Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s13.

Sample reads: 391,640. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 9068.64 23155.58 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 4716.24 12042.30 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPL5 ENSG00000122406 2559.37 6535.01 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
4. RPL41 ENSG00000229117 2491.15 6360.82 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
5. ACTG1 ENSG00000184009 2400.19 6128.57 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
6. ACTB ENSG00000075624 2309.23 5896.31 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
7. TUBA1B ENSG00000123416 2031.80 5187.93 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
8. RPS6 ENSG00000137154 2026.12 5173.43 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
9. PPIA ENSG00000196262 1995.42 5095.04 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
10. RPL15 ENSG00000174748 1890.82 4827.96 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
11. STMN1 ENSG00000117632 1885.13 4813.43 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
12. RPS20 ENSG00000008988 1831.69 4676.98 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
13. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1728.23 4412.81 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
14. RPL9 ENSG00000163682 1652.05 4218.29 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
15. GNAS ENSG00000087460 1512.20 3861.20 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
16. VIM ENSG00000026025 1439.43 3675.39 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
17. TUBB3 ENSG00000258947 1423.51 3634.75 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
18. RPS12 ENSG00000112306 1417.83 3620.24 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
19. RPL18A ENSG00000105640 1399.64 3573.80 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
20. GAPDH ENSG00000111640 1388.27 3544.76 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
21. RPS5 ENSG00000083845 1373.49 3507.03 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
22. RPL23 ENSG00000125691 1348.47 3443.14 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
23. RPL37 ENSG00000145592 1343.92 3431.52 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
24. RPS23 ENSG00000186468 1324.59 3382.17 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
25. RPL31 ENSG00000071082 1323.46 3379.28 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
26. RPS11 ENSG00000142534 1280.25 3268.95 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
27. NNAT ENSG00000053438 1252.96 3199.27 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
28. RPL10A ENSG00000198755 1202.94 3071.55 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
29. RPS27A ENSG00000143947 1194.98 3051.22 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
30. RPLP1 ENSG00000137818 1136.99 2903.15 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
31. RPL34 ENSG00000109475 1133.58 2894.45 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
32. MDK ENSG00000110492 1059.68 2705.75 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
33. HSP90AB1 ENSG00000096384 1042.62 2662.19 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
34. RPL13 ENSG00000167526 1040.35 2656.40 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
35. RPS15A ENSG00000134419 1002.83 2560.59 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
36. RPS27 ENSG00000177954 984.63 2514.12 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
37. NGFRAP1 NGFRAP1 977.81 2496.71
38. RPS8 ENSG00000142937 975.54 2490.91 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
39. MTRNR2L8 ENSG00000255823 970.99 2479.29 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
40. RPL14 ENSG00000188846 963.03 2458.97 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
41. MTRNR2L1 ENSG00000256618 957.35 2444.47 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
42. RPL7A ENSG00000148303, ENSG00000280858 928.92 2371.87 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
43. RPS2 ENSG00000140988 873.21 2229.63 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
44. RPL6 ENSG00000089009 866.39 2212.21 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
45. RPS16 ENSG00000105193 841.37 2148.33 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
46. TPT1 ENSG00000133112 836.83 2136.74 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
47. RBM3 ENSG00000102317 818.63 2090.26 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
48. MAP1B ENSG00000131711 817.50 2087.38 microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
49. RPS3A ENSG00000145425 815.22 2081.56 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
50. CFL1 ENSG00000172757 809.54 2067.05 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
51. HNRNPC ENSG00000092199 797.03 2035.11 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
52. RPS25 ENSG00000118181, ENSG00000280831 795.89 2032.20 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
53. RPL10 ENSG00000147403 779.98 1991.58 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
54. UBB ENSG00000170315 743.59 1898.66 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
55. RPS13 ENSG00000110700 721.99 1843.51 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
56. MARCKS ENSG00000277443 719.72 1837.71 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
57. RPL11 ENSG00000142676 712.89 1820.27 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
58. CD24 ENSG00000272398 707.21 1805.77 CD24 molecule [Source:HGNC Symbol;Acc:HGNC:1645]
59. RPS21 ENSG00000171858 707.21 1805.77 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
60. RPL37A ENSG00000197756 699.25 1785.44 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
61. HNRNPD ENSG00000138668 695.84 1776.74 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
62. RPL35 ENSG00000136942 692.43 1768.03 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
63. RPLP0 ENSG00000089157 692.43 1768.03 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
64. TUBB2B ENSG00000137285 692.43 1768.03 tubulin beta 2B class IIb [Source:HGNC Symbol;Acc:HGNC:30829]
65. NPM1 ENSG00000181163 687.88 1756.41 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
66. CKB ENSG00000166165 682.19 1741.88 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
67. RPS7 ENSG00000171863 674.24 1721.58 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
68. RPS14 ENSG00000164587 662.87 1692.55 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
69. HNRNPH1 ENSG00000169045, ENSG00000284254 653.77 1669.32 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
70. RPS15 ENSG00000115268 653.77 1669.32 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
71. RPL3 ENSG00000100316 646.95 1651.90 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
72. EIF4G2 ENSG00000110321 644.67 1646.08 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
73. HNRNPA1 ENSG00000135486 638.99 1631.58 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
74. H2AFZ ENSG00000164032 628.76 1605.46 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
75. PFN2 ENSG00000070087 610.56 1558.98 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
76. RPS28 ENSG00000233927 606.02 1547.39 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
77. RPS29 ENSG00000213741 582.14 1486.42 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
78. FTH1 ENSG00000167996 574.18 1466.09 ferritin heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:3976]
79. TUBA1A ENSG00000167552 574.18 1466.09 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
80. MARCKSL1 ENSG00000175130 567.36 1448.68 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
81. DDX17 ENSG00000100201 563.95 1439.97 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
82. HSPA8 ENSG00000109971 563.95 1439.97 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
83. RPL4 ENSG00000174444 562.81 1437.06 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
84. RPL29 ENSG00000162244 553.71 1413.83 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
85. SRSF3 ENSG00000112081 550.30 1405.12 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
86. RPL32 ENSG00000144713 549.17 1402.23 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
87. RPL39 ENSG00000198918 549.17 1402.23 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
88. RPL13AP20 ENSG00000234498 534.39 1364.49 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
89. ATP5G2 529.84 1352.88 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
90. PCBP2 ENSG00000197111 527.56 1347.05 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
91. RAN ENSG00000132341 527.56 1347.05 RAN, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9846]
92. RPL26 ENSG00000161970 526.43 1344.17 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
93. YBX1 ENSG00000065978 525.29 1341.26 Y-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8014]
94. CALM2 ENSG00000143933 523.02 1335.46 calmodulin 2 [Source:HGNC Symbol;Acc:HGNC:1445]
95. SERF2 ENSG00000140264 523.02 1335.46 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
96. YWHAE ENSG00000108953, ENSG00000274474 521.88 1332.55 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon [Source:HGNC Symbol;Acc:HGNC:12851]
97. SRP14 ENSG00000140319 515.06 1315.14 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
98. RPL35A ENSG00000182899 509.37 1300.61 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
99. H3F3B ENSG00000132475 504.82 1288.99 H3 histone family member 3B [Source:HGNC Symbol;Acc:HGNC:4765]
100. HNRNPA2B1 ENSG00000122566 502.55 1283.20 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:HGNC Symbol;Acc:HGNC:5033]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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