Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_posterior_slice_3, section s47.

Sample reads: 124,241. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 6592.38 53061.02
2. MT-CO3 MT-CO3 5578.16 44897.72
3. MT-CYB MT-CYB 3549.74 28571.29
4. MT-ND5 MT-ND5 3549.74 28571.29
5. MT-ND4 MT-ND4 3042.63 24489.65
6. EEF1A EEF1A 2535.53 20408.08
7. MT-ND1 MT-ND1 2028.42 16326.43
8. MT-ND3 MT-ND3 2028.42 16326.43
9. EIF2S1 ENSGALG00000009565 1521.32 12244.86 eukaryotic translation initiation factor 2 subunit alpha [Source:NCBI gene;Acc:423279]
10. ENSGALG00000028992 ENSGALG00000028992 1521.32 12244.86
11. MT-CO1 MT-CO1 1521.32 12244.86
12. MT-ND6 MT-ND6 1521.32 12244.86
13. RPL5 ENSGALG00000005922 1521.32 12244.86 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
14. CTNND2 ENSGALG00000013001 1014.21 8163.22 catenin delta 2 [Source:HGNC Symbol;Acc:HGNC:2516]
15. GAPDH ENSGALG00000014442 1014.21 8163.22 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
16. HMGB1 ENSGALG00000042875 1014.21 8163.22 high mobility group box 1 [Source:NCBI gene;Acc:395724]
17. LAP3 ENSGALG00000006334 1014.21 8163.22 leucine aminopeptidase 3 [Source:NCBI gene;Acc:425306]
18. LARP1B ENSGALG00000010207 1014.21 8163.22 La ribonucleoprotein domain family member 1B [Source:HGNC Symbol;Acc:HGNC:24704]
19. LSM7 ENSGALG00000000408 1014.21 8163.22 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420055]
20. MEIS2 ENSGALG00000039118 1014.21 8163.22 Meis homeobox 2 [Source:NCBI gene;Acc:395588]
21. MRPL17 ENSGALG00000002605 1014.21 8163.22 mitochondrial ribosomal protein L17 [Source:HGNC Symbol;Acc:HGNC:14053]
22. RPL15 ENSGALG00000011290 1014.21 8163.22 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
23. RPL27 ENSGALG00000002837 1014.21 8163.22 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
24. RPL31 ENSGALG00000016775 1014.21 8163.22 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
25. RPL7 ENSGALG00000035252 1014.21 8163.22 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
26. RPL7A ENSGALG00000003197 1014.21 8163.22 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
27. RPS20 ENSGALG00000014432 1014.21 8163.22 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
28. TAF3 ENSGALG00000006731 1014.21 8163.22 TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
29. gga-mir-3527 gga-mir-3527 1014.21 8163.22
30. ACO1 ENSGALG00000002162 507.11 4081.65 aconitase 1, soluble [Source:NCBI gene;Acc:373916]
31. ADAM9 ENSGALG00000003398 507.11 4081.65 ADAM metallopeptidase domain 9 [Source:NCBI gene;Acc:426781]
32. AKAP1 ENSGALG00000005575 507.11 4081.65 A-kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:367]
33. AKAP7 ENSGALG00000029794 507.11 4081.65 A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
34. ALDH1A2 ENSGALG00000004270 507.11 4081.65 aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
35. ANXA2 ENSGALG00000003770 507.11 4081.65 annexin A2 [Source:NCBI gene;Acc:396297]
36. ARF4 ENSGALG00000005622 507.11 4081.65 ADP ribosylation factor 4 [Source:HGNC Symbol;Acc:HGNC:655]
37. ASUN ASUN 507.11 4081.65
38. ATP1A1 ENSGALG00000032247 507.11 4081.65 ATPase Na+/K+ transporting subunit alpha 1 [Source:NCBI gene;Acc:396530]
39. ATP5C1 507.11 4081.65 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant X1
40. ATP5G3 507.11 4081.65 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
41. BAG2 ENSGALG00000026605 507.11 4081.65 BCL2 associated athanogene 2
42. BCCIP ENSGALG00000006617 507.11 4081.65 BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
43. BRIX1 ENSGALG00000003373 507.11 4081.65 BRX1, biogenesis of ribosomes [Source:NCBI gene;Acc:427433]
44. BTF3 ENSGALG00000013512 507.11 4081.65 basic transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:1125]
45. BUB3 ENSGALG00000009681 507.11 4081.65 BUB3, mitotic checkpoint protein [Source:NCBI gene;Acc:423949]
46. C1orf174 ENSGALG00000000975 507.11 4081.65 chromosome 1 open reading frame 174 [Source:HGNC Symbol;Acc:HGNC:27915]
47. C2orf47 C2orf47 507.11 4081.65
48. C4H4ORF52 C4H4ORF52 507.11 4081.65
49. CALM CALM 507.11 4081.65
50. CASC4 ENSGALG00000008208 507.11 4081.65 cancer susceptibility 4 [Source:NCBI gene;Acc:415575]
51. CCNYL1 ENSGALG00000008485 507.11 4081.65 cyclin Y like 1
52. CDH5 ENSGALG00000032349 507.11 4081.65 cadherin 5 [Source:NCBI gene;Acc:374068]
53. CLTC ENSGALG00000005139 507.11 4081.65 clathrin heavy chain [Source:NCBI gene;Acc:395272]
54. CNBP 507.11 4081.65 CCHC-type zinc finger nucleic acid binding protein, transcript variant X7
55. COPS4 ENSGALG00000011130 507.11 4081.65 COP9 signalosome subunit 4 [Source:NCBI gene;Acc:422594]
56. COPS5 ENSGALG00000030843 507.11 4081.65 COP9 signalosome subunit 5 [Source:NCBI gene;Acc:426579]
57. COX6A1 ENSGALG00000007205 507.11 4081.65 cytochrome c oxidase subunit 6A1 [Source:NCBI gene;Acc:416978]
58. COX6C ENSGALG00000035996 507.11 4081.65 cytochrome c oxidase subunit 6C [Source:NCBI gene;Acc:420243]
59. COX7A2 ENSGALG00000015906 507.11 4081.65 cytochrome c oxidase subunit 7A2 [Source:NCBI gene;Acc:772260]
60. CTNNB1 ENSGALG00000037203 507.11 4081.65 catenin beta 1 [Source:NCBI gene;Acc:395964]
61. CTPS1 ENSGALG00000042967 507.11 4081.65 CTP synthase 1 [Source:HGNC Symbol;Acc:HGNC:2519]
62. CTSO ENSGALG00000009373 507.11 4081.65 cathepsin O [Source:NCBI gene;Acc:422410]
63. DAK DAK 507.11 4081.65
64. DDX3X ENSGALG00000016231 507.11 4081.65 DEAD-box helicase 3 X-linked [Source:NCBI gene;Acc:418567]
65. DDX55 ENSGALG00000003298 507.11 4081.65 DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
66. DISP1 507.11 4081.65 dispatched RND transporter family member 1, transcript variant X3
67. DNAJC2 ENSGALG00000008249 507.11 4081.65 DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
68. DTD1 ENSGALG00000008808 507.11 4081.65 D-tyrosyl-tRNA deacylase 1 [Source:NCBI gene;Acc:416726]
69. EIF2B1 ENSGALG00000003259 507.11 4081.65 eukaryotic translation initiation factor 2B subunit alpha [Source:HGNC Symbol;Acc:HGNC:3257]
70. EIF4EBP1 ENSGALG00000003205 507.11 4081.65 eukaryotic translation initiation factor 4E binding protein 1 [Source:HGNC Symbol;Acc:HGNC:3288]
71. EIF4G2 ENSGALG00000005587 507.11 4081.65 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
72. EMC8 ENSGALG00000005744 507.11 4081.65 ER membrane protein complex subunit 8
73. ENGASE ENSGALG00000011816 507.11 4081.65 endo-beta-N-acetylglucosaminidase [Source:HGNC Symbol;Acc:HGNC:24622]
74. ENO1 ENSGALG00000002377 507.11 4081.65 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
75. ENSGALG00000002696 ENSGALG00000002696 507.11 4081.65
76. ENSGALG00000022570 ENSGALG00000022570 507.11 4081.65
77. EPCAM ENSGALG00000008969 507.11 4081.65 epithelial cell adhesion molecule [Source:NCBI gene;Acc:421292]
78. ESF1 ENSGALG00000034768 507.11 4081.65 ESF1 nucleolar pre-rRNA processing protein homolog [Source:NCBI gene;Acc:428551]
79. EXTL3 ENSGALG00000016630 507.11 4081.65 exostosin like glycosyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:3518]
80. FAF2 ENSGALG00000003331 507.11 4081.65 Fas associated factor family member 2 [Source:HGNC Symbol;Acc:HGNC:24666]
81. FBXO5 ENSGALG00000013607 507.11 4081.65 F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
82. FKBP4 ENSGALG00000014331 507.11 4081.65 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
83. FKBP9 ENSGALG00000037669 507.11 4081.65 FK506 binding protein 9 [Source:NCBI gene;Acc:395652]
84. GMPPA ENSGALG00000002417 507.11 4081.65 GDP-mannose pyrophosphorylase A, transcript variant X2
85. GOLGA2 ENSGALG00000004881 507.11 4081.65 golgin A2, transcript variant X7
86. GOLGA7 ENSGALG00000003483 507.11 4081.65 golgin A7 [Source:NCBI gene;Acc:426787]
87. GPR89 GPR89 507.11 4081.65
88. HAUS2 ENSGALG00000009111 507.11 4081.65 HAUS augmin like complex subunit 2 [Source:NCBI gene;Acc:423237]
89. HBG1 HBG1 507.11 4081.65
90. HBZ ENSGALG00000023740 507.11 4081.65 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
91. HDAC2 ENSGALG00000014991 507.11 4081.65 histone deacetylase 2 [Source:NCBI gene;Acc:395635]
92. HIGD2A ENSGALG00000003348 507.11 4081.65 HIG1 hypoxia inducible domain family member 2A
93. HMGN5 ENSGALG00000007131 507.11 4081.65 high mobility group nucleosome binding domain 5, transcript variant X1
94. HNRNPH3 ENSGALG00000003947 507.11 4081.65 heterogeneous nuclear ribonucleoprotein H3 [Source:NCBI gene;Acc:423686]
95. HNRNPM ENSGALG00000000377 507.11 4081.65 heterogeneous nuclear ribonucleoprotein M [Source:NCBI gene;Acc:420054]
96. ID2 ENSGALG00000035016 507.11 4081.65 inhibitor of DNA binding 2, HLH protein [Source:NCBI gene;Acc:395852]
97. JMJD1C ENSGALG00000002942 507.11 4081.65 jumonji domain containing 1C [Source:NCBI gene;Acc:423655]
98. KDM2B ENSGALG00000004225 507.11 4081.65 lysine demethylase 2B [Source:HGNC Symbol;Acc:HGNC:13610]
99. KRT19 ENSGALG00000019719 507.11 4081.65 keratin 19 [Source:NCBI gene;Acc:395861]
100. LSM1 ENSGALG00000003245 507.11 4081.65 LSM1 homolog, mRNA degradation associated [Source:HGNC Symbol;Acc:HGNC:20472]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA