Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s31.

Sample reads: 391,632. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 10215.12 26083.50 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 4407.49 11254.18 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPL41 ENSG00000229117 3276.26 8365.67 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
4. RPS20 ENSG00000008988 2648.82 6763.55 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
5. PPIA ENSG00000196262 2500.46 6384.73 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
6. RPL5 ENSG00000122406 2466.46 6297.91 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
7. ACTB ENSG00000075624 2361.38 6029.60 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
8. ACTG1 ENSG00000184009 2231.56 5698.11 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
9. TUBA1B ENSG00000123416 2145.02 5477.14 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
10. MDK ENSG00000110492 1922.48 4908.90 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
11. RPL15 ENSG00000174748 1919.39 4901.01 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
12. RPL18A ENSG00000105640 1780.30 4545.85 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
13. RPS11 ENSG00000142534 1780.30 4545.85 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
14. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1724.67 4403.81 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
15. RPL37 ENSG00000145592 1551.59 3961.86 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
16. GNAS ENSG00000087460 1542.31 3938.17 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
17. RPS6 ENSG00000137154 1517.59 3875.05 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
18. RPS12 ENSG00000112306 1489.77 3804.01 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
19. RPL9 ENSG00000163682 1431.04 3654.05 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
20. RPL23 ENSG00000125691 1406.32 3590.93 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
21. RPS5 ENSG00000083845 1387.77 3543.56 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
22. RPL34 ENSG00000109475 1329.05 3393.62 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
23. RPS23 ENSG00000186468 1298.14 3314.70 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
24. RPS27A ENSG00000143947 1295.05 3306.81 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
25. STMN1 ENSG00000117632 1295.05 3306.81 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
26. RPL13AP20 ENSG00000234498 1264.14 3227.88 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
27. GAPDH ENSG00000111640 1257.96 3212.10 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
28. RPL10A ENSG00000198755 1251.78 3196.32 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
29. RPS15A ENSG00000134419 1245.60 3180.54 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
30. RPL31 ENSG00000071082 1242.50 3172.63 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
31. HSP90AB1 ENSG00000096384 1233.23 3148.95 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
32. MTRNR2L8 ENSG00000255823 1211.60 3093.72 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
33. RPL13 ENSG00000167526 1140.51 2912.20 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
34. RPS8 ENSG00000142937 1121.96 2864.84 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
35. RPS27 ENSG00000177954 1109.60 2833.28 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
36. RPL35 ENSG00000136942 1072.51 2738.57 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
37. RPL7A ENSG00000148303, ENSG00000280858 1057.06 2699.12 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
38. RPLP1 ENSG00000137818 1057.06 2699.12 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
39. RPL14 ENSG00000188846 951.97 2430.78 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
40. RPL10 ENSG00000147403 948.88 2422.89 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
41. RPS25 ENSG00000118181, ENSG00000280831 890.15 2272.93 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
42. TPT1 ENSG00000133112 865.43 2209.81 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
43. NGFRAP1 NGFRAP1 856.15 2186.11
44. RPS28 ENSG00000233927 856.15 2186.11 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
45. VIM ENSG00000026025 856.15 2186.11 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
46. CFL1 ENSG00000172757 853.06 2178.22 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
47. RPLP0 ENSG00000089157 840.70 2146.66 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
48. MTRNR2L1 ENSG00000256618 837.61 2138.77 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
49. RPS15 ENSG00000115268 834.52 2130.88 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
50. RPS2 ENSG00000140988 812.88 2075.62 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
51. UBB ENSG00000170315 806.70 2059.84 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
52. RPL6 ENSG00000089009 803.61 2051.95 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
53. RPS16 ENSG00000105193 803.61 2051.95 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
54. IFITM2 ENSG00000185201 788.16 2012.50 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
55. HBE1 ENSG00000213931 757.25 1933.58 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
56. PFN1 ENSG00000108518 754.16 1925.69 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
57. RPL3 ENSG00000100316 754.16 1925.69 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
58. RPS13 ENSG00000110700 751.07 1917.80 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
59. RPS3A ENSG00000145425 751.07 1917.80 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
60. RPL11 ENSG00000142676 741.79 1894.10 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
61. HNRNPD ENSG00000138668 732.52 1870.43 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
62. NPM1 ENSG00000181163 732.52 1870.43 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
63. RPS21 ENSG00000171858 729.43 1862.54 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
64. RPL18 ENSG00000063177 723.25 1846.76 ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:10310]
65. DDX17 ENSG00000100201 707.79 1807.29 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
66. RPL29 ENSG00000162244 692.34 1767.84 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
67. RPS14 ENSG00000164587 686.16 1752.06 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
68. HNRNPH1 ENSG00000169045, ENSG00000284254 670.71 1712.60 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
69. HNRNPC ENSG00000092199 661.43 1688.91 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
70. ENO1 ENSG00000074800 652.16 1665.24 enolase 1 [Source:HGNC Symbol;Acc:HGNC:3350]
71. RPL37A ENSG00000197756 649.07 1657.35 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
72. RPS7 ENSG00000171863 645.98 1649.46 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
73. SOX4 ENSG00000124766 645.98 1649.46 SRY-box 4 [Source:HGNC Symbol;Acc:HGNC:11200]
74. RPL32 ENSG00000144713 636.71 1625.79 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
75. UBA52 ENSG00000221983 618.16 1578.42 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
76. HMGA2 ENSG00000149948 615.07 1570.53 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
77. RPS29 ENSG00000213741 608.89 1554.75 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
78. HSPA8 ENSG00000109971 605.80 1546.86 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
79. RPS24 ENSG00000138326 605.80 1546.86 ribosomal protein S24 [Source:HGNC Symbol;Acc:HGNC:10411]
80. RPL39 ENSG00000198918 593.43 1515.28 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
81. RBM3 ENSG00000102317 590.34 1507.39 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
82. SRSF3 ENSG00000112081 590.34 1507.39 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
83. NNAT ENSG00000053438 574.89 1467.94 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
84. RPL26 ENSG00000161970 571.80 1460.05 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
85. RPL35A ENSG00000182899 568.71 1452.16 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
86. HMGN1 ENSG00000205581 562.53 1436.38 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
87. YWHAE ENSG00000108953, ENSG00000274474 562.53 1436.38 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon [Source:HGNC Symbol;Acc:HGNC:12851]
88. RPL4 ENSG00000174444 559.44 1428.49 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
89. H2AFZ ENSG00000164032 550.16 1404.79 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
90. EIF4G2 ENSG00000110321 547.07 1396.90 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
91. PFN2 ENSG00000070087 543.98 1389.01 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
92. RPS19 ENSG00000105372 540.89 1381.12 ribosomal protein S19 [Source:HGNC Symbol;Acc:HGNC:10402]
93. ATP5G2 537.80 1373.23 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
94. FTH1 ENSG00000167996 537.80 1373.23 ferritin heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:3976]
95. IFITM3 ENSG00000142089 534.71 1365.34 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
96. PCBP2 ENSG00000197111 534.71 1365.34 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
97. RPL38 ENSG00000172809 531.62 1357.45 ribosomal protein L38 [Source:HGNC Symbol;Acc:HGNC:10349]
98. XRCC5 ENSG00000079246 531.62 1357.45 X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
99. SERF2 ENSG00000140264 519.26 1325.89 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
100. HNRNPA2B1 ENSG00000122566 516.16 1317.97 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:HGNC Symbol;Acc:HGNC:5033]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA