Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s2.

Sample reads: 391,647. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 7462.59 19054.38 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 5144.29 13135.02 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPL41 ENSG00000229117 3899.78 9957.39 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
4. RPS20 ENSG00000008988 3897.53 9951.64 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
5. RPL5 ENSG00000122406 2641.78 6745.31 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
6. TUBA1B ENSG00000123416 2154.31 5500.64 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
7. ACTG1 ENSG00000184009 2127.36 5431.83 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
8. RPL15 ENSG00000174748 1925.18 4915.60 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
9. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1911.70 4881.18 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
10. RPS6 ENSG00000137154 1898.22 4846.76 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
11. RPL13AP20 ENSG00000234498 1880.25 4800.88 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
12. RPS5 ENSG00000083845 1855.54 4737.79 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
13. RPL18A ENSG00000105640 1846.55 4714.83 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
14. PPIA ENSG00000196262 1826.34 4663.23 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
15. RPL9 ENSG00000163682 1740.97 4445.25 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
16. RPS23 ENSG00000186468 1671.33 4267.44 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
17. RPL23 ENSG00000125691 1626.41 4152.75 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
18. RPS11 ENSG00000142534 1599.45 4083.91 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
19. RPS27A ENSG00000143947 1563.51 3992.14 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
20. VIM ENSG00000026025 1556.77 3974.93 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
21. RPS27 ENSG00000177954 1545.53 3946.23 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
22. RPL10A ENSG00000198755 1527.56 3900.35 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
23. RPL31 ENSG00000071082 1498.36 3825.79 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
24. RPS12 ENSG00000112306 1462.42 3734.03 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
25. ACTB ENSG00000075624 1439.95 3676.65 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
26. RPL37 ENSG00000145592 1421.98 3630.77 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
27. RPS15A ENSG00000134419 1388.28 3544.72 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
28. STMN1 ENSG00000117632 1370.31 3498.84 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
29. RPL34 ENSG00000109475 1325.39 3384.14 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
30. GAPDH ENSG00000111640 1291.69 3298.10 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
31. RPL13 ENSG00000167526 1280.46 3269.42 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
32. RPLP1 ENSG00000137818 1249.01 3189.12 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
33. RPL10 ENSG00000147403 1163.64 2971.15 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
34. MDK ENSG00000110492 1154.66 2948.22 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
35. GNAS ENSG00000087460 1141.18 2913.80 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
36. CKB ENSG00000166165 1132.19 2890.84 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
37. MTRNR2L8 ENSG00000255823 1060.31 2707.31 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
38. RPL29 ENSG00000162244 1033.35 2638.47 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
39. RPS13 ENSG00000110700 1019.87 2604.05 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
40. RPS8 ENSG00000142937 1010.89 2581.13 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
41. RPS25 ENSG00000118181, ENSG00000280831 1001.90 2558.17 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
42. RPL35 ENSG00000136942 968.21 2472.15 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
43. RPS2 ENSG00000140988 968.21 2472.15 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
44. RPL37A ENSG00000197756 943.49 2409.03 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
45. UBB ENSG00000170315 930.02 2374.64 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
46. RPL3 ENSG00000100316 898.57 2294.34 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
47. RPS21 ENSG00000171858 894.07 2282.85 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
48. HSP90AB1 ENSG00000096384 889.58 2271.38 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
49. TPT1 ENSG00000133112 887.33 2265.64 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
50. RPL6 ENSG00000089009 853.64 2179.62 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
51. RPS7 ENSG00000171863 849.15 2168.15 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
52. RPS15 ENSG00000115268 844.65 2156.66 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
53. RPS3A ENSG00000145425 837.91 2139.45 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
54. RPS16 ENSG00000105193 828.93 2116.52 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
55. RPL39 ENSG00000198918 741.32 1892.83 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
56. RPS29 ENSG00000213741 730.09 1864.15 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
57. HNRNPC ENSG00000092199 723.35 1846.94 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
58. RPL26 ENSG00000161970 718.85 1835.45 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
59. UBA52 ENSG00000221983 718.85 1835.45 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
60. RPL11 ENSG00000142676 712.11 1818.24 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
61. RPS28 ENSG00000233927 712.11 1818.24 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
62. MTRNR2L1 ENSG00000256618 705.37 1801.04 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
63. NGFRAP1 NGFRAP1 705.37 1801.04
64. RBM3 ENSG00000102317 700.88 1789.57 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
65. CFL1 ENSG00000172757 691.90 1766.64 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
66. RPL35A ENSG00000182899 685.16 1749.43 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
67. ATP5G2 678.42 1732.22 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
68. RPL4 ENSG00000174444 678.42 1732.22 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
69. RPL7A ENSG00000148303, ENSG00000280858 678.42 1732.22 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
70. MAP1B ENSG00000131711 676.17 1726.48 microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
71. EIF4G2 ENSG00000110321 667.19 1703.55 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
72. TUBB3 ENSG00000258947 662.69 1692.06 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
73. RPS14 ENSG00000164587 651.46 1663.39 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
74. RPS24 ENSG00000138326 651.46 1663.39 ribosomal protein S24 [Source:HGNC Symbol;Acc:HGNC:10411]
75. GABARAP ENSG00000170296 631.24 1611.76 GABA type A receptor-associated protein [Source:HGNC Symbol;Acc:HGNC:4067]
76. RPLP0 ENSG00000089157 629.00 1606.04 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
77. SOX2 ENSG00000181449 622.26 1588.83 SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
78. MARCKS ENSG00000277443 613.27 1565.87 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
79. HNRNPD ENSG00000138668 611.03 1560.16 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
80. ZIC1 ENSG00000152977 606.53 1548.67 Zic family member 1 [Source:HGNC Symbol;Acc:HGNC:12872]
81. PFN2 ENSG00000070087 595.30 1519.99 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
82. RPL32 ENSG00000144713 588.56 1502.78 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
83. HNRNPA1 ENSG00000135486 586.31 1497.04 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
84. NNAT ENSG00000053438 584.07 1491.32 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
85. NPM1 ENSG00000181163 581.82 1485.57 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
86. DDX17 ENSG00000100201 575.08 1468.36 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
87. H2AFZ ENSG00000164032 575.08 1468.36 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
88. HSPA8 ENSG00000109971 572.84 1462.64 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
89. CD24 ENSG00000272398 566.10 1445.43 CD24 molecule [Source:HGNC Symbol;Acc:HGNC:1645]
90. HNRNPH1 ENSG00000169045, ENSG00000284254 561.60 1433.94 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
91. TUBB2B ENSG00000137285 552.62 1411.02 tubulin beta 2B class IIb [Source:HGNC Symbol;Acc:HGNC:30829]
92. ENO1 ENSG00000074800 548.13 1399.55 enolase 1 [Source:HGNC Symbol;Acc:HGNC:3350]
93. SRSF3 ENSG00000112081 548.13 1399.55 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
94. RPL12 ENSG00000197958 543.63 1388.06 ribosomal protein L12 [Source:HGNC Symbol;Acc:HGNC:10302]
95. HNRNPA2B1 ENSG00000122566 536.89 1370.85 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:HGNC Symbol;Acc:HGNC:5033]
96. RPL17 ENSG00000265681 532.40 1359.39 ribosomal protein L17 [Source:HGNC Symbol;Acc:HGNC:10307]
97. RPL18 ENSG00000063177 527.91 1347.92 ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:10310]
98. RPL38 ENSG00000172809 527.91 1347.92 ribosomal protein L38 [Source:HGNC Symbol;Acc:HGNC:10349]
99. PCBP2 ENSG00000197111 523.41 1336.43 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
100. RPLP2 ENSG00000177600 518.92 1324.97 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA