Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s32.

Sample reads: 391,631. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 9894.64 25265.20 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 4196.79 10716.18 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPL41 ENSG00000229117 3536.21 9029.44 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
4. RPS20 ENSG00000008988 3316.95 8469.58 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
5. ACTG1 ENSG00000184009 2285.33 5835.41 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
6. RPL5 ENSG00000122406 2262.84 5777.99 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
7. TUBA1B ENSG00000123416 2127.91 5433.45 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
8. ACTB ENSG00000075624 2094.18 5347.33 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
9. PPIA ENSG00000196262 2035.15 5196.60 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
10. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2023.90 5167.87 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
11. RPL15 ENSG00000174748 1953.63 4988.44 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
12. RPL18A ENSG00000105640 1717.51 4385.53 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
13. GNAS ENSG00000087460 1666.91 4256.33 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
14. RPS6 ENSG00000137154 1610.69 4112.77 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
15. RPS5 ENSG00000083845 1602.26 4091.25 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
16. RPL13AP20 ENSG00000234498 1548.85 3954.87 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
17. RPL37 ENSG00000145592 1546.04 3947.69 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
18. MDK ENSG00000110492 1481.39 3782.62 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
19. RPL9 ENSG00000163682 1450.46 3703.64 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
20. RPL23 ENSG00000125691 1419.54 3624.69 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
21. RPL10A ENSG00000198755 1301.48 3323.23 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
22. RPS12 ENSG00000112306 1295.86 3308.88 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
23. RPL34 ENSG00000109475 1293.05 3301.70 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
24. RPS23 ENSG00000186468 1284.62 3280.18 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
25. GAPDH ENSG00000111640 1253.70 3201.23 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
26. RPS11 ENSG00000142534 1239.64 3165.33 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
27. STMN1 ENSG00000117632 1236.83 3158.15 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
28. RPLP1 ENSG00000137818 1211.53 3093.55 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
29. RPS27A ENSG00000143947 1208.72 3086.37 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
30. MTRNR2L8 ENSG00000255823 1121.58 2863.87 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
31. NGFRAP1 NGFRAP1 1087.85 2777.74
32. RPS15A ENSG00000134419 1082.23 2763.39 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
33. RPL31 ENSG00000071082 1079.42 2756.22 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
34. RPL13 ENSG00000167526 1070.98 2734.67 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
35. RPL35 ENSG00000136942 1068.17 2727.49 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
36. RPS27 ENSG00000177954 1011.95 2583.94 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
37. TPT1 ENSG00000133112 983.84 2512.16 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
38. MTRNR2L1 ENSG00000256618 966.98 2469.11 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
39. RPL37A ENSG00000197756 964.17 2461.93 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
40. RPS8 ENSG00000142937 961.35 2454.73 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
41. RPS13 ENSG00000110700 933.24 2382.96 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
42. HSP90AB1 ENSG00000096384 922.00 2354.26 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
43. RPL7A ENSG00000148303, ENSG00000280858 919.19 2347.08 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
44. RPL10 ENSG00000147403 877.03 2239.43 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
45. RPS2 ENSG00000140988 862.97 2203.53 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
46. UBB ENSG00000170315 860.16 2196.35 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
47. NPM1 ENSG00000181163 854.54 2182.00 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
48. RPL3 ENSG00000100316 840.48 2146.10 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
49. RPS28 ENSG00000233927 792.70 2024.10 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
50. RPS25 ENSG00000118181, ENSG00000280831 787.07 2009.72 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
51. IFITM2 ENSG00000185201 761.78 1945.15 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
52. RPS21 ENSG00000171858 756.15 1930.77 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
53. HNRNPC ENSG00000092199 750.53 1916.42 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
54. RPL11 ENSG00000142676 750.53 1916.42 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
55. RPL6 ENSG00000089009 747.72 1909.25 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
56. CFL1 ENSG00000172757 739.29 1887.72 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
57. PFN1 ENSG00000108518 739.29 1887.72 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
58. HNRNPD ENSG00000138668 730.85 1866.17 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
59. RPS15 ENSG00000115268 730.85 1866.17 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
60. RPL29 ENSG00000162244 728.04 1858.99 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
61. VIM ENSG00000026025 719.61 1837.47 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
62. NNAT ENSG00000053438 716.80 1830.29 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
63. RPL14 ENSG00000188846 708.37 1808.77 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
64. RPS14 ENSG00000164587 705.56 1801.59 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
65. RPS16 ENSG00000105193 699.93 1787.22 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
66. RPS3A ENSG00000145425 685.88 1751.34 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
67. SOX4 ENSG00000124766 674.63 1722.62 SRY-box 4 [Source:HGNC Symbol;Acc:HGNC:11200]
68. EIF4G2 ENSG00000110321 671.82 1715.44 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
69. RPLP0 ENSG00000089157 657.77 1679.57 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
70. RPS7 ENSG00000171863 654.96 1672.39 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
71. HNRNPH1 ENSG00000169045, ENSG00000284254 638.09 1629.31 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
72. HSPA8 ENSG00000109971 638.09 1629.31 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
73. RBM3 ENSG00000102317 629.66 1607.79 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
74. HMGA2 ENSG00000149948 626.85 1600.61 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
75. RPS29 ENSG00000213741 618.42 1579.09 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
76. RPL39 ENSG00000198918 612.79 1564.71 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
77. HMGN1 ENSG00000205581 609.98 1557.54 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
78. HNRNPA1 ENSG00000135486 601.55 1536.01 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
79. RPL35A ENSG00000182899 598.74 1528.84 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
80. RPL26 ENSG00000161970 590.31 1507.31 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
81. RPL32 ENSG00000144713 584.68 1492.94 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
82. H2AFZ ENSG00000164032 579.06 1478.59 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
83. DDX17 ENSG00000100201 576.25 1471.41 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
84. ATP5G2 573.44 1464.23 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
85. GABARAP ENSG00000170296 567.82 1449.88 GABA type A receptor-associated protein [Source:HGNC Symbol;Acc:HGNC:4067]
86. TPM4 ENSG00000167460 567.82 1449.88 tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
87. YBX1 ENSG00000065978 556.57 1421.16 Y-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8014]
88. RPL18 ENSG00000063177 553.76 1413.98 ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:10310]
89. RPL4 ENSG00000174444 553.76 1413.98 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
90. SERF2 ENSG00000140264 545.33 1392.46 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
91. EEF1B2 ENSG00000114942, ENSG00000283391 522.84 1335.03 eukaryotic translation elongation factor 1 beta 2 [Source:HGNC Symbol;Acc:HGNC:3208]
92. RPL38 ENSG00000172809 522.84 1335.03 ribosomal protein L38 [Source:HGNC Symbol;Acc:HGNC:10349]
93. SRSF2 ENSG00000161547 522.84 1335.03 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
94. SRSF3 ENSG00000112081 511.60 1306.33 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
95. H3F3B ENSG00000132475 505.98 1291.98 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
96. ENO1 ENSG00000074800 503.17 1284.81 enolase 1 [Source:HGNC Symbol;Acc:HGNC:3350]
97. HMGB1 ENSG00000189403 494.73 1263.25 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
98. RPL7 ENSG00000147604 489.11 1248.90 ribosomal protein L7 [Source:HGNC Symbol;Acc:HGNC:10363]
99. PABPC1 ENSG00000070756 486.30 1241.73 poly(A) binding protein cytoplasmic 1 [Source:HGNC Symbol;Acc:HGNC:8554]
100. MARCKS ENSG00000277443 483.49 1234.55 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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