Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s38.

Sample reads: 391,636. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 8582.13 21913.53 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 4144.40 10582.27 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPL41 ENSG00000229117 3910.52 9985.09 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
4. RPL5 ENSG00000122406 3026.54 7727.94 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
5. ACTG1 ENSG00000184009 2402.20 6133.76 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
6. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2342.74 5981.93 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
7. ACTB ENSG00000075624 2100.94 5364.52 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
8. TUBA1B ENSG00000123416 2100.94 5364.52 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
9. RPS20 ENSG00000008988 2085.08 5324.02 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
10. PPIA ENSG00000196262 2015.71 5146.90 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
11. RPS6 ENSG00000137154 1664.89 4251.12 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
12. RPL15 ENSG00000174748 1637.15 4180.28 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
13. RPL18A ENSG00000105640 1597.50 4079.04 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
14. GNAS ENSG00000087460 1540.03 3932.30 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
15. GAPDH ENSG00000111640 1415.16 3613.46 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
16. RPS5 ENSG00000083845 1411.20 3603.35 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
17. RPL13AP20 ENSG00000234498 1369.57 3497.05 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
18. RPL9 ENSG00000163682 1343.81 3431.27 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
19. MDK ENSG00000110492 1302.18 3324.97 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
20. STMN1 ENSG00000117632 1300.20 3319.92 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
21. RPS12 ENSG00000112306 1284.35 3279.45 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
22. RPS27A ENSG00000143947 1226.87 3132.68 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
23. TPT1 ENSG00000133112 1203.08 3071.93 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
24. RPL23 ENSG00000125691 1183.26 3021.33 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
25. NGFRAP1 NGFRAP1 1159.48 2960.61
26. RPL10A ENSG00000198755 1157.50 2955.55 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
27. RPL34 ENSG00000109475 1153.53 2945.41 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
28. MTRNR2L1 ENSG00000256618 1109.93 2834.09 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
29. RPL37 ENSG00000145592 1103.98 2818.89 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
30. HSP90AB1 ENSG00000096384 1100.02 2808.78 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
31. RPS23 ENSG00000186468 1100.02 2808.78 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
32. RPL14 ENSG00000188846 1062.36 2712.62 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
33. MTRNR2L8 ENSG00000255823 1056.41 2697.43 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
34. RPS8 ENSG00000142937 1052.45 2687.32 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
35. VIM ENSG00000026025 1042.54 2662.01 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
36. NPM1 ENSG00000181163 1004.88 2565.85 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
37. RPL31 ENSG00000071082 992.99 2535.49 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
38. RPLP1 ENSG00000137818 969.21 2474.77 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
39. RPS11 ENSG00000142534 935.51 2388.72 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
40. RPS3A ENSG00000145425 880.02 2247.04 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
41. RPS15A ENSG00000134419 878.03 2241.95 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
42. RPS14 ENSG00000164587 840.37 2145.79 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
43. HNRNPC ENSG00000092199 834.43 2130.63 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
44. RPL3 ENSG00000100316 824.52 2105.32 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
45. RPL13 ENSG00000167526 822.54 2100.27 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
46. RPS7 ENSG00000171863 816.59 2085.07 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
47. RPL10 ENSG00000147403 810.64 2069.88 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
48. RPL35 ENSG00000136942 794.79 2029.41 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
49. RPL6 ENSG00000089009 792.81 2024.35 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
50. RPS2 ENSG00000140988 786.86 2009.16 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
51. RPS28 ENSG00000233927 776.95 1983.86 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
52. CFL1 ENSG00000172757 774.97 1978.80 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
53. HSPA8 ENSG00000109971 761.09 1943.36 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
54. EIF4G2 ENSG00000110321 759.11 1938.30 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
55. UBB ENSG00000170315 759.11 1938.30 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
56. RPL11 ENSG00000142676 745.24 1902.89 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
57. HNRNPD ENSG00000138668 743.26 1897.83 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
58. IFITM2 ENSG00000185201 741.27 1892.75 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
59. RPL7A ENSG00000148303, ENSG00000280858 739.29 1887.70 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
60. HMGN1 ENSG00000205581 711.54 1816.84 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
61. MARCKS ENSG00000277443 705.60 1801.67 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
62. RPS13 ENSG00000110700 701.63 1791.54 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
63. RPS27 ENSG00000177954 701.63 1791.54 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
64. RPLP0 ENSG00000089157 689.74 1761.18 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
65. SOX4 ENSG00000124766 687.76 1756.12 SRY-box 4 [Source:HGNC Symbol;Acc:HGNC:11200]
66. TPM4 ENSG00000167460 681.81 1740.93 tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
67. RPS16 ENSG00000105193 679.83 1735.87 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
68. RPL37A ENSG00000197756 671.90 1715.62 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
69. RPL29 ENSG00000162244 663.98 1695.40 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
70. RPS21 ENSG00000171858 646.14 1649.85 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
71. RBM3 ENSG00000102317 640.19 1634.66 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
72. RPS25 ENSG00000118181, ENSG00000280831 620.37 1584.05 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
73. PFN1 ENSG00000108518 618.39 1578.99 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
74. HNRNPH1 ENSG00000169045, ENSG00000284254 616.41 1573.94 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
75. ENO1 ENSG00000074800 608.48 1553.69 enolase 1 [Source:HGNC Symbol;Acc:HGNC:3350]
76. IFITM3 ENSG00000142089 600.55 1533.44 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
77. NNAT ENSG00000053438 598.57 1528.38 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
78. RPL32 ENSG00000144713 588.66 1503.08 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
79. HBE1 ENSG00000213931 578.75 1477.78 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
80. PBX1 ENSG00000185630 576.77 1472.72 PBX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8632]
81. RPS15 ENSG00000115268 572.80 1462.58 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
82. SRSF2 ENSG00000161547 570.82 1457.53 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
83. HNRNPA1 ENSG00000135486 560.91 1432.22 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
84. DDX17 ENSG00000100201 558.93 1427.17 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
85. HMGA2 ENSG00000149948 543.07 1386.67 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
86. ACTC1 ENSG00000159251 541.09 1381.61 actin, alpha, cardiac muscle 1 [Source:HGNC Symbol;Acc:HGNC:143]
87. H2AFZ ENSG00000164032 541.09 1381.61 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
88. SET ENSG00000119335 533.16 1361.37 SET nuclear proto-oncogene [Source:HGNC Symbol;Acc:HGNC:10760]
89. COL3A1 ENSG00000168542 519.29 1325.95 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
90. EEF1B2 ENSG00000114942, ENSG00000283391 517.31 1320.89 eukaryotic translation elongation factor 1 beta 2 [Source:HGNC Symbol;Acc:HGNC:3208]
91. ATP5G2 515.32 1315.81 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
92. RPL39 ENSG00000198918 511.36 1305.70 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
93. RPL35A ENSG00000182899 505.41 1290.51 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
94. RPS29 ENSG00000213741 501.45 1280.40 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
95. HMGB1 ENSG00000189403 499.47 1275.34 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
96. MARCKSL1 ENSG00000175130 499.47 1275.34 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
97. RPL26 ENSG00000161970 499.47 1275.34 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
98. RPL27A ENSG00000166441 499.47 1275.34 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
99. SRSF3 ENSG00000112081 499.47 1275.34 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
100. RPS19 ENSG00000105372 483.61 1234.85 ribosomal protein S19 [Source:HGNC Symbol;Acc:HGNC:10402]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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