Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s23.

Sample reads: 391,663. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 9187.55 23457.77 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 4650.52 11873.77 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPL41 ENSG00000229117 3224.21 8232.10 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
4. ACTG1 ENSG00000184009 2449.86 6255.01 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
5. RPS20 ENSG00000008988 2416.49 6169.81 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
6. RPL5 ENSG00000122406 2282.98 5828.93 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
7. ACTB ENSG00000075624 2211.78 5647.15 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
8. PPIA ENSG00000196262 2082.72 5317.63 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
9. TUBA1B ENSG00000123416 2027.09 5175.59 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
10. RPL15 ENSG00000174748 1991.49 5084.70 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
11. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1817.93 4641.56 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
12. RPS5 ENSG00000083845 1590.97 4062.09 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
13. STMN1 ENSG00000117632 1582.07 4039.36 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
14. RPL18A ENSG00000105640 1504.19 3840.52 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
15. RPS23 ENSG00000186468 1481.93 3783.68 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
16. RPL9 ENSG00000163682 1479.71 3778.01 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
17. RPS6 ENSG00000137154 1461.91 3732.57 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
18. RPL23 ENSG00000125691 1415.18 3613.26 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
19. VIM ENSG00000026025 1412.96 3607.59 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
20. RPL31 ENSG00000071082 1404.06 3584.86 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
21. RPL37 ENSG00000145592 1404.06 3584.86 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
22. RPS12 ENSG00000112306 1390.70 3550.75 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
23. RPS15A ENSG00000134419 1366.23 3488.28 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
24. RPS11 ENSG00000142534 1339.53 3420.11 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
25. GNAS ENSG00000087460 1306.15 3334.88 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
26. RPL34 ENSG00000109475 1239.40 3164.45 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
27. RPS27A ENSG00000143947 1232.72 3147.40 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
28. RPL13 ENSG00000167526 1226.04 3130.34 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
29. MTRNR2L1 ENSG00000256618 1217.14 3107.62 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
30. NGFRAP1 NGFRAP1 1208.24 3084.89
31. RPS8 ENSG00000142937 1157.07 2954.25 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
32. RPL10A ENSG00000198755 1125.91 2874.69 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
33. MTRNR2L8 ENSG00000255823 1105.89 2823.57 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
34. RPL7A ENSG00000148303, ENSG00000280858 1072.51 2738.35 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
35. GAPDH ENSG00000111640 1056.94 2698.59 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
36. MDK ENSG00000110492 1032.46 2636.09 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
37. HSP90AB1 ENSG00000096384 1010.21 2579.28 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
38. RPLP1 ENSG00000137818 1001.31 2556.56 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
39. RPL37A ENSG00000197756 981.28 2505.42 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
40. RPL14 ENSG00000188846 974.61 2488.39 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
41. NNAT ENSG00000053438 959.03 2448.61 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
42. RPL13AP20 ENSG00000234498 959.03 2448.61 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
43. RPS16 ENSG00000105193 941.23 2403.16 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
44. TUBB3 ENSG00000258947 936.78 2391.80 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
45. RPL10 ENSG00000147403 932.33 2380.44 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
46. RPLP0 ENSG00000089157 930.10 2374.74 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
47. RPS27 ENSG00000177954 930.10 2374.74 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
48. TPT1 ENSG00000133112 927.88 2369.08 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
49. RPS2 ENSG00000140988 883.38 2255.46 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
50. CFL1 ENSG00000172757 867.80 2215.68 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
51. RPL35 ENSG00000136942 854.45 2181.59 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
52. NPM1 ENSG00000181163 845.55 2158.87 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
53. RPS13 ENSG00000110700 836.65 2136.15 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
54. UBB ENSG00000170315 827.75 2113.42 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
55. RPL6 ENSG00000089009 818.85 2090.70 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
56. RPS21 ENSG00000171858 785.47 2005.47 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
57. RPS7 ENSG00000171863 781.02 1994.11 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
58. RPS25 ENSG00000118181, ENSG00000280831 778.79 1988.42 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
59. RBM3 ENSG00000102317 772.12 1971.39 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
60. RPS15 ENSG00000115268 769.89 1965.69 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
61. EIF4G2 ENSG00000110321 749.87 1914.58 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
62. HNRNPC ENSG00000092199 749.87 1914.58 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
63. RPL11 ENSG00000142676 720.94 1840.71 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
64. RPS28 ENSG00000233927 705.37 1800.96 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
65. MARCKS ENSG00000277443 696.46 1778.21 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
66. RPS14 ENSG00000164587 685.34 1749.82 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
67. RPS3A ENSG00000145425 676.44 1727.10 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
68. RPL32 ENSG00000144713 669.76 1710.04 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
69. RPL39 ENSG00000198918 667.54 1704.37 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
70. PFN2 ENSG00000070087 663.09 1693.01 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
71. HNRNPD ENSG00000138668 649.74 1658.92 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
72. ATP5G2 629.71 1607.78 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
73. HNRNPA1 ENSG00000135486 629.71 1607.78 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
74. RPL26 ENSG00000161970 625.26 1596.42 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
75. HNRNPH1 ENSG00000169045, ENSG00000284254 620.81 1585.06 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
76. H2AFZ ENSG00000164032 618.59 1579.39 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
77. RPL4 ENSG00000174444 618.59 1579.39 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
78. SRP14 ENSG00000140319 594.11 1516.89 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
79. CKB ENSG00000166165 587.43 1499.83 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
80. RPL38 ENSG00000172809 587.43 1499.83 ribosomal protein L38 [Source:HGNC Symbol;Acc:HGNC:10349]
81. MAP1B ENSG00000131711 582.98 1488.47 microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
82. YWHAE ENSG00000108953, ENSG00000274474 576.31 1471.44 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon [Source:HGNC Symbol;Acc:HGNC:12851]
83. RPL3 ENSG00000100316 571.86 1460.08 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
84. RPS24 ENSG00000138326 569.63 1454.39 ribosomal protein S24 [Source:HGNC Symbol;Acc:HGNC:10411]
85. MORF4L1 ENSG00000185787 562.96 1437.36 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
86. RPL29 ENSG00000162244 562.96 1437.36 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
87. HSPA8 ENSG00000109971 560.73 1431.66 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
88. COL3A1 ENSG00000168542 558.51 1426.00 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
89. RPS29 ENSG00000213741 556.28 1420.30 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
90. SRSF3 ENSG00000112081 554.06 1414.63 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
91. YBX1 ENSG00000065978 545.16 1391.91 Y-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8014]
92. RPS14P3 536.26 1369.19 ribosomal protein S14 pseudogene 3
93. RPL35A ENSG00000182899 529.58 1352.13 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
94. PFN1 ENSG00000108518 525.13 1340.77 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
95. FTH1 ENSG00000167996 518.45 1323.71 ferritin heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:3976]
96. CD24 ENSG00000272398 516.23 1318.05 CD24 molecule [Source:HGNC Symbol;Acc:HGNC:1645]
97. DPYSL2 ENSG00000092964 511.78 1306.68 dihydropyrimidinase like 2 [Source:HGNC Symbol;Acc:HGNC:3014]
98. HBE1 ENSG00000213931 505.10 1289.63 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
99. DDX17 ENSG00000100201 502.88 1283.96 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
100. H3F3B ENSG00000132475 502.88 1283.96 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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