Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s20.

Sample reads: 391,643. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 8787.31 22437.04 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 4530.40 11567.68 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. ACTG1 ENSG00000184009 3029.71 7735.90 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
4. RPL41 ENSG00000229117 2467.13 6299.44 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
5. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2231.90 5698.81 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
6. ACTB ENSG00000075624 2165.30 5528.76 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
7. RPL5 ENSG00000122406 2114.28 5398.49 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
8. GAPDH ENSG00000111640 2100.11 5362.31 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
9. PPIA ENSG00000196262 1904.55 4862.97 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
10. TUBB3 ENSG00000258947 1890.38 4826.79 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
11. STMN1 ENSG00000117632 1857.79 4743.58 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
12. TUBA1B ENSG00000123416 1849.29 4721.88 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
13. RPS20 ENSG00000008988 1805.36 4609.71 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
14. RPL15 ENSG00000174748 1743.01 4450.51 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
15. GNAS ENSG00000087460 1650.90 4215.32 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
16. RPS6 ENSG00000137154 1453.92 3712.36 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
17. RPL9 ENSG00000163682 1391.57 3553.16 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
18. RPS5 ENSG00000083845 1336.31 3412.06 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
19. RPL13AP20 ENSG00000234498 1288.12 3289.02 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
20. RPL18A ENSG00000105640 1237.11 3158.77 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
21. RPS12 ENSG00000112306 1225.77 3129.81 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
22. NNAT ENSG00000053438 1140.75 2912.73 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
23. VIM ENSG00000026025 1140.75 2912.73 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
24. RPS23 ENSG00000186468 1133.66 2894.63 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
25. NGFRAP1 NGFRAP1 1106.74 2825.89
26. RPL37 ENSG00000145592 1078.40 2753.53 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
27. MTRNR2L8 ENSG00000255823 1047.22 2673.91 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
28. RPL7A ENSG00000148303, ENSG00000280858 1044.39 2666.69 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
29. RPS27A ENSG00000143947 1042.97 2663.06 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
30. HSP90AB1 ENSG00000096384 1035.88 2644.96 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
31. RPL23 ENSG00000125691 1027.38 2623.26 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
32. RPS11 ENSG00000142534 1023.13 2612.40 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
33. RPS15A ENSG00000134419 997.62 2547.27 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
34. RPL10A ENSG00000198755 986.29 2518.34 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
35. MAP1B ENSG00000131711 943.77 2409.77 microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
36. RPL31 ENSG00000071082 942.36 2406.17 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
37. RPL13 ENSG00000167526 935.27 2388.07 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
38. MTRNR2L1 ENSG00000256618 901.26 2301.23 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
39. RPL34 ENSG00000109475 897.01 2290.38 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
40. RPS2 ENSG00000140988 841.74 2149.25 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
41. RPS8 ENSG00000142937 837.49 2138.40 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
42. RBM3 ENSG00000102317 827.57 2113.07 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
43. RPS13 ENSG00000110700 824.74 2105.85 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
44. CD24 ENSG00000272398 809.15 2066.04 CD24 molecule [Source:HGNC Symbol;Acc:HGNC:1645]
45. RPL6 ENSG00000089009 779.39 1990.05 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
46. EIF4G2 ENSG00000110321 777.98 1986.45 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
47. TPT1 ENSG00000133112 770.89 1968.35 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
48. INA ENSG00000148798 768.06 1961.12 internexin neuronal intermediate filament protein alpha [Source:HGNC Symbol;Acc:HGNC:6057]
49. MDK ENSG00000110492 759.55 1939.39 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
50. CFL1 ENSG00000172757 752.47 1921.32 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
51. RPS27 ENSG00000177954 746.80 1906.84 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
52. RPL10 ENSG00000147403 742.55 1895.99 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
53. RPLP1 ENSG00000137818 722.71 1845.33 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
54. TUBA1A ENSG00000167552 704.29 1798.30 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
55. RPL37A ENSG00000197756 702.87 1794.67 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
56. RPL11 ENSG00000142676 697.20 1780.19 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
57. RPLP0 ENSG00000089157 685.87 1751.26 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
58. RPL14 ENSG00000188846 681.61 1740.39 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
59. HNRNPA1 ENSG00000135486 673.11 1718.68 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
60. SOX4 ENSG00000124766 653.27 1668.02 SRY-box 4 [Source:HGNC Symbol;Acc:HGNC:11200]
61. PFN2 ENSG00000070087 651.86 1664.42 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
62. NPM1 ENSG00000181163 649.02 1657.17 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
63. RPL3 ENSG00000100316 649.02 1657.17 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
64. MARCKS ENSG00000277443 647.61 1653.57 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
65. RPL35 ENSG00000136942 647.61 1653.57 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
66. RPS25 ENSG00000118181, ENSG00000280831 647.61 1653.57 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
67. HNRNPH1 ENSG00000169045, ENSG00000284254 641.94 1639.09 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
68. ENO1 ENSG00000074800 636.27 1624.62 enolase 1 [Source:HGNC Symbol;Acc:HGNC:3350]
69. SST ENSG00000157005 636.27 1624.62 somatostatin [Source:HGNC Symbol;Acc:HGNC:11329]
70. RPL4 ENSG00000174444 633.43 1617.37 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
71. HNRNPC ENSG00000092199 630.60 1610.14 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
72. RPS15 ENSG00000115268 629.18 1606.51 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
73. RPL29 ENSG00000162244 627.77 1602.91 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
74. RPS16 ENSG00000105193 624.93 1595.66 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
75. RPS21 ENSG00000171858 607.93 1552.26 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
76. DPYSL2 ENSG00000092964 603.68 1541.40 dihydropyrimidinase like 2 [Source:HGNC Symbol;Acc:HGNC:3014]
77. RPS28 ENSG00000233927 599.42 1530.53 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
78. RPS14 ENSG00000164587 590.92 1508.82 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
79. HNRNPD ENSG00000138668 588.09 1501.60 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
80. UBB ENSG00000170315 585.25 1494.35 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
81. RPL39 ENSG00000198918 579.59 1479.89 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
82. TUBB2B ENSG00000137285 579.59 1479.89 tubulin beta 2B class IIb [Source:HGNC Symbol;Acc:HGNC:30829]
83. CKB ENSG00000166165 576.75 1472.64 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
84. YWHAZ ENSG00000164924 576.75 1472.64 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:HGNC Symbol;Acc:HGNC:12855]
85. RPS7 ENSG00000171863 572.50 1461.79 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
86. FTH1 ENSG00000167996 571.08 1458.16 ferritin heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:3976]
87. SRP14 ENSG00000140319 561.16 1432.84 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
88. ATP5G2 558.33 1425.61 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
89. MLLT11 ENSG00000213190 554.08 1414.76 MLLT11, transcription factor 7 cofactor [Source:HGNC Symbol;Acc:HGNC:16997]
90. H2AFZ ENSG00000164032 552.66 1411.13 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
91. CALM2 ENSG00000143933 544.16 1389.43 calmodulin 2 [Source:HGNC Symbol;Acc:HGNC:1445]
92. RPS3A ENSG00000145425 539.91 1378.58 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
93. YWHAE ENSG00000108953, ENSG00000274474 537.07 1371.33 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon [Source:HGNC Symbol;Acc:HGNC:12851]
94. RPL32 ENSG00000144713 534.24 1364.10 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
95. SRSF3 ENSG00000112081 534.24 1364.10 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
96. GABARAP ENSG00000170296 531.40 1356.85 GABA type A receptor-associated protein [Source:HGNC Symbol;Acc:HGNC:4067]
97. PFN1 ENSG00000108518 531.40 1356.85 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
98. PCBP2 ENSG00000197111 527.15 1346.00 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
99. MARCKSL1 ENSG00000175130 524.32 1338.77 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
100. YBX1 ENSG00000065978 517.23 1320.67 Y-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8014]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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