Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s1.

Sample reads: 391,656. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 7573.75 19337.76 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 5310.55 13559.22 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPL41 ENSG00000229117 2807.88 7169.25 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
4. RPS20 ENSG00000008988 2624.75 6701.67 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
5. RPL5 ENSG00000122406 2404.07 6138.22 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
6. ACTG1 ENSG00000184009 2094.17 5346.96 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
7. TUBA1B ENSG00000123416 2042.52 5215.09 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
8. VIM ENSG00000026025 2000.26 5107.19 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
9. RPL37 ENSG00000145592 1915.74 4891.38 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
10. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1892.26 4831.43 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
11. RPS5 ENSG00000083845 1882.87 4807.46 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
12. RPS6 ENSG00000137154 1864.09 4759.51 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
13. RPL15 ENSG00000174748 1850.01 4723.56 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
14. PPIA ENSG00000196262 1840.61 4699.56 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
15. RPS27 ENSG00000177954 1821.83 4651.61 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
16. RPL23 ENSG00000125691 1788.96 4567.68 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
17. ACTB ENSG00000075624 1699.75 4339.90 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
18. RPL9 ENSG00000163682 1690.36 4315.93 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
19. RPS12 ENSG00000112306 1629.32 4160.08 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
20. RPS27A ENSG00000143947 1610.54 4112.13 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
21. RPL18A ENSG00000105640 1601.15 4088.15 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
22. RPS23 ENSG00000186468 1549.50 3956.28 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
23. RPS11 ENSG00000142534 1526.02 3896.33 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
24. RPL10A ENSG00000198755 1432.11 3656.55 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
25. RPL31 ENSG00000071082 1427.42 3644.58 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
26. STMN1 ENSG00000117632 1403.94 3584.62 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
27. RPLP1 ENSG00000137818 1324.12 3380.82 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
28. RPL34 ENSG00000109475 1310.03 3344.85 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
29. RPS15A ENSG00000134419 1291.25 3296.90 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
30. MDK ENSG00000110492 1187.95 3033.15 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
31. GNAS ENSG00000087460 1173.86 2997.17 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
32. RPL13 ENSG00000167526 1136.30 2901.27 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
33. RPS21 ENSG00000171858 1122.21 2865.29 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
34. CKB ENSG00000166165 1070.56 2733.42 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
35. MTRNR2L8 ENSG00000255823 1065.87 2721.44 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
36. GAPDH ENSG00000111640 1061.17 2709.44 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
37. RPS13 ENSG00000110700 1042.39 2661.49 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
38. RPS3A ENSG00000145425 1004.83 2565.59 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
39. MTRNR2L1 ENSG00000256618 953.18 2433.72 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
40. RPL6 ENSG00000089009 943.78 2409.72 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
41. RPS8 ENSG00000142937 943.78 2409.72 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
42. HSP90AB1 ENSG00000096384 934.39 2385.74 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
43. RPS16 ENSG00000105193 925.00 2361.77 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
44. TPT1 ENSG00000133112 915.61 2337.79 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
45. RPLP0 ENSG00000089157 892.13 2277.84 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
46. TUBB2B ENSG00000137285 873.35 2229.89 tubulin beta 2B class IIb [Source:HGNC Symbol;Acc:HGNC:30829]
47. RPL35 ENSG00000136942 868.66 2217.92 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
48. UBB ENSG00000170315 868.66 2217.92 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
49. RPS28 ENSG00000233927 863.96 2205.92 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
50. RPL7A ENSG00000148303, ENSG00000280858 859.27 2193.94 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
51. RPS25 ENSG00000118181, ENSG00000280831 859.27 2193.94 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
52. RPS2 ENSG00000140988 840.48 2145.96 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
53. ZIC1 ENSG00000152977 817.01 2086.04 Zic family member 1 [Source:HGNC Symbol;Acc:HGNC:12872]
54. RPL11 ENSG00000142676 812.31 2074.04 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
55. RPL10 ENSG00000147403 807.62 2062.06 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
56. RPS29 ENSG00000213741 807.62 2062.06 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
57. RPL29 ENSG00000162244 802.92 2050.06 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
58. CFL1 ENSG00000172757 798.23 2038.09 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
59. RPS7 ENSG00000171863 774.75 1978.14 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
60. NGFRAP1 NGFRAP1 765.36 1954.16
61. RPL37A ENSG00000197756 765.36 1954.16 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
62. MARCKS ENSG00000277443 760.66 1942.16 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
63. HNRNPC ENSG00000092199 755.97 1930.19 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
64. RPL26 ENSG00000161970 755.97 1930.19 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
65. TUBB3 ENSG00000258947 751.27 1918.19 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
66. RPS15 ENSG00000115268 746.58 1906.21 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
67. RPL14 ENSG00000188846 727.79 1858.24 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
68. RPL3 ENSG00000100316 727.79 1858.24 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
69. RPL39 ENSG00000198918 718.40 1834.26 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
70. RBM3 ENSG00000102317 694.93 1774.34 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
71. MAP1B ENSG00000131711 690.23 1762.34 microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
72. RPL38 ENSG00000172809 690.23 1762.34 ribosomal protein L38 [Source:HGNC Symbol;Acc:HGNC:10349]
73. RPS14 ENSG00000164587 685.53 1750.34 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
74. EIF4G2 ENSG00000110321 666.75 1702.39 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
75. ATP5G2 647.97 1654.44 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
76. UBA52 ENSG00000221983 643.28 1642.46 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
77. H2AFZ ENSG00000164032 638.58 1630.46 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
78. RPL35A ENSG00000182899 638.58 1630.46 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
79. HNRNPA1 ENSG00000135486 633.89 1618.49 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
80. RPL32 ENSG00000144713 633.89 1618.49 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
81. PCBP2 ENSG00000197111 624.49 1594.49 poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
82. NNAT ENSG00000053438 619.80 1582.51 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
83. RPL4 ENSG00000174444 615.10 1570.51 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
84. RPL17 ENSG00000265681 610.41 1558.54 ribosomal protein L17 [Source:HGNC Symbol;Acc:HGNC:10307]
85. NPM1 ENSG00000181163 605.71 1546.54 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
86. HNRNPH1 ENSG00000169045, ENSG00000284254 591.63 1510.59 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
87. PFN2 ENSG00000070087 586.93 1498.59 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
88. SOX2 ENSG00000181449 586.93 1498.59 SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
89. RPL18 ENSG00000063177 577.54 1474.61 ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:10310]
90. RPS24 ENSG00000138326 577.54 1474.61 ribosomal protein S24 [Source:HGNC Symbol;Acc:HGNC:10411]
91. SERF2 ENSG00000140264 563.45 1438.63 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
92. FTH1 ENSG00000167996 558.76 1426.66 ferritin heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:3976]
93. ENO1 ENSG00000074800 539.98 1378.71 enolase 1 [Source:HGNC Symbol;Acc:HGNC:3350]
94. HNRNPD ENSG00000138668 539.98 1378.71 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
95. DDX17 ENSG00000100201 525.89 1342.73 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
96. RPS19 ENSG00000105372 525.89 1342.73 ribosomal protein S19 [Source:HGNC Symbol;Acc:HGNC:10402]
97. SRSF2 ENSG00000161547 525.89 1342.73 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
98. SRSF3 ENSG00000112081 521.19 1330.73 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
99. RPL13AP20 ENSG00000234498 511.80 1306.76 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
100. CD24 ENSG00000272398 488.33 1246.83 CD24 molecule [Source:HGNC Symbol;Acc:HGNC:1645]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA