGNC:10307]
99. ZIC1 ENSG00000152977 513.96 1312.30 Zic family member 1 [Source:HGNC Symbol;Acc:HGNC:12872]
100. SERF2 ENSG00000140264 508.99 1299.61 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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