Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s25.

Sample reads: 391,645. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 8313.33 21226.69 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 4255.18 10864.89 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPL41 ENSG00000229117 2917.44 7449.19 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
4. RPL5 ENSG00000122406 2340.18 5975.26 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
5. ACTB ENSG00000075624 2233.02 5701.64 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
6. ACTG1 ENSG00000184009 2136.23 5454.50 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
7. RPS20 ENSG00000008988 2136.23 5454.50 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
8. PPIA ENSG00000196262 2032.53 5189.72 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
9. TUBA1B ENSG00000123416 1804.39 4607.21 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
10. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1759.45 4492.46 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
11. RPL15 ENSG00000174748 1669.58 4262.99 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
12. RPS6 ENSG00000137154 1548.59 3954.06 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
13. RPL18A ENSG00000105640 1424.15 3636.33 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
14. RPS5 ENSG00000083845 1410.33 3601.04 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
15. GNAS ENSG00000087460 1393.04 3556.89 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
16. VIM ENSG00000026025 1382.67 3530.42 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
17. RPS12 ENSG00000112306 1372.30 3503.94 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
18. RPL23 ENSG00000125691 1361.93 3477.46 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
19. RPL9 ENSG00000163682 1272.06 3247.99 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
20. RPL34 ENSG00000109475 1261.69 3221.51 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
21. RPL37 ENSG00000145592 1254.78 3203.87 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
22. RPS11 ENSG00000142534 1247.86 3186.20 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
23. MTRNR2L1 ENSG00000256618 1216.75 3106.77 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
24. RPL13AP20 ENSG00000234498 1216.75 3106.77 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
25. STMN1 ENSG00000117632 1206.38 3080.29 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
26. MDK ENSG00000110492 1189.10 3036.17 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
27. RPS27A ENSG00000143947 1182.19 3018.52 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
28. GAPDH ENSG00000111640 1161.45 2965.57 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
29. MTRNR2L8 ENSG00000255823 1137.25 2903.78 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
30. RPL10A ENSG00000198755 1123.42 2868.46 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
31. RPS23 ENSG00000186468 1071.57 2736.07 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
32. RPS27 ENSG00000177954 1057.75 2700.79 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
33. RPL31 ENSG00000071082 1037.01 2647.83 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
34. HSP90AB1 ENSG00000096384 1016.27 2594.87 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
35. RPLP1 ENSG00000137818 1005.90 2568.40 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
36. RPL13 ENSG00000167526 964.42 2462.48 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
37. RPL7A ENSG00000148303, ENSG00000280858 964.42 2462.48 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
38. RPS15A ENSG00000134419 922.93 2356.55 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
39. RPL14 ENSG00000188846 912.56 2330.07 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
40. RPS2 ENSG00000140988 905.65 2312.42 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
41. NGFRAP1 NGFRAP1 902.19 2303.59
42. TPT1 ENSG00000133112 878.00 2241.83 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
43. RPS16 ENSG00000105193 846.89 2162.39 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
44. RPL10 ENSG00000147403 839.97 2144.72 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
45. RPS8 ENSG00000142937 822.69 2100.60 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
46. RPS25 ENSG00000118181, ENSG00000280831 801.95 2047.64 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
47. CFL1 ENSG00000172757 781.21 1994.69 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
48. RBM3 ENSG00000102317 774.30 1977.04 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
49. RPS28 ENSG00000233927 770.84 1968.21 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
50. RPL37A ENSG00000197756 757.01 1932.90 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
51. UBB ENSG00000170315 753.56 1924.09 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
52. RPL6 ENSG00000089009 750.10 1915.25 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
53. RPLP0 ENSG00000089157 746.64 1906.42 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
54. HBE1 ENSG00000213931 736.27 1879.94 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
55. RPL35 ENSG00000136942 736.27 1879.94 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
56. RPL11 ENSG00000142676 718.99 1835.82 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
57. RPL3 ENSG00000100316 715.53 1826.99 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
58. HNRNPC ENSG00000092199 712.08 1818.18 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
59. RPS3A ENSG00000145425 701.71 1791.70 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
60. NNAT ENSG00000053438 691.34 1765.22 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
61. RPL29 ENSG00000162244 674.05 1721.07 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
62. NPM1 ENSG00000181163 670.60 1712.26 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
63. DDX17 ENSG00000100201 660.23 1685.79 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
64. HNRNPD ENSG00000138668 660.23 1685.79 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
65. RPS14 ENSG00000164587 649.86 1659.31 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
66. RPS21 ENSG00000171858 649.86 1659.31 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
67. MARCKS ENSG00000277443 642.94 1641.64 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
68. PFN1 ENSG00000108518 642.94 1641.64 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
69. EIF4G2 ENSG00000110321 636.03 1624.00 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
70. RPS29 ENSG00000213741 604.92 1544.56 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
71. HMGN1 ENSG00000205581 591.09 1509.25 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
72. RPL39 ENSG00000198918 584.18 1491.61 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
73. YWHAE ENSG00000108953, ENSG00000274474 584.18 1491.61 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon [Source:HGNC Symbol;Acc:HGNC:12851]
74. RPS15 ENSG00000115268 577.27 1473.96 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
75. COL3A1 ENSG00000168542 573.81 1465.13 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
76. RPL32 ENSG00000144713 573.81 1465.13 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
77. RPS13 ENSG00000110700 570.35 1456.29 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
78. RPS7 ENSG00000171863 559.98 1429.81 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
79. SRSF3 ENSG00000112081 559.98 1429.81 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
80. ATP5G2 549.61 1403.34 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
81. HNRNPA1 ENSG00000135486 549.61 1403.34 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
82. SERF2 ENSG00000140264 525.42 1341.57 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
83. SOX4 ENSG00000124766 521.96 1332.74 SRY-box 4 [Source:HGNC Symbol;Acc:HGNC:11200]
84. SRSF2 ENSG00000161547 508.13 1297.42 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
85. TUBB3 ENSG00000258947 508.13 1297.42 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
86. HSPA8 ENSG00000109971 501.22 1279.78 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
87. RPL38 ENSG00000172809 494.31 1262.14 ribosomal protein L38 [Source:HGNC Symbol;Acc:HGNC:10349]
88. RPL26 ENSG00000161970 490.85 1253.30 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
89. YWHAB ENSG00000166913 487.39 1244.47 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta [Source:HGNC Symbol;Acc:HGNC:12849]
90. H2AFZ ENSG00000164032 483.94 1235.66 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
91. PCBP2 ENSG00000197111 483.94 1235.66 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
92. RPL18 ENSG00000063177 483.94 1235.66 ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:10310]
93. RPL35A ENSG00000182899 480.48 1226.82 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
94. SRP14 ENSG00000140319 480.48 1226.82 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
95. HNRNPH1 ENSG00000169045, ENSG00000284254 477.02 1217.99 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
96. RPS14P3 466.65 1191.51 ribosomal protein S14 pseudogene 3
97. RPS19 ENSG00000105372 466.65 1191.51 ribosomal protein S19 [Source:HGNC Symbol;Acc:HGNC:10402]
98. RPL17 ENSG00000265681 463.20 1182.70 ribosomal protein L17 [Source:HGNC Symbol;Acc:HGNC:10307]
99. ENO1 ENSG00000074800 459.74 1173.87 enolase 1 [Source:HGNC Symbol;Acc:HGNC:3350]
100. RPL4 ENSG00000174444 456.28 1165.03 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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