Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s43.

Sample reads: 391,640. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 9115.44 23275.04 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 4152.02 10601.62 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. ACTB ENSG00000075624 2717.82 6939.58 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
4. RPS20 ENSG00000008988 2704.66 6905.98 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
5. ACTG1 ENSG00000184009 2557.00 6528.95 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
6. RPL41 ENSG00000229117 2469.28 6304.97 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
7. RPL5 ENSG00000122406 2288.00 5842.10 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
8. MDK ENSG00000110492 1874.26 4785.67 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
9. PPIA ENSG00000196262 1789.46 4569.14 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
10. RPL15 ENSG00000174748 1773.38 4528.08 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
11. TUBA1B ENSG00000123416 1725.14 4404.91 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
12. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1581.86 4039.06 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
13. RPS6 ENSG00000137154 1554.08 3968.13 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
14. RPS23 ENSG00000186468 1456.13 3718.03 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
15. GNAS ENSG00000087460 1397.65 3568.71 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
16. VIM ENSG00000026025 1350.87 3449.26 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
17. RPS5 ENSG00000083845 1299.70 3318.61 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
18. RPL9 ENSG00000163682 1274.85 3255.16 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
19. RPL18A ENSG00000105640 1244.14 3176.74 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
20. RPL13AP20 ENSG00000234498 1239.76 3165.56 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
21. MTRNR2L8 ENSG00000255823 1233.91 3150.62 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
22. RPL23 ENSG00000125691 1222.21 3120.75 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
23. RPL10A ENSG00000198755 1179.82 3012.51 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
24. HSP90AB1 ENSG00000096384 1178.36 3008.78 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
25. STMN1 ENSG00000117632 1153.50 2945.31 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
26. RPL37 ENSG00000145592 1144.73 2922.91 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
27. GAPDH ENSG00000111640 1135.96 2900.52 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
28. RPS12 ENSG00000112306 1135.96 2900.52 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
29. RPS8 ENSG00000142937 1096.48 2799.71 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
30. RPS27 ENSG00000177954 1080.40 2758.65 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
31. MTRNR2L1 ENSG00000256618 1073.09 2739.99 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
32. NGFRAP1 NGFRAP1 1054.09 2691.48
33. RPL34 ENSG00000109475 1033.62 2639.21 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
34. RPL31 ENSG00000071082 988.30 2523.49 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
35. RPS11 ENSG00000142534 978.06 2497.34 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
36. RPS27A ENSG00000143947 959.06 2448.83 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
37. TPT1 ENSG00000133112 953.21 2433.89 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
38. RPL13 ENSG00000167526 948.82 2422.68 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
39. RPS15A ENSG00000134419 926.89 2366.69 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
40. RPLP1 ENSG00000137818 907.89 2318.17 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
41. RPL37A ENSG00000197756 836.25 2135.25 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
42. CFL1 ENSG00000172757 834.79 2131.52 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
43. HNRNPC ENSG00000092199 817.25 2086.74 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
44. RPL35 ENSG00000136942 783.62 2000.87 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
45. SFRP1 ENSG00000104332 776.31 1982.20 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
46. HNRNPD ENSG00000138668 770.46 1967.26 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
47. COL3A1 ENSG00000168542 767.54 1959.81 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
48. RPL10 ENSG00000147403 744.15 1900.09 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
49. NNAT ENSG00000053438 733.91 1873.94 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
50. RPL7A ENSG00000148303, ENSG00000280858 733.91 1873.94 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
51. NPM1 ENSG00000181163 729.53 1862.76 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
52. RPL6 ENSG00000089009 728.07 1859.03 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
53. HNRNPH1 ENSG00000169045, ENSG00000284254 726.60 1855.27 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
54. RPS2 ENSG00000140988 716.37 1829.15 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
55. EIF4G2 ENSG00000110321 713.45 1821.70 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
56. RPL14 ENSG00000188846 709.06 1810.49 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
57. RPS3A ENSG00000145425 694.44 1773.16 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
58. UBB ENSG00000170315 692.98 1769.43 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
59. RPS25 ENSG00000118181, ENSG00000280831 691.52 1765.70 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
60. IFITM2 ENSG00000185201 685.67 1750.77 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
61. RPS16 ENSG00000105193 675.43 1724.62 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
62. DDX17 ENSG00000100201 669.59 1709.71 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
63. MARCKS ENSG00000277443 666.66 1702.23 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
64. RPS7 ENSG00000171863 666.66 1702.23 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
65. RPL3 ENSG00000100316 638.89 1631.32 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
66. RPS14 ENSG00000164587 622.80 1590.24 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
67. HSPA8 ENSG00000109971 612.57 1564.11 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
68. HMGN1 ENSG00000205581 597.95 1526.78 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
69. RPL11 ENSG00000142676 595.03 1519.33 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
70. RBM3 ENSG00000102317 593.56 1515.57 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
71. RPS15 ENSG00000115268 589.18 1504.39 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
72. RPS29 ENSG00000213741 583.33 1489.45 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
73. RPS21 ENSG00000171858 577.48 1474.52 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
74. PFN1 ENSG00000108518 571.63 1459.58 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
75. RPL26 ENSG00000161970 570.17 1455.85 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
76. HNRNPA1 ENSG00000135486 562.86 1437.19 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
77. TPM4 ENSG00000167460 557.01 1422.25 tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
78. IFITM3 ENSG00000142089 552.63 1411.07 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
79. H2AFZ ENSG00000164032 542.39 1384.92 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
80. RPLP0 ENSG00000089157 539.47 1377.46 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
81. SRSF2 ENSG00000161547 535.08 1366.25 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
82. HNRNPA2B1 ENSG00000122566 520.46 1328.92 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:HGNC Symbol;Acc:HGNC:5033]
83. RPL39 ENSG00000198918 520.46 1328.92 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
84. RPL4 ENSG00000174444 517.54 1321.47 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
85. RPS14P3 517.54 1321.47 ribosomal protein S14 pseudogene 3
86. H3F3B ENSG00000132475 516.08 1317.74 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
87. HMGA2 ENSG00000149948 514.62 1314.01 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
88. RPS28 ENSG00000233927 514.62 1314.01 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
89. SRSF3 ENSG00000112081 514.62 1314.01 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
90. RPL32 ENSG00000144713 508.77 1299.07 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
91. MARCKSL1 ENSG00000175130 504.38 1287.87 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
92. RPL35A ENSG00000182899 504.38 1287.87 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
93. CD24 ENSG00000272398 501.46 1280.41 CD24 molecule [Source:HGNC Symbol;Acc:HGNC:1645]
94. RPL29 ENSG00000162244 482.45 1231.87 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
95. PBX1 ENSG00000185630 480.99 1228.14 PBX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8632]
96. RPL38 ENSG00000172809 479.53 1224.41 ribosomal protein L38 [Source:HGNC Symbol;Acc:HGNC:10349]
97. SERF2 ENSG00000140264 478.07 1220.69 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
98. MORF4L1 ENSG00000185787 476.61 1216.96 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
99. RPS13 ENSG00000110700 475.14 1213.21 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
100. PFN2 ENSG00000070087 470.76 1202.02 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA