Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s42.

Sample reads: 391,656. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 8905.32 22737.59 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 4317.96 11024.87 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPL41 ENSG00000229117 3205.25 8183.83 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
4. ACTB ENSG00000075624 2400.71 6129.63 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
5. RPS20 ENSG00000008988 2321.36 5927.03 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
6. RPL5 ENSG00000122406 2317.67 5917.61 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
7. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2234.63 5705.59 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
8. ACTG1 ENSG00000184009 2158.98 5512.44 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
9. RPL15 ENSG00000174748 1891.41 4829.26 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
10. RPS6 ENSG00000137154 1891.41 4829.26 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
11. PPIA ENSG00000196262 1623.85 4146.11 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
12. RPL18A ENSG00000105640 1614.62 4122.54 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
13. TUBA1B ENSG00000123416 1538.96 3929.36 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
14. RPS5 ENSG00000083845 1520.51 3882.26 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
15. RPL9 ENSG00000163682 1511.28 3858.69 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
16. GNAS ENSG00000087460 1492.83 3811.58 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
17. MDK ENSG00000110492 1391.34 3552.45 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
18. RPS12 ENSG00000112306 1311.99 3349.85 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
19. RPL13AP20 ENSG00000234498 1288.01 3288.62 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
20. RPL37 ENSG00000145592 1284.32 3279.20 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
21. STMN1 ENSG00000117632 1284.32 3279.20 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
22. RPL34 ENSG00000109475 1256.64 3208.53 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
23. RPL10A ENSG00000198755 1254.79 3203.80 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
24. GAPDH ENSG00000111640 1249.26 3189.68 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
25. RPL23 ENSG00000125691 1227.11 3133.13 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
26. RPS27A ENSG00000143947 1225.27 3128.43 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
27. HSP90AB1 ENSG00000096384 1223.42 3123.71 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
28. VIM ENSG00000026025 1206.81 3081.30 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
29. NGFRAP1 NGFRAP1 1182.82 3020.05
30. MTRNR2L8 ENSG00000255823 1171.75 2991.78 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
31. RPL31 ENSG00000071082 1169.91 2987.08 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
32. RPS23 ENSG00000186468 1166.22 2977.66 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
33. MTRNR2L1 ENSG00000256618 1125.62 2874.00 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
34. RPLP1 ENSG00000137818 1048.12 2676.12 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
35. RPS8 ENSG00000142937 1009.37 2577.18 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
36. TPT1 ENSG00000133112 983.53 2511.21 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
37. RPS11 ENSG00000142534 981.69 2506.51 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
38. RPL13 ENSG00000167526 970.62 2478.24 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
39. RPL35 ENSG00000136942 966.93 2468.82 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
40. RPS15A ENSG00000134419 959.55 2449.98 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
41. RPS2 ENSG00000140988 931.87 2379.31 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
42. UBB ENSG00000170315 911.57 2327.47 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
43. RPL3 ENSG00000100316 902.34 2303.91 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
44. RPS27 ENSG00000177954 878.35 2242.66 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
45. RPL11 ENSG00000142676 843.29 2153.14 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
46. RPL7A ENSG00000148303, ENSG00000280858 834.07 2129.60 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
47. RPS3A ENSG00000145425 815.61 2082.46 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
48. RPL10 ENSG00000147403 800.85 2044.78 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
49. RPL37A ENSG00000197756 782.40 1997.67 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
50. RPL6 ENSG00000089009 782.40 1997.67 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
51. NPM1 ENSG00000181163 780.55 1992.95 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
52. RPL29 ENSG00000162244 758.41 1936.42 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
53. CFL1 ENSG00000172757 745.49 1903.43 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
54. EIF4G2 ENSG00000110321 745.49 1903.43 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
55. HNRNPD ENSG00000138668 743.65 1898.73 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
56. RPS7 ENSG00000171863 721.50 1842.18 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
57. RPL14 ENSG00000188846 712.28 1818.64 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
58. HNRNPC ENSG00000092199 704.90 1799.79 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
59. RPS14 ENSG00000164587 695.67 1776.23 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
60. RPS21 ENSG00000171858 691.98 1766.80 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
61. RPS15 ENSG00000115268 684.60 1747.96 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
62. HNRNPH1 ENSG00000169045, ENSG00000284254 680.91 1738.54 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
63. DDX17 ENSG00000100201 667.99 1705.55 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
64. RPS16 ENSG00000105193 656.92 1677.29 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
65. RPS13 ENSG00000110700 655.07 1672.56 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
66. MARCKS ENSG00000277443 653.23 1667.87 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
67. IFITM2 ENSG00000185201 642.16 1639.60 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
68. NNAT ENSG00000053438 642.16 1639.60 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
69. IFITM3 ENSG00000142089 638.47 1630.18 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
70. RPS25 ENSG00000118181, ENSG00000280831 631.09 1611.34 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
71. RPLP0 ENSG00000089157 627.40 1601.91 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
72. HSPA8 ENSG00000109971 621.86 1587.77 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
73. RPL32 ENSG00000144713 603.41 1540.66 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
74. RPL26 ENSG00000161970 601.56 1535.94 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
75. PFN1 ENSG00000108518 596.03 1521.82 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
76. RPS28 ENSG00000233927 596.03 1521.82 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
77. TPM4 ENSG00000167460 590.49 1507.67 tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
78. HNRNPA1 ENSG00000135486 584.95 1493.53 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
79. SOX4 ENSG00000124766 583.11 1488.83 SRY-box 4 [Source:HGNC Symbol;Acc:HGNC:11200]
80. COL3A1 ENSG00000168542 579.42 1479.41 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
81. ATP5G2 577.57 1474.69 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
82. RBM3 ENSG00000102317 573.88 1465.26 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
83. HMGN1 ENSG00000205581 572.04 1460.57 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
84. H2AFZ ENSG00000164032 559.12 1427.58 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
85. SFRP1 ENSG00000104332 559.12 1427.58 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
86. SRSF2 ENSG00000161547 559.12 1427.58 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
87. RPL4 ENSG00000174444 555.43 1418.16 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
88. RPL39 ENSG00000198918 551.74 1408.74 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
89. PBX1 ENSG00000185630 549.89 1404.01 PBX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8632]
90. SRSF3 ENSG00000112081 548.05 1399.31 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
91. USP22 ENSG00000124422 527.75 1347.48 ubiquitin specific peptidase 22 [Source:HGNC Symbol;Acc:HGNC:12621]
92. HNRNPA2B1 ENSG00000122566 524.06 1338.06 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:HGNC Symbol;Acc:HGNC:5033]
93. RPL38 ENSG00000172809 522.21 1333.34 ribosomal protein L38 [Source:HGNC Symbol;Acc:HGNC:10349]
94. ENO1 ENSG00000074800 518.52 1323.92 enolase 1 [Source:HGNC Symbol;Acc:HGNC:3350]
95. RPL35A ENSG00000182899 518.52 1323.92 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
96. RPS29 ENSG00000213741 518.52 1323.92 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
97. RPS14P3 512.99 1309.80 ribosomal protein S14 pseudogene 3
98. RPS19 ENSG00000105372 512.99 1309.80 ribosomal protein S19 [Source:HGNC Symbol;Acc:HGNC:10402]
99. SERF2 ENSG00000140264 503.76 1286.23 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
100. HMGA2 ENSG00000149948 501.92 1281.53 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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