Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s34.

Sample reads: 391,653. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 7196.51 18374.69 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. TUBA1B ENSG00000123416 4211.26 10752.52 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
3. RPL5 ENSG00000122406 3760.05 9600.45 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
4. RPL41 ENSG00000229117 3678.01 9390.98 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
5. EEF1A1 ENSG00000156508 3659.78 9344.44 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
6. PPIA ENSG00000196262 3263.27 8332.03 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
7. ACTG1 ENSG00000184009 3067.29 7831.64 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
8. RPS5 ENSG00000083845 3008.04 7680.36 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
9. RPS12 ENSG00000112306 2670.78 6819.24 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
10. RPL31 ENSG00000071082 2383.64 6086.10 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
11. MDK ENSG00000110492 2369.97 6051.19 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
12. RPS23 ENSG00000186468 2319.84 5923.20 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
13. RPS11 ENSG00000142534 2046.38 5224.98 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
14. RPL13AP20 ENSG00000234498 2037.26 5201.69 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
15. GNAS ENSG00000087460 1854.96 4736.23 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
16. NGFRAP1 NGFRAP1 1813.94 4631.49
17. RPL15 ENSG00000174748 1813.94 4631.49 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
18. RPS27A ENSG00000143947 1763.81 4503.50 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
19. GAPDH ENSG00000111640 1736.46 4433.66 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
20. RPS20 ENSG00000008988 1663.54 4247.48 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
21. RPL32 ENSG00000144713 1613.40 4119.46 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
22. RPL23 ENSG00000125691 1590.62 4061.29 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
23. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1567.83 4003.11 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
24. RPL18A ENSG00000105640 1549.60 3956.56 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
25. ACTB ENSG00000075624 1540.48 3933.27 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
26. RPS8 ENSG00000142937 1526.81 3898.37 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
27. RPS29 ENSG00000213741 1481.23 3781.99 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
28. TPT1 ENSG00000133112 1353.62 3456.17 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
29. RPL9 ENSG00000163682 1317.16 3363.08 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
30. RPL10 ENSG00000147403 1308.04 3339.79 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
31. RPL37A ENSG00000197756 1257.91 3211.79 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
32. RPL13 ENSG00000167526 1248.79 3188.51 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
33. RPS6 ENSG00000137154 1239.68 3165.25 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
34. HSP90AB1 ENSG00000096384 1235.12 3153.60 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
35. RPS15 ENSG00000115268 1216.89 3107.06 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
36. RPL7A ENSG00000148303, ENSG00000280858 1198.66 3060.51 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
37. RPS27 ENSG00000177954 1189.54 3037.23 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
38. RPL37 ENSG00000145592 1166.76 2979.06 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
39. RPL6 ENSG00000089009 1130.29 2885.94 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
40. IFITM2 ENSG00000185201 1102.95 2816.14 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
41. RPL34 ENSG00000109475 1020.91 2606.67 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
42. RPS15A ENSG00000134419 1002.68 2560.12 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
43. UBB ENSG00000170315 966.22 2467.03 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
44. VIM ENSG00000026025 943.43 2408.84 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
45. RPS25 ENSG00000118181, ENSG00000280831 938.87 2397.20 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
46. RPL10A ENSG00000198755 934.32 2385.58 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
47. TMSB10 ENSG00000034510 902.41 2304.10 thymosin beta 10 [Source:HGNC Symbol;Acc:HGNC:11879]
48. PKM ENSG00000067225 888.74 2269.20 pyruvate kinase M1/2 [Source:HGNC Symbol;Acc:HGNC:9021]
49. TPM4 ENSG00000167460 888.74 2269.20 tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
50. RPS7 ENSG00000171863 884.18 2257.56 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
51. RPLP1 ENSG00000137818 870.51 2222.65 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
52. HSPA8 ENSG00000109971 861.39 2199.37 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
53. SRP14 ENSG00000140319 861.39 2199.37 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
54. PFN2 ENSG00000070087 856.84 2187.75 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
55. RPL38 ENSG00000172809 847.72 2164.46 ribosomal protein L38 [Source:HGNC Symbol;Acc:HGNC:10349]
56. CFL1 ENSG00000172757 829.49 2117.92 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
57. HMGA2 ENSG00000149948 824.93 2106.28 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
58. RPS16 ENSG00000105193 824.93 2106.28 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
59. RPS21 ENSG00000171858 824.93 2106.28 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
60. PFN1 ENSG00000108518 815.82 2083.02 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
61. STMN1 ENSG00000117632 815.82 2083.02 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
62. UBA52 ENSG00000221983 793.03 2024.83 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
63. RPS28 ENSG00000233927 788.47 2013.18 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
64. RPS24 ENSG00000138326 779.36 1989.92 ribosomal protein S24 [Source:HGNC Symbol;Acc:HGNC:10411]
65. HNRNPH1 ENSG00000169045, ENSG00000284254 761.13 1943.38 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
66. PBX1 ENSG00000185630 761.13 1943.38 PBX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8632]
67. RPL26 ENSG00000161970 747.45 1908.45 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
68. DDX17 ENSG00000100201 733.78 1873.54 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
69. MTRNR2L8 ENSG00000255823 733.78 1873.54 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
70. RPS3A ENSG00000145425 715.55 1827.00 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
71. RPL11 ENSG00000142676 710.99 1815.36 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
72. RPS13 ENSG00000110700 701.88 1792.09 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
73. H2AFZ ENSG00000164032 697.32 1780.45 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
74. HNRNPD ENSG00000138668 688.20 1757.17 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
75. NPM1 ENSG00000181163 679.09 1733.91 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
76. RPL3 ENSG00000100316 656.30 1675.72 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
77. FTH1 ENSG00000167996 651.74 1664.07 ferritin heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:3976]
78. FAU ENSG00000149806 647.18 1652.43 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
79. RPS2 ENSG00000140988 642.63 1640.81 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
80. HNRNPA2B1 ENSG00000122566 638.07 1629.17 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:HGNC Symbol;Acc:HGNC:5033]
81. NNAT ENSG00000053438 624.40 1594.27 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
82. RPL22 ENSG00000116251 619.84 1582.62 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
83. CHCHD2 ENSG00000106153 606.17 1547.72 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21645]
84. HNRNPA3 ENSG00000170144 587.94 1501.17 heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:HGNC:24941]
85. TRMT112 ENSG00000173113 587.94 1501.17 tRNA methyltransferase subunit 11-2 [Source:HGNC Symbol;Acc:HGNC:26940]
86. IFITM3 ENSG00000142089 583.38 1489.53 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
87. PTBP1 ENSG00000011304 578.82 1477.89 polypyrimidine tract binding protein 1 [Source:HGNC Symbol;Acc:HGNC:9583]
88. RPLP0 ENSG00000089157 569.70 1454.60 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
89. H3F3B ENSG00000132475 551.47 1408.06 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
90. HNRNPC ENSG00000092199 546.92 1396.44 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
91. RPLP2 ENSG00000177600 533.24 1361.51 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
92. SET ENSG00000119335 533.24 1361.51 SET nuclear proto-oncogene [Source:HGNC Symbol;Acc:HGNC:10760]
93. SFRP1 ENSG00000104332 528.69 1349.89 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
94. MEA1 ENSG00000124733 524.13 1338.25 male-enhanced antigen 1 [Source:HGNC Symbol;Acc:HGNC:6986]
95. RPL17 ENSG00000265681 524.13 1338.25 ribosomal protein L17 [Source:HGNC Symbol;Acc:HGNC:10307]
96. RPL35 ENSG00000136942 524.13 1338.25 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
97. RPL4 ENSG00000174444 515.01 1314.96 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
98. XRCC5 ENSG00000079246 515.01 1314.96 X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
99. ENO1 ENSG00000074800 501.34 1280.06 enolase 1 [Source:HGNC Symbol;Acc:HGNC:3350]
100. RPL29 ENSG00000162244 501.34 1280.06 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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