Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s14.

Sample reads: 391,650. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 8730.94 22292.72 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 4294.90 10966.18 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPL41 ENSG00000229117 3321.66 8481.20 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
4. RPS20 ENSG00000008988 2920.85 7457.81 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
5. ACTG1 ENSG00000184009 2722.14 6950.44 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
6. RPL5 ENSG00000122406 2453.42 6264.32 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
7. TUBA1B ENSG00000123416 2183.58 5575.34 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
8. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2095.52 5350.49 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
9. RPL15 ENSG00000174748 1997.29 5099.68 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
10. STMN1 ENSG00000117632 1987.13 5073.74 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
11. ACTB ENSG00000075624 1925.03 4915.18 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
12. PPIA ENSG00000196262 1843.74 4707.62 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
13. RPL13AP20 ENSG00000234498 1778.25 4540.41 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
14. RPL18A ENSG00000105640 1689.06 4312.68 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
15. RPS23 ENSG00000186468 1603.25 4093.58 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
16. GNAS ENSG00000087460 1570.51 4009.99 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
17. RPS6 ENSG00000137154 1563.73 3992.67 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
18. GAPDH ENSG00000111640 1516.31 3871.60 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
19. RPL9 ENSG00000163682 1489.22 3802.43 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
20. RPS12 ENSG00000112306 1447.44 3695.75 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
21. RPS5 ENSG00000083845 1357.12 3465.14 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
22. TUBB3 ENSG00000258947 1352.60 3453.60 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
23. RPL37 ENSG00000145592 1339.05 3419.00 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
24. RPS27A ENSG00000143947 1283.73 3277.75 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
25. RPL23 ENSG00000125691 1253.24 3199.90 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
26. RPS11 ENSG00000142534 1235.18 3153.79 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
27. RPL10A ENSG00000198755 1234.05 3150.90 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
28. RPL31 ENSG00000071082 1234.05 3150.90 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
29. NNAT ENSG00000053438 1230.66 3142.25 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
30. VIM ENSG00000026025 1176.47 3003.88 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
31. RPLP1 ENSG00000137818 1160.66 2963.52 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
32. HSP90AB1 ENSG00000096384 1125.66 2874.15 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
33. RPL34 ENSG00000109475 1098.56 2804.96 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
34. RPL13 ENSG00000167526 1073.73 2741.56 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
35. RPS15A ENSG00000134419 1055.66 2695.42 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
36. RPS8 ENSG00000142937 1044.37 2666.59 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
37. RPS27 ENSG00000177954 1039.85 2655.05 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
38. RPS2 ENSG00000140988 983.40 2510.92 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
39. TPT1 ENSG00000133112 952.92 2433.09 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
40. NGFRAP1 NGFRAP1 946.14 2415.78
41. RPL10 ENSG00000147403 906.63 2314.90 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
42. MTRNR2L8 ENSG00000255823 871.63 2225.53 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
43. RPL7A ENSG00000148303, ENSG00000280858 871.63 2225.53 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
44. MDK ENSG00000110492 837.75 2139.03 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
45. MTRNR2L1 ENSG00000256618 829.85 2118.86 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
46. RPL6 ENSG00000089009 812.92 2075.63 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
47. RPL37A ENSG00000197756 802.75 2049.66 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
48. RPS7 ENSG00000171863 799.37 2041.03 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
49. RPS25 ENSG00000118181, ENSG00000280831 795.98 2032.38 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
50. RPL3 ENSG00000100316 784.69 2003.55 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
51. RPS3A ENSG00000145425 779.04 1989.12 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
52. MAP1B ENSG00000131711 771.14 1968.95 microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
53. RPS13 ENSG00000110700 759.85 1940.13 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
54. RPS16 ENSG00000105193 744.04 1899.76 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
55. RPL35 ENSG00000136942 737.27 1882.47 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
56. RBM3 ENSG00000102317 722.59 1844.99 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
57. UBB ENSG00000170315 716.95 1830.59 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
58. HNRNPC ENSG00000092199 715.82 1827.70 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
59. NPM1 ENSG00000181163 713.56 1821.93 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
60. RPS21 ENSG00000171858 710.17 1813.28 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
61. RPLP0 ENSG00000089157 704.53 1798.88 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
62. HNRNPD ENSG00000138668 692.11 1767.17 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
63. CFL1 ENSG00000172757 688.72 1758.51 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
64. RPS15 ENSG00000115268 663.88 1695.09 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
65. RPL14 ENSG00000188846 662.75 1692.20 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
66. RPL11 ENSG00000142676 658.24 1680.69 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
67. CD24 ENSG00000272398 654.85 1672.03 CD24 molecule [Source:HGNC Symbol;Acc:HGNC:1645]
68. H2AFZ ENSG00000164032 642.43 1640.32 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
69. YBX1 ENSG00000065978 640.17 1634.55 Y-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8014]
70. EIF4G2 ENSG00000110321 637.91 1628.78 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
71. RPL4 ENSG00000174444 636.78 1625.89 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
72. CKB ENSG00000166165 635.65 1623.01 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
73. MARCKS ENSG00000277443 635.65 1623.01 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
74. HNRNPH1 ENSG00000169045, ENSG00000284254 631.14 1611.49 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
75. RPS28 ENSG00000233927 631.14 1611.49 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
76. RPL29 ENSG00000162244 626.62 1599.95 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
77. RPL39 ENSG00000198918 615.33 1571.12 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
78. TUBA1A ENSG00000167552 613.07 1565.35 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
79. HNRNPA1 ENSG00000135486 611.94 1562.47 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
80. GABARAP ENSG00000170296 604.04 1542.30 GABA type A receptor-associated protein [Source:HGNC Symbol;Acc:HGNC:4067]
81. SOX4 ENSG00000124766 604.04 1542.30 SRY-box 4 [Source:HGNC Symbol;Acc:HGNC:11200]
82. RPL26 ENSG00000161970 575.82 1470.24 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
83. RPS14 ENSG00000164587 565.65 1444.28 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
84. HSPA8 ENSG00000109971 564.52 1441.39 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
85. PFN2 ENSG00000070087 556.62 1421.22 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
86. RPS29 ENSG00000213741 556.62 1421.22 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
87. DDX17 ENSG00000100201 552.11 1409.70 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
88. ATP5G2 531.78 1357.79 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
89. HNRNPA2B1 ENSG00000122566 531.78 1357.79 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:HGNC Symbol;Acc:HGNC:5033]
90. DPYSL2 ENSG00000092964 527.27 1346.28 dihydropyrimidinase like 2 [Source:HGNC Symbol;Acc:HGNC:3014]
91. RPL32 ENSG00000144713 527.27 1346.28 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
92. TUBB2B ENSG00000137285 527.27 1346.28 tubulin beta 2B class IIb [Source:HGNC Symbol;Acc:HGNC:30829]
93. PFN1 ENSG00000108518 520.49 1328.97 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
94. CALM2 ENSG00000143933 519.36 1326.08 calmodulin 2 [Source:HGNC Symbol;Acc:HGNC:1445]
95. RPL35A ENSG00000182899 517.10 1320.31 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
96. SRP14 ENSG00000140319 509.20 1300.14 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
97. FTH1 ENSG00000167996 505.81 1291.49 ferritin heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:3976]
98. H3F3B ENSG00000132475 502.43 1282.86 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
99. SRSF3 ENSG00000112081 501.30 1279.97 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
100. MARCKSL1 ENSG00000175130 500.17 1277.08 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA