Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s4.

Sample reads: 391,652. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 8078.87 20627.70 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 4632.77 11828.81 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPL41 ENSG00000229117 3623.57 9252.03 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
4. RPS20 ENSG00000008988 2534.91 6472.36 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
5. RPL5 ENSG00000122406 2505.77 6397.96 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
6. ACTG1 ENSG00000184009 2389.23 6100.40 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
7. TUBA1B ENSG00000123416 2097.86 5356.45 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
8. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2023.69 5167.07 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
9. PPIA ENSG00000196262 1981.31 5058.86 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
10. RPL15 ENSG00000174748 1968.07 5025.05 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
11. RPS6 ENSG00000137154 1925.68 4916.82 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
12. RPL18A ENSG00000105640 1803.84 4605.73 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
13. VIM ENSG00000026025 1737.62 4436.65 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
14. ACTB ENSG00000075624 1695.24 4328.44 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
15. RPL13AP20 ENSG00000234498 1594.58 4071.43 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
16. GAPDH ENSG00000111640 1578.69 4030.85 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
17. RPL9 ENSG00000163682 1504.52 3841.48 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
18. RPS23 ENSG00000186468 1499.23 3827.97 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
19. RPS27A ENSG00000143947 1483.33 3787.37 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
20. RPL23 ENSG00000125691 1443.60 3685.93 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
21. STMN1 ENSG00000117632 1409.17 3598.02 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
22. RPS5 ENSG00000083845 1406.52 3591.25 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
23. RPL34 ENSG00000109475 1382.68 3530.38 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
24. RPL10A ENSG00000198755 1380.03 3523.62 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
25. RPS15A ENSG00000134419 1372.08 3503.32 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
26. RPL37 ENSG00000145592 1353.54 3455.98 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
27. RPS12 ENSG00000112306 1345.60 3435.71 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
28. RPS27 ENSG00000177954 1327.05 3388.34 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
29. MTRNR2L8 ENSG00000255823 1250.24 3192.23 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
30. RPS11 ENSG00000142534 1247.59 3185.46 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
31. CKB ENSG00000166165 1239.64 3165.16 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
32. RPL13 ENSG00000167526 1197.26 3056.95 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
33. RPL31 ENSG00000071082 1136.34 2901.41 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
34. RPL7A ENSG00000148303, ENSG00000280858 1093.96 2793.20 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
35. GNAS ENSG00000087460 1070.12 2732.33 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
36. MDK ENSG00000110492 1054.23 2691.76 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
37. RPS2 ENSG00000140988 1043.63 2664.69 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
38. MTRNR2L1 ENSG00000256618 1011.85 2583.55 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
39. RPLP0 ENSG00000089157 998.60 2549.72 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
40. RPS13 ENSG00000110700 998.60 2549.72 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
41. RPL10 ENSG00000147403 985.36 2515.91 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
42. RPS8 ENSG00000142937 964.17 2461.81 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
43. TUBB3 ENSG00000258947 948.27 2421.21 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
44. TPT1 ENSG00000133112 937.68 2394.17 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
45. RPS28 ENSG00000233927 929.73 2373.87 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
46. RPL14 ENSG00000188846 913.84 2333.30 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
47. RPL6 ENSG00000089009 911.19 2326.53 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
48. RPS16 ENSG00000105193 900.60 2299.49 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
49. RPLP1 ENSG00000137818 887.35 2265.66 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
50. HSP90AB1 ENSG00000096384 863.51 2204.79 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
51. NGFRAP1 NGFRAP1 855.57 2184.52
52. RPS15 ENSG00000115268 850.27 2170.99 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
53. RPS25 ENSG00000118181, ENSG00000280831 834.37 2130.39 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
54. RPS14 ENSG00000164587 818.48 2089.82 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
55. RPS3A ENSG00000145425 810.54 2069.54 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
56. RPL37A ENSG00000197756 807.89 2062.78 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
57. RPL35 ENSG00000136942 805.24 2056.01 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
58. HNRNPC ENSG00000092199 768.15 1961.31 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
59. RBM3 ENSG00000102317 760.21 1941.04 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
60. MARCKS ENSG00000277443 744.32 1900.46 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
61. RPL3 ENSG00000100316 739.02 1886.93 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
62. RPL11 ENSG00000142676 731.07 1866.63 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
63. RPS21 ENSG00000171858 728.42 1859.87 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
64. HNRNPD ENSG00000138668 720.48 1839.59 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
65. RPS7 ENSG00000171863 696.64 1778.72 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
66. EIF4G2 ENSG00000110321 688.69 1758.43 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
67. MAP1B ENSG00000131711 683.39 1744.89 microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
68. H2AFZ ENSG00000164032 675.45 1724.62 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
69. RPL29 ENSG00000162244 670.15 1711.09 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
70. NNAT ENSG00000053438 659.55 1684.02 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
71. ATP5G2 648.96 1656.98 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
72. HNRNPA1 ENSG00000135486 641.01 1636.68 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
73. RPL32 ENSG00000144713 627.77 1602.88 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
74. RPS29 ENSG00000213741 614.52 1569.05 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
75. NPM1 ENSG00000181163 611.87 1562.28 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
76. MARCKSL1 ENSG00000175130 609.23 1555.54 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
77. PCBP2 ENSG00000197111 609.23 1555.54 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
78. RPL35A ENSG00000182899 609.23 1555.54 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
79. RPL39 ENSG00000198918 606.58 1548.77 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
80. SRSF2 ENSG00000161547 595.98 1521.71 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
81. DDX17 ENSG00000100201 593.33 1514.94 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
82. RPL4 ENSG00000174444 590.68 1508.18 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
83. UBB ENSG00000170315 588.04 1501.44 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
84. CFL1 ENSG00000172757 585.39 1494.67 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
85. YWHAE ENSG00000108953, ENSG00000274474 572.14 1460.84 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon [Source:HGNC Symbol;Acc:HGNC:12851]
86. SERF2 ENSG00000140264 569.49 1454.07 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
87. RPS19 ENSG00000105372 566.85 1447.33 ribosomal protein S19 [Source:HGNC Symbol;Acc:HGNC:10402]
88. PFN2 ENSG00000070087 561.55 1433.80 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
89. RPL26 ENSG00000161970 550.95 1406.74 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
90. HNRNPH1 ENSG00000169045, ENSG00000284254 535.06 1366.16 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
91. YBX1 ENSG00000065978 527.11 1345.86 Y-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8014]
92. XRCC5 ENSG00000079246 524.46 1339.10 X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
93. ZIC1 ENSG00000152977 521.82 1332.36 Zic family member 1 [Source:HGNC Symbol;Acc:HGNC:12872]
94. SRSF3 ENSG00000112081 519.17 1325.59 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
95. RPL18 ENSG00000063177 511.22 1305.29 ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:10310]
96. PFN1 ENSG00000108518 508.57 1298.53 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
97. RPL12 ENSG00000197958 505.92 1291.76 ribosomal protein L12 [Source:HGNC Symbol;Acc:HGNC:10302]
98. RPS24 ENSG00000138326 500.62 1278.23 ribosomal protein S24 [Source:HGNC Symbol;Acc:HGNC:10411]
99. SRP14 ENSG00000140319 500.62 1278.23 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
100. CD24 ENSG00000272398 497.98 1271.49 CD24 molecule [Source:HGNC Symbol;Acc:HGNC:1645]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA