Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s33.

Sample reads: 391,642. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 10266.01 26212.73 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 4134.01 10555.58 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPS20 ENSG00000008988 2688.12 6863.72 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
4. RPL41 ENSG00000229117 2631.56 6719.30 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
5. ACTB ENSG00000075624 2450.54 6257.09 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
6. ACTG1 ENSG00000184009 2222.00 5673.55 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
7. RPL5 ENSG00000122406 2165.43 5529.10 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
8. TUBA1B ENSG00000123416 2104.34 5373.12 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
9. PPIA ENSG00000196262 2016.09 5147.79 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
10. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1740.04 4442.93 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
11. MDK ENSG00000110492 1715.15 4379.38 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
12. RPS6 ENSG00000137154 1715.15 4379.38 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
13. RPL15 ENSG00000174748 1599.75 4084.72 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
14. RPL18A ENSG00000105640 1568.07 4003.83 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
15. GNAS ENSG00000087460 1355.38 3460.76 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
16. RPL37 ENSG00000145592 1348.59 3443.42 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
17. RPS23 ENSG00000186468 1344.06 3431.86 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
18. RPL23 ENSG00000125691 1337.27 3414.52 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
19. RPS5 ENSG00000083845 1337.27 3414.52 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
20. RPS12 ENSG00000112306 1314.65 3356.76 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
21. STMN1 ENSG00000117632 1303.33 3327.86 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
22. RPL10A ENSG00000198755 1267.13 3235.43 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
23. RPL9 ENSG00000163682 1203.77 3073.65 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
24. RPS11 ENSG00000142534 1199.25 3062.11 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
25. HSP90AB1 ENSG00000096384 1176.62 3004.32 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
26. MTRNR2L8 ENSG00000255823 1133.63 2894.56 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
27. RPL34 ENSG00000109475 1108.74 2831.00 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
28. RPS27A ENSG00000143947 1104.21 2819.44 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
29. RPL31 ENSG00000071082 1086.11 2773.22 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
30. NGFRAP1 NGFRAP1 1068.01 2727.00
31. RPL14 ENSG00000188846 1045.38 2669.22 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
32. MTRNR2L1 ENSG00000256618 1031.80 2634.55 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
33. GAPDH ENSG00000111640 1015.97 2594.13 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
34. RPLP1 ENSG00000137818 982.02 2507.44 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
35. RPS15A ENSG00000134419 979.76 2501.67 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
36. RPS27 ENSG00000177954 972.97 2484.33 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
37. IFITM2 ENSG00000185201 963.92 2461.23 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
38. CFL1 ENSG00000172757 932.24 2380.34 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
39. HNRNPC ENSG00000092199 891.52 2276.36 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
40. RPL13 ENSG00000167526 882.46 2253.23 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
41. RPL7A ENSG00000148303, ENSG00000280858 880.20 2247.46 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
42. RPS16 ENSG00000105193 871.15 2224.35 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
43. VIM ENSG00000026025 862.10 2201.24 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
44. TPT1 ENSG00000133112 837.21 2137.69 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
45. RPL35 ENSG00000136942 834.95 2131.92 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
46. HNRNPD ENSG00000138668 832.68 2126.12 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
47. RPS2 ENSG00000140988 814.58 2079.91 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
48. RPS3A ENSG00000145425 812.32 2074.14 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
49. NPM1 ENSG00000181163 803.27 2051.03 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
50. RPS25 ENSG00000118181, ENSG00000280831 798.74 2039.46 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
51. RPL13AP20 ENSG00000234498 789.69 2016.36 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
52. RPS15 ENSG00000115268 789.69 2016.36 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
53. RPL10 ENSG00000147403 778.38 1987.48 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
54. RPS8 ENSG00000142937 764.80 1952.80 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
55. UBB ENSG00000170315 758.01 1935.47 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
56. RPL37A ENSG00000197756 751.23 1918.15 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
57. HNRNPH1 ENSG00000169045, ENSG00000284254 739.91 1889.25 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
58. RBM3 ENSG00000102317 733.12 1871.91 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
59. RPS13 ENSG00000110700 728.60 1860.37 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
60. EIF4G2 ENSG00000110321 717.29 1831.49 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
61. RPL6 ENSG00000089009 710.50 1814.16 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
62. RPS28 ENSG00000233927 705.97 1802.59 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
63. RPS7 ENSG00000171863 703.71 1796.82 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
64. RPL11 ENSG00000142676 674.29 1721.70 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
65. RPL3 ENSG00000100316 672.03 1715.93 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
66. RPLP0 ENSG00000089157 656.19 1675.48 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
67. HMGA2 ENSG00000149948 653.93 1669.71 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
68. IFITM3 ENSG00000142089 642.62 1640.83 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
69. SOX4 ENSG00000124766 642.62 1640.83 SRY-box 4 [Source:HGNC Symbol;Acc:HGNC:11200]
70. RPS29 ENSG00000213741 622.25 1588.82 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
71. RPS14 ENSG00000164587 617.73 1577.28 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
72. HMGN1 ENSG00000205581 613.20 1565.72 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
73. RPS21 ENSG00000171858 610.94 1559.94 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
74. SRSF2 ENSG00000161547 608.67 1554.15 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
75. TPM4 ENSG00000167460 592.84 1513.73 tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
76. HNRNPA1 ENSG00000135486 586.05 1496.39 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
77. MARCKS ENSG00000277443 583.78 1490.60 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
78. HSPA8 ENSG00000109971 574.73 1467.49 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
79. PFN1 ENSG00000108518 572.47 1461.72 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
80. ENO1 ENSG00000074800 565.68 1444.38 enolase 1 [Source:HGNC Symbol;Acc:HGNC:3350]
81. H2AFZ ENSG00000164032 563.42 1438.61 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
82. RPL4 ENSG00000174444 556.63 1421.27 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
83. RPL32 ENSG00000144713 552.11 1409.73 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
84. DDX17 ENSG00000100201 549.84 1403.93 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
85. RPL39 ENSG00000198918 534.00 1363.49 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
86. SERF2 ENSG00000140264 531.74 1357.72 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
87. HNRNPA2B1 ENSG00000122566 529.48 1351.95 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:HGNC Symbol;Acc:HGNC:5033]
88. RPL26 ENSG00000161970 522.69 1334.61 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
89. PCBP2 ENSG00000197111 515.90 1317.27 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
90. RPL18 ENSG00000063177 511.38 1305.73 ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:10310]
91. MARCKSL1 ENSG00000175130 502.33 1282.63 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
92. PBX1 ENSG00000185630 497.80 1271.06 PBX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8632]
93. RPL35A ENSG00000182899 497.80 1271.06 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
94. SRSF3 ENSG00000112081 493.28 1259.52 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
95. PFN2 ENSG00000070087 488.75 1247.95 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
96. RPL29 ENSG00000162244 488.75 1247.95 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
97. H3F3B ENSG00000132475 484.22 1236.38 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
98. RAN ENSG00000132341 481.96 1230.61 RAN, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9846]
99. YBX1 ENSG00000065978 479.70 1224.84 Y-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8014]
100. RPS14P3 477.44 1219.07 ribosomal protein S14 pseudogene 3
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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