Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s18.

Sample reads: 391,654. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 8694.13 22198.61 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 4505.79 11504.57 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. ACTG1 ENSG00000184009 2788.99 7121.09 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
4. RPL41 ENSG00000229117 2484.50 6343.64 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
5. ACTB ENSG00000075624 2273.95 5806.05 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
6. RPS20 ENSG00000008988 2160.58 5516.58 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
7. TUBB3 ENSG00000258947 2113.61 5396.65 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
8. RPL5 ENSG00000122406 2111.99 5392.52 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
9. PPIA ENSG00000196262 2082.83 5318.06 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
10. STMN1 ENSG00000117632 1979.18 5053.41 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
11. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1898.20 4846.65 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
12. RPL15 ENSG00000174748 1831.79 4677.09 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
13. TUBA1B ENSG00000123416 1822.07 4652.27 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
14. RPS6 ENSG00000137154 1710.32 4366.94 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
15. GNAS ENSG00000087460 1546.74 3949.27 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
16. GAPDH ENSG00000111640 1499.77 3829.34 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
17. RPL9 ENSG00000163682 1423.65 3634.99 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
18. RPS5 ENSG00000083845 1389.64 3548.15 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
19. RPL18A ENSG00000105640 1311.89 3349.63 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
20. RPS23 ENSG00000186468 1230.91 3142.87 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
21. RPS12 ENSG00000112306 1177.47 3006.42 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
22. RPL34 ENSG00000109475 1162.89 2969.19 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
23. VIM ENSG00000026025 1158.03 2956.78 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
24. NNAT ENSG00000053438 1136.97 2903.01 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
25. RPS11 ENSG00000142534 1122.40 2865.81 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
26. RPL10A ENSG00000198755 1119.16 2857.54 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
27. RPL23 ENSG00000125691 1101.34 2812.04 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
28. HSP90AB1 ENSG00000096384 1091.63 2787.24 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
29. RPS27A ENSG00000143947 1064.09 2716.93 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
30. RPL37 ENSG00000145592 1049.51 2679.70 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
31. MTRNR2L8 ENSG00000255823 1034.94 2642.50 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
32. RPL13 ENSG00000167526 1031.70 2634.23 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
33. RPLP1 ENSG00000137818 997.69 2547.39 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
34. MAP1B ENSG00000131711 960.44 2452.28 microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
35. RPS13 ENSG00000110700 949.10 2423.32 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
36. RPL13AP20 ENSG00000234498 944.24 2410.92 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
37. RPL10 ENSG00000147403 941.00 2402.64 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
38. RPS15A ENSG00000134419 913.47 2332.35 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
39. NGFRAP1 NGFRAP1 881.07 2249.62
40. MTRNR2L1 ENSG00000256618 850.30 2171.06 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
41. CFL1 ENSG00000172757 845.44 2158.65 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
42. RPL6 ENSG00000089009 840.58 2146.24 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
43. RPS8 ENSG00000142937 837.34 2137.97 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
44. EIF4G2 ENSG00000110321 834.11 2129.72 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
45. RPS2 ENSG00000140988 827.63 2113.18 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
46. RPS27 ENSG00000177954 826.01 2109.04 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
47. TPT1 ENSG00000133112 824.39 2104.90 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
48. CD24 ENSG00000272398 808.19 2063.54 CD24 molecule [Source:HGNC Symbol;Acc:HGNC:1645]
49. MDK ENSG00000110492 798.47 2038.72 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
50. RBM3 ENSG00000102317 780.66 1993.25 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
51. TUBA1A ENSG00000167552 775.80 1980.84 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
52. RPS3A ENSG00000145425 761.22 1943.61 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
53. TUBB2B ENSG00000137285 759.60 1939.48 tubulin beta 2B class IIb [Source:HGNC Symbol;Acc:HGNC:30829]
54. RPL3 ENSG00000100316 745.03 1902.28 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
55. MARCKS ENSG00000277443 727.21 1856.78 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
56. RPL37A ENSG00000197756 723.97 1848.50 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
57. RPS25 ENSG00000118181, ENSG00000280831 702.92 1794.76 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
58. CKB ENSG00000166165 689.96 1761.67 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
59. RPL35 ENSG00000136942 680.24 1736.85 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
60. UBB ENSG00000170315 675.38 1724.44 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
61. RPL11 ENSG00000142676 668.90 1707.89 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
62. RPL31 ENSG00000071082 664.04 1695.48 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
63. SOX4 ENSG00000124766 655.95 1674.83 SRY-box 4 [Source:HGNC Symbol;Acc:HGNC:11200]
64. RPS21 ENSG00000171858 647.85 1654.15 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
65. RPL29 ENSG00000162244 638.13 1629.33 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
66. HNRNPD ENSG00000138668 636.51 1625.19 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
67. HNRNPC ENSG00000092199 634.89 1621.06 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
68. RPL7A ENSG00000148303, ENSG00000280858 633.27 1616.92 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
69. RPS15 ENSG00000115268 633.27 1616.92 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
70. PFN2 ENSG00000070087 623.55 1592.10 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
71. RPLP0 ENSG00000089157 621.93 1587.97 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
72. HNRNPH1 ENSG00000169045, ENSG00000284254 618.70 1579.72 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
73. MARCKSL1 ENSG00000175130 610.60 1559.04 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
74. RPS29 ENSG00000213741 604.12 1542.49 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
75. ATP5G2 602.50 1538.36 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
76. RPS14 ENSG00000164587 592.78 1513.54 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
77. RPL14 ENSG00000188846 591.16 1509.40 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
78. HNRNPA1 ENSG00000135486 589.54 1505.26 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
79. YWHAZ ENSG00000164924 583.06 1488.72 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:HGNC Symbol;Acc:HGNC:12855]
80. RPL32 ENSG00000144713 579.82 1480.45 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
81. YBX1 ENSG00000065978 578.20 1476.31 Y-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8014]
82. HBE1 ENSG00000213931 576.59 1472.20 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
83. INA ENSG00000148798 576.59 1472.20 internexin neuronal intermediate filament protein alpha [Source:HGNC Symbol;Acc:HGNC:6057]
84. SST ENSG00000157005 576.59 1472.20 somatostatin [Source:HGNC Symbol;Acc:HGNC:11329]
85. H2AFZ ENSG00000164032 571.73 1459.79 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
86. ENO1 ENSG00000074800 570.11 1455.65 enolase 1 [Source:HGNC Symbol;Acc:HGNC:3350]
87. DPYSL2 ENSG00000092964 568.49 1451.52 dihydropyrimidinase like 2 [Source:HGNC Symbol;Acc:HGNC:3014]
88. HSPA8 ENSG00000109971 568.49 1451.52 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
89. RPS7 ENSG00000171863 563.63 1439.11 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
90. RPS16 ENSG00000105193 558.77 1426.70 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
91. SRSF3 ENSG00000112081 558.77 1426.70 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
92. PCBP2 ENSG00000197111 553.91 1414.29 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
93. SRP14 ENSG00000140319 552.29 1410.15 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
94. RPS28 ENSG00000233927 547.43 1397.75 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
95. SERF2 ENSG00000140264 542.57 1385.34 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
96. PFN1 ENSG00000108518 540.95 1381.20 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
97. MORF4L1 ENSG00000185787 539.33 1377.06 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
98. NREP ENSG00000134986 531.24 1356.41 neuronal regeneration related protein [Source:HGNC Symbol;Acc:HGNC:16834]
99. RPL39 ENSG00000198918 531.24 1356.41 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
100. RPL35A ENSG00000182899 523.14 1335.73 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA