Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s35.

Sample reads: 391,651. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 9877.81 25220.98 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 4549.76 11616.89 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPL41 ENSG00000229117 3379.41 8628.64 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
4. ACTG1 ENSG00000184009 2463.60 6290.30 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
5. ACTB ENSG00000075624 2402.16 6133.43 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
6. RPS20 ENSG00000008988 2214.90 5655.30 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
7. TUBA1B ENSG00000123416 2179.79 5565.65 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
8. RPL5 ENSG00000122406 2053.98 5244.42 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
9. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2027.64 5177.17 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
10. PPIA ENSG00000196262 1960.35 5005.35 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
11. RPL15 ENSG00000174748 1919.39 4900.77 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
12. RPS6 ENSG00000137154 1758.46 4489.87 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
13. MDK ENSG00000110492 1588.76 4056.58 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
14. GAPDH ENSG00000111640 1582.91 4041.64 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
15. RPL9 ENSG00000163682 1539.02 3929.57 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
16. RPL37 ENSG00000145592 1533.17 3914.64 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
17. RPS12 ENSG00000112306 1506.83 3847.38 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
18. GNAS ENSG00000087460 1474.65 3765.22 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
19. RPL18A ENSG00000105640 1407.35 3593.38 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
20. RPS5 ENSG00000083845 1331.28 3399.15 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
21. RPL23 ENSG00000125691 1328.36 3391.70 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
22. HSP90AB1 ENSG00000096384 1293.24 3302.02 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
23. RPS23 ENSG00000186468 1287.39 3287.09 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
24. RPL34 ENSG00000109475 1220.10 3115.28 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
25. RPS15A ENSG00000134419 1196.69 3055.50 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
26. RPL13AP20 ENSG00000234498 1155.73 2950.92 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
27. RPS27A ENSG00000143947 1126.47 2876.21 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
28. RPL31 ENSG00000071082 1123.54 2868.73 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
29. STMN1 ENSG00000117632 1120.62 2861.27 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
30. RPS11 ENSG00000142534 1117.69 2853.79 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
31. RPL10A ENSG00000198755 1059.17 2704.37 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
32. RPLP1 ENSG00000137818 1038.69 2652.08 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
33. RPL14 ENSG00000188846 1029.91 2629.67 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
34. NGFRAP1 NGFRAP1 1000.66 2554.98
35. RPL13 ENSG00000167526 997.73 2547.50 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
36. MTRNR2L8 ENSG00000255823 994.80 2540.02 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
37. MTRNR2L1 ENSG00000256618 980.17 2502.66 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
38. IFITM2 ENSG00000185201 971.40 2480.27 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
39. RPS8 ENSG00000142937 968.47 2472.79 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
40. RPS27 ENSG00000177954 918.73 2345.79 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
41. VIM ENSG00000026025 909.95 2323.37 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
42. NPM1 ENSG00000181163 904.10 2308.44 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
43. TPT1 ENSG00000133112 895.32 2286.02 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
44. RPS16 ENSG00000105193 842.66 2151.56 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
45. RPL11 ENSG00000142676 822.18 2099.27 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
46. RPS2 ENSG00000140988 822.18 2099.27 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
47. RPLP0 ENSG00000089157 807.55 2061.91 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
48. CFL1 ENSG00000172757 787.06 2009.60 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
49. RPL35 ENSG00000136942 778.29 1987.20 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
50. RPS25 ENSG00000118181, ENSG00000280831 778.29 1987.20 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
51. RPL10 ENSG00000147403 772.44 1972.27 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
52. HNRNPD ENSG00000138668 769.51 1964.79 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
53. RPS14 ENSG00000164587 766.58 1957.31 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
54. RPS3A ENSG00000145425 763.66 1949.85 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
55. RPL7A ENSG00000148303, ENSG00000280858 757.81 1934.91 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
56. EIF4G2 ENSG00000110321 751.95 1919.95 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
57. HNRNPA1 ENSG00000135486 751.95 1919.95 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
58. UBB ENSG00000170315 749.03 1912.50 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
59. HMGA2 ENSG00000149948 740.25 1890.08 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
60. RPL37A ENSG00000197756 740.25 1890.08 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
61. RPL3 ENSG00000100316 731.47 1867.66 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
62. HNRNPC ENSG00000092199 725.62 1852.72 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
63. RPS15 ENSG00000115268 716.84 1830.30 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
64. HNRNPH1 ENSG00000169045, ENSG00000284254 705.14 1800.43 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
65. RPL6 ENSG00000089009 705.14 1800.43 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
66. RBM3 ENSG00000102317 693.44 1770.56 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
67. PFN1 ENSG00000108518 684.66 1748.14 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
68. HMGN1 ENSG00000205581 678.81 1733.20 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
69. ATP5G2 658.33 1680.91 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
70. RPS21 ENSG00000171858 658.33 1680.91 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
71. ENO1 ENSG00000074800 655.40 1673.43 enolase 1 [Source:HGNC Symbol;Acc:HGNC:3350]
72. HSPA8 ENSG00000109971 646.62 1651.01 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
73. DDX17 ENSG00000100201 643.70 1643.56 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
74. RPL18 ENSG00000063177 643.70 1643.56 ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:10310]
75. RPL26 ENSG00000161970 629.07 1606.20 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
76. RPS28 ENSG00000233927 629.07 1606.20 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
77. H2AFZ ENSG00000164032 611.51 1561.37 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
78. RPL29 ENSG00000162244 611.51 1561.37 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
79. RPS13 ENSG00000110700 608.59 1553.91 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
80. NNAT ENSG00000053438 599.81 1531.49 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
81. RPL39 ENSG00000198918 591.03 1509.07 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
82. RPS7 ENSG00000171863 588.10 1501.59 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
83. MARCKS ENSG00000277443 579.33 1479.20 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
84. SOX4 ENSG00000124766 579.33 1479.20 SRY-box 4 [Source:HGNC Symbol;Acc:HGNC:11200]
85. SRSF3 ENSG00000112081 552.99 1411.95 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
86. SRP14 ENSG00000140319 538.36 1374.59 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
87. H3F3B ENSG00000132475 529.59 1352.20 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
88. RPL4 ENSG00000174444 529.59 1352.20 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
89. XRCC5 ENSG00000079246 529.59 1352.20 X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
90. TPM4 ENSG00000167460 520.81 1329.78 tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
91. EEF1B2 ENSG00000114942, ENSG00000283391 512.03 1307.36 eukaryotic translation elongation factor 1 beta 2 [Source:HGNC Symbol;Acc:HGNC:3208]
92. PFN2 ENSG00000070087 512.03 1307.36 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
93. RPS29 ENSG00000213741 512.03 1307.36 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
94. SRSF2 ENSG00000161547 509.11 1299.91 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
95. IFITM3 ENSG00000142089 506.18 1292.43 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
96. YWHAE ENSG00000108953, ENSG00000274474 506.18 1292.43 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon [Source:HGNC Symbol;Acc:HGNC:12851]
97. PCBP2 ENSG00000197111 503.25 1284.95 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
98. SERF2 ENSG00000140264 503.25 1284.95 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
99. RPL17 ENSG00000265681 488.62 1247.59 ribosomal protein L17 [Source:HGNC Symbol;Acc:HGNC:10307]
100. HMGB1 ENSG00000189403 482.77 1232.65 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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