Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s41.

Sample reads: 391,650. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 8427.06 21516.80 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. RPS20 ENSG00000008988 4230.13 10800.78 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
3. EEF1A1 ENSG00000156508 3931.34 10037.88 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
4. RPL41 ENSG00000229117 3162.22 8074.09 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
5. RPL5 ENSG00000122406 2481.64 6336.37 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
6. ACTG1 ENSG00000184009 2271.38 5799.51 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
7. TUBA1B ENSG00000123416 2210.51 5644.09 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
8. ACTB ENSG00000075624 2204.98 5629.97 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
9. PPIA ENSG00000196262 1933.85 4937.70 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
10. RPL15 ENSG00000174748 1803.82 4605.69 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
11. MDK ENSG00000110492 1778.92 4542.11 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
12. RPS5 ENSG00000083845 1718.06 4386.72 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
13. RPS23 ENSG00000186468 1693.16 4323.14 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
14. RPS12 ENSG00000112306 1668.26 4259.57 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
15. RPL18A ENSG00000105640 1665.49 4252.49 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
16. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1662.73 4245.45 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
17. RPL13AP20 ENSG00000234498 1657.19 4231.30 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
18. RPL37 ENSG00000145592 1618.46 4132.41 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
19. RPS6 ENSG00000137154 1571.43 4012.33 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
20. RPL23 ENSG00000125691 1532.70 3913.44 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
21. RPL9 ENSG00000163682 1510.56 3856.91 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
22. RPL10A ENSG00000198755 1471.83 3758.02 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
23. GNAS ENSG00000087460 1413.73 3609.67 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
24. STMN1 ENSG00000117632 1369.47 3496.67 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
25. RPS11 ENSG00000142534 1347.33 3440.14 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
26. RPS27A ENSG00000143947 1330.73 3397.75 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
27. GAPDH ENSG00000111640 1314.13 3355.37 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
28. RPS27 ENSG00000177954 1228.37 3136.40 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
29. HSP90AB1 ENSG00000096384 1214.54 3101.08 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
30. RPL34 ENSG00000109475 1211.77 3094.01 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
31. RPL14 ENSG00000188846 1175.80 3002.17 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
32. RPL31 ENSG00000071082 1173.04 2995.12 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
33. MTRNR2L8 ENSG00000255823 1167.50 2980.98 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
34. NGFRAP1 NGFRAP1 1084.51 2769.08
35. RPL13 ENSG00000167526 1067.91 2726.69 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
36. MTRNR2L1 ENSG00000256618 1009.81 2578.35 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
37. RPLP1 ENSG00000137818 998.74 2550.08 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
38. CFL1 ENSG00000172757 995.98 2543.03 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
39. RPL37A ENSG00000197756 962.78 2458.26 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
40. RPL35 ENSG00000136942 943.41 2408.81 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
41. NNAT ENSG00000053438 940.64 2401.73 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
42. RPS15A ENSG00000134419 935.11 2387.61 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
43. RPL6 ENSG00000089009 910.21 2324.04 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
44. RPS8 ENSG00000142937 896.38 2288.73 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
45. IFITM2 ENSG00000185201 888.08 2267.53 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
46. TPT1 ENSG00000133112 874.24 2232.20 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
47. RPS25 ENSG00000118181, ENSG00000280831 857.65 2189.84 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
48. VIM ENSG00000026025 821.68 2097.99 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
49. HNRNPC ENSG00000092199 799.55 2041.49 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
50. RPS15 ENSG00000115268 799.55 2041.49 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
51. HNRNPD ENSG00000138668 794.01 2027.34 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
52. NPM1 ENSG00000181163 785.71 2006.15 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
53. RPL10 ENSG00000147403 774.65 1977.91 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
54. RPL7A ENSG00000148303, ENSG00000280858 774.65 1977.91 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
55. UBB ENSG00000170315 774.65 1977.91 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
56. PBX1 ENSG00000185630 763.58 1949.65 PBX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8632]
57. RPS28 ENSG00000233927 749.75 1914.34 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
58. RPS16 ENSG00000105193 746.98 1907.26 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
59. HSPA8 ENSG00000109971 741.45 1893.14 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
60. RPL3 ENSG00000100316 735.92 1879.02 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
61. RPS7 ENSG00000171863 727.62 1857.83 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
62. RPS3A ENSG00000145425 713.78 1822.49 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
63. RPS21 ENSG00000171858 705.48 1801.30 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
64. RPS29 ENSG00000213741 697.18 1780.11 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
65. EIF4G2 ENSG00000110321 691.65 1765.99 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
66. RPS14 ENSG00000164587 691.65 1765.99 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
67. RPS2 ENSG00000140988 675.05 1723.60 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
68. IFITM3 ENSG00000142089 655.68 1674.15 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
69. RPL39 ENSG00000198918 644.62 1645.91 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
70. HNRNPH1 ENSG00000169045, ENSG00000284254 616.95 1575.26 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
71. RPL11 ENSG00000142676 608.65 1554.07 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
72. MARCKS ENSG00000277443 603.12 1539.95 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
73. RPL4 ENSG00000174444 603.12 1539.95 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
74. RPLP0 ENSG00000089157 594.82 1518.75 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
75. RPL29 ENSG00000162244 586.52 1497.56 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
76. ENO1 ENSG00000074800 583.75 1490.49 enolase 1 [Source:HGNC Symbol;Acc:HGNC:3350]
77. H2AFZ ENSG00000164032 583.75 1490.49 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
78. RPL32 ENSG00000144713 583.75 1490.49 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
79. RPL38 ENSG00000172809 575.45 1469.30 ribosomal protein L38 [Source:HGNC Symbol;Acc:HGNC:10349]
80. DDX17 ENSG00000100201 569.92 1455.18 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
81. UBA52 ENSG00000221983 567.15 1448.10 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
82. HMGN1 ENSG00000205581 564.39 1441.06 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
83. RPL35A ENSG00000182899 564.39 1441.06 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
84. PFN1 ENSG00000108518 561.62 1433.98 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
85. RBM3 ENSG00000102317 556.09 1419.86 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
86. PFN2 ENSG00000070087 553.32 1412.79 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
87. RPS13 ENSG00000110700 550.55 1405.72 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
88. SFRP1 ENSG00000104332 547.79 1398.67 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
89. TPM4 ENSG00000167460 536.72 1370.41 tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
90. MARCKSL1 ENSG00000175130 528.42 1349.21 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
91. HMGA2 ENSG00000149948 522.89 1335.09 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
92. COL3A1 ENSG00000168542 517.35 1320.95 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
93. RPS14P3 517.35 1320.95 ribosomal protein S14 pseudogene 3
94. HNRNPA1 ENSG00000135486 511.82 1306.83 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
95. RPL26 ENSG00000161970 500.75 1278.56 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
96. RPS19 ENSG00000105372 500.75 1278.56 ribosomal protein S19 [Source:HGNC Symbol;Acc:HGNC:10402]
97. RPL23A ENSG00000198242 495.22 1264.44 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
98. SRP14 ENSG00000140319 495.22 1264.44 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
99. SERF2 ENSG00000140264 486.92 1243.25 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
100. CRABP2 ENSG00000143320 484.15 1236.18 cellular retinoic acid binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2339]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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